Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	51598	1500664	225	-0.0545
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	1617778	1677510	19	-0.8113
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	1677547	12805146	6293	-0.004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	12805572	13248629	25	-0.6037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	13249076	15362225	1406	-0.005
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	15362244	15362777	8	-0.8137
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	15362873	17067742	835	-0.0241
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	17076084	17150527	62	0.3234
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	17155012	25455928	5249	3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	25465715	25519533	27	-2.2069
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	25519573	72522941	28666	0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	72528701	72583721	55	0.3888
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	72583736	103979561	20039	4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	104023054	104027091	11	-0.9795
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	104041212	108712268	2960	-0.0085
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	108729983	108772442	8	-1.2294
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	108787296	109372700	337	0.0051
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	109376049	109376170	2	-1.6403
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	109405764	110047653	324	0.0295
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	110047796	110051758	4	-1.3445
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	110051759	112491849	1941	0.0079
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	112497488	112498520	17	0.731
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	112498535	173063028	23080	0.0031
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	173063179	173063956	7	-1.0958
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	173064008	192714857	13175	-0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	192718034	192721641	2	-2.3135
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	192723639	195079130	1546	0.0153
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	195079153	195082414	2	-2.2416
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	195083353	226797291	21111	0.0054
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	226798300	226807770	3	-1.6984
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	226858407	243703033	12517	0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	243703662	243713527	11	-4.3278
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	243716274	247191011	2199	0.0121
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	2784	6609451	5090	-0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	6611970	6619059	6	-1.3029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	6626173	34544573	18955	0.0071
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	34552819	34590561	46	-2.4041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	34590667	97213724	37035	0.0056
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	97217886	97240728	16	-0.794
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	97240900	97484644	25	-0.1894
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	97507179	97528621	9	1.0531
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	97533310	146581564	29479	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	146581653	146583404	17	0.9842
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	146594276	152495647	3507	0.006
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	152495943	152502110	2	-1.7755
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	152503150	159666866	4259	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	159668589	159669219	2	-2.5774
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	159671533	180126633	12683	0.0083
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	180126735	180130382	27	-0.8439
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	180133888	184502840	2756	-0.0046
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	184502917	184510560	12	-1.0496
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	184510686	185024921	392	0.0422
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	185025125	185028304	4	1.4572
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	185033764	242738129	35330	0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	35345	6621543	5826	0.0041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	6626128	6627676	17	-1.0095
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	6628068	68807382	41879	0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	68808441	68830103	17	0.715
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	68831448	100419653	15923	-0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	100420474	100431991	36	-0.5615
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	100431998	131237039	18704	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	131237295	131288926	58	-0.3309
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	131289614	134507557	2125	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	134507572	134515404	11	0.6302
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	134515582	137501789	1889	-0.0092
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	137505641	137508116	2	-2.3998
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	137521231	142025229	2691	-0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	142028391	142029674	2	-3.416
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	142043308	164197211	13663	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	164200421	164202256	2	-3.4979
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	164208853	170212874	3359	0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	170216096	170221322	2	-2.8585
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	170222521	190843448	13199	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	190846372	190847332	11	-1.1348
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	190853682	194360596	2493	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	194360656	194365582	18	-1.0005
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	194365597	196941611	1514	-0.0058
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	196941627	196959853	12	0.7226
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	196960434	199380515	1171	-0.0106
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	2281	34455449	22793	0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	34462895	34506344	42	0.691
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	34506399	47952372	8585	-0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	47954582	47954682	2	2.5321
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	47954760	49205156	387	-0.0176
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	49205959	49352980	15	-0.6573
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	49353369	68902978	10441	-0.0045
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	68909443	68943146	5	1.2349
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	68964800	68970737	5	-2.2314
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	68977394	70424305	572	0.0118
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	70424450	70425368	2	-3.5416
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	70426477	115393149	27174	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	115394772	115403771	28	0.8402
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	115403829	116385317	606	0.0061
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	116385553	116392718	11	-1.0698
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	116394703	162093375	27370	-0.0031
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	162093390	162104573	30	-0.5021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	162104615	172611459	6656	0.0049
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	172611524	172614299	9	1.8114
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	172616946	173659097	639	-0.0129
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	173661522	173665218	7	1.1905
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	173677707	190426037	11469	-0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	190432112	190432656	3	-2.5817
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	190436258	191261904	385	-0.0748
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	68532	21412601	15691	-0.0056
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21413596	21413610	2	-2.6726
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21421823	21485033	45	-0.0214
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21486957	21488195	5	-2.1228
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21488253	27561271	3546	-0.0059
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	27561664	27561777	8	-2.3368
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	27563236	57357403	16514	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	57361784	57367832	20	1.8627
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	57368032	103879120	26816	0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	103888272	103888503	4	2.4095
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	103888948	180722926	50205	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	94661	26840370	20246	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	26840385	26906279	33	0.3665
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	26907477	29945051	1426	-0.0179
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	29945166	29957246	16	-1.3797
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	29958175	32732569	1241	-0.0137
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32733073	32734596	4	-2.3779
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32758590	32794174	37	-0.0437
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32796593	32796831	3	2.0818
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32797302	54039110	13673	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	54039189	54039814	4	-2.6492
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	54043307	57438279	2020	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	57438842	57531145	46	-0.3529
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	57542854	69743350	5282	-0.0075
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	69744419	69748089	4	-1.1546
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	69754127	77071668	4621	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77073620	77073646	3	1.1875
