Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	1	3218610	238929251	123939	0.014
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	1	238929525	238929915	2	-2.366
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	1	238930341	247813706	5191	-0.0409
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	2	484222	242476062	131289	0.034
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	3	2212571	144478613	79309	-0.0321
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	3	144482394	144482910	2	-1.9087
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	3	144486109	169564752	12726	-0.2025
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	3	169565571	188994213	10260	0.3623
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	3	188995631	188998499	2	-1.0212
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	3	188999030	197538677	4077	0.3476
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	4	1053934	188763651	102722	-0.1008
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	5	914233	166382106	92230	-0.0014
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	5	166385839	166677133	177	-0.4779
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	5	166682607	180360469	8083	-0.1282
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	1014281	1270673	252	0.3085
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	1272183	1366673	106	0.0248
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	1372136	1641325	174	-0.3412
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	1645553	2244828	398	-1e-04
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	2250883	2640997	294	-0.3073
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	2642381	3382319	561	0.0072
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	3385627	4182759	599	-0.3336
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	4183254	4504007	56	-0.0134
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	4515915	4805116	226	-0.3455
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	4808354	4876802	38	0.0251
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	4881615	4963177	86	-0.302
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	4963946	5899257	636	0.0993
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	5901353	6211377	284	-0.363
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	6217747	6594167	356	-0.0322
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	6594744	6819029	176	-0.3479
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	6819227	6986365	182	-0.0111
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	6986454	7047620	38	0.2631
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	7048606	7222813	101	-0.09
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	7225535	7535258	170	0.2241
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	7536052	7742484	198	-0.0525
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	7743663	7784234	30	-0.3712
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	7786413	10133585	1639	0.2102
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	10133838	10467101	255	-0.1294
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	10535663	11947955	926	0.2555
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	11951289	11987674	46	-0.0354
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	11989164	12593152	473	-0.3082
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	12593460	12703052	77	0.0183
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	12703852	14166170	1059	-0.3274
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	14167198	14179483	5	-0.0382
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	14180087	14329195	107	0.2865
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	14333787	14652168	268	0.0016
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	14653169	15214087	376	-0.3182
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	15215150	15835856	286	0.0292
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	15835987	15885498	47	-0.3988
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	15889722	16275204	267	0.0361
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	16275227	16872133	476	-0.3077
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	16872149	17898527	560	0.1266
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	17899696	17984652	48	-0.4409
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	17990278	18819634	632	-0.0399
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	18819800	19169642	266	0.307
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	19169718	19461554	218	0.0464
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	19461820	19905552	309	0.3295
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	19905961	20128557	186	0.0087
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	20128645	20812457	469	-0.3084
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	20812588	21315175	349	-0.0212
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	21331584	21548175	118	-0.3551
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	21553258	23180436	1215	0.123
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	23183437	23368977	127	-0.3062
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	23369433	24906669	1055	0.0402
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	24907550	25017127	89	-0.287
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	25020854	25151421	97	0.046
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	25155207	25739887	224	0.3172
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	25740329	26019212	197	-0.0111
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	26027420	27052882	381	-0.2805
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	27055229	29023214	669	0.0327
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	29031142	30204399	379	-0.318
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	30222020	30392248	88	0.0632
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	30392406	30415904	7	-0.4473
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	30416767	33163451	434	-0.2107
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	33164735	47499936	8679	0.0589
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	47502024	48513995	586	-0.2213
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	48514480	49676158	555	0.0948
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	49679390	50798693	630	-0.2415
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	50800308	51095527	177	0.1198
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	51097162	51142230	39	-0.2836
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	51142301	51215806	70	0.119
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	51220809	51383532	103	-0.2164
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	51383596	51802687	319	0.0778
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	51810196	52349344	357	-0.2356
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	52349822	52954194	396	0.0702
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	52955142	53472515	346	-0.2058
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	53476006	53538798	57	0.1229
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	53541316	53622715	71	-0.2738
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	53622843	53765948	99	0.1224
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	53769820	54141651	269	-0.2076
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	54141888	54288463	117	0.1277
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	54290821	55333589	614	-0.2175
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	55334571	70290348	5250	0.0766
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	6	70293201	170903919	58340	-0.2899
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	7	705284	158385118	81319	0.0842
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	8	617667	145232496	81520	0.0513
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	9	789932	38747688	23314	-0.3715
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	9	71039044	135219675	42213	0.0354
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	9	135222275	135235672	13	0.638
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	9	135238418	140938752	2460	0.0252
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	10	415240	135225087	80869	0.0801
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	11	456120	134142530	77241	0.0648
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	12	889902	32330415	18813	0.0561
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	12	32331195	32331669	2	-1.459
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	12	32336962	133161346	55119	0.1082
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	13	19450806	114987458	56640	0.0109
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	14	20501368	28779644	3940	0.078
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	14	28781526	28788889	2	-1.463
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	14	28791634	105988038	45498	0.0671
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	15	23687685	101884307	44524	-0.0607
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	16	653459	89379936	40798	0.0389
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	17	987221	8650958	3681	0.035
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	17	8650962	8652004	2	-1.5019
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	17	8652382	80917016	33303	0.043
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	18	329586	77109240	42661	0.0516
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	19	284018	30603643	10796	0.0381
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	19	30605959	41435630	6085	-0.3664
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	19	41435736	41436546	2	-2.0202
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	19	41437958	58878226	7055	-0.4375
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	20	455764	62219837	37284	0.0514
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	21	15347621	18057633	1659	-0.147
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	21	18057646	18057666	2	-1.8197
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	21	18061292	47678774	18916	-0.1063
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	22	17423930	49331012	16926	0.0262
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	3157107	38232351	15532	-0.156
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	38232584	38233956	2	-5.0399
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	38236446	53705365	6640	-0.1429
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	53706882	63893287	2216	0.2468
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	63893849	63894774	3	-3.1993
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	63897577	75518138	4221	0.2189
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	75523851	75527438	3	2.468
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	75530383	89573966	6238	0.2059
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	90785447	91603912	311	-0.2258
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	91606834	117246031	11438	0.209
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	117269582	117270297	2	-5.1921
PHYLE_p_TCGA_189_193_Rec_SNP_N_GenomeWideSNP_6_E05_932644	X	117272710	154905589	17032	-0.0159