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77073713	77496587	297	0.0187
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77496767	77509408	19	-0.9477
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77509476	134307961	35639	-0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	134310764	134311325	2	-2.3004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	134313765	170892930	25110	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	7	52911	158819765	98312	-8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	21254	583041	326	-0.0413
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	584944	585908	10	-0.9916
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	591043	6827707	7381	-0.0041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	6846225	6865598	5	-1.2534
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	6866263	6975878	70	0.0062
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	6976336	8129435	262	-0.3435
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	8130592	12242560	3229	-0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	12242625	12587104	122	-0.5819
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	12593116	25028104	10386	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	25030360	25040167	26	-0.8342
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	25047021	39349816	9011	-0.0051
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	39354760	39506122	56	-2.6434
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	39507456	40302954	587	-0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	40302956	40308668	33	-3.2794
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	40312067	65011190	13000	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	65011451	65012064	7	1.0186
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	65012277	72377865	4232	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	72377918	72379153	8	-1.0689
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	72382417	123580428	31261	0.0038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	123580833	123641061	56	-0.9819
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	123643251	146268959	15661	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	36587	43177963	31295	-2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	43255666	43720905	38	-1.4523
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	43730342	44181813	30	-0.2367
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	44183430	44569219	21	-0.8811
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	44667855	44815938	39	0.417
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	44828123	140211215	48251	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	62809	12203863	10188	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	12206003	12209518	2	2.0564
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	12217003	17934982	4652	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	17967560	17989863	3	-1.3796
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	18011822	24412763	4347	0.0089
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	24415269	24418060	12	0.9491
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	24418914	46440182	12367	0.0047
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	46442417	47931064	318	0.3682
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	47932453	135356694	58958	0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	188510	18897446	12710	-1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	18905648	18918564	56	-1.2009
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	18918592	54722184	21566	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	54726437	54793048	13	-0.7571
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	54795833	55119916	194	-0.0214
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	55130608	55204041	55	0.7016
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	55209110	134449982	52290	1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	20703	8450059	5602	0.0052
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	8450080	8472408	18	-0.5096
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	8475939	30126848	14881	0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	30130534	30135200	26	-0.6037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	30135217	37763594	3796	0.0107
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	37767828	37769380	5	-1.2369
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	37774315	44186092	4094	0.0066
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	44190705	44195804	4	-2.4448
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	44199559	76422692	19576	-0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	76422987	76423002	2	2.7827
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	76423015	132288262	36772	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	17924949	23933607	4041	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	23937590	23937598	3	-1.8814
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	23937678	36973965	9487	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	36974267	36982732	11	0.9625
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	36982757	56804649	12614	0.0057
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	56804958	56805841	2	2.1368
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	56808195	97325275	25831	0.004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	97328125	97329466	6	-1.1496
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	97331831	114126499	12143	0.0093
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	18072124	18627041	40	-0.0398
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	18632139	18866184	20	0.7881
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	18871755	19045977	12	0.0856
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	19080913	19493212	118	0.9464
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	19494766	46702666	17094	-0.0072
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	46704517	46704593	2	-1.9055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	46705418	73076460	16935	-0.0011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	73076604	73090732	7	-2.4146
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	73099653	95101751	14598	0.004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	95101805	95102041	2	-2.0567
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	95102333	97222866	1578	-0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	97223459	97224808	8	-1.221
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	97226342	105530197	4542	0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	105531044	105613322	34	-0.405
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	105618359	106356482	425	0.0335
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	18276341	18700552	68	-0.0616
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	18706152	20232440	353	-0.6117
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	20232614	28289571	4680	-0.0083
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	28289587	28864774	147	-0.6423
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	28864940	30230756	983	-1.0543
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	30231347	30299512	19	-0.7278
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	30318608	30644774	46	-0.3708
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	30647150	32254964	1336	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	32255098	32256427	2	-1.754
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	32257251	37840922	3990	-0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	37845384	37845785	2	-1.8073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	37846167	54385733	9752	-4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	54386069	54388131	2	-1.8807
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	54390472	95609413	27096	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	95618796	95633191	11	-0.8404
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	95634653	100286563	3418	-0.0045
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	777	16492765	11763	-0.0068
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	16500214	16560200	8	1.0803
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	16564476	18163425	999	-0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	18169674	18676194	38	0.3813
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	18678347	19965401	780	-0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	19966274	19966317	2	-1.6259
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	19966584	22338871	1217	-0.0132
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	22349475	22618243	75	-0.4513
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	22620480	34317102	5609	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	34317210	34613067	168	0.4999
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	34614572	53689707	5968	-0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	53693360	53694317	2	-2.0006
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	53694406	88815036	25727	-0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	526	8183635	4532	-0.0091
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	8188272	8188458	2	-3.0427
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	8190183	18296117	6873	-0.0052
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	18299671	18405946	28	-1.7662
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	18409922	18906254	175	-0.0058
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	18944146	18956377	3	-1.2488
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	18970881	20336479	651	0.0056
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	20350823	20354038	2	-1.9553
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	20371772	22797056	970	-0.0121
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	22799022	22803217	3	-1.6353
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	22805020	36675211	7659	-0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	36675234	36684057	25	-1.553
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	36686250	41518916	2503	-0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	41521621	41636453	96	0.6084
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	41639153	41644307	4	1.5493
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	41644356	41719947	24	0.5971
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	41750187	69488281	16950	0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	69488549	69491674	3	-1.7984
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	69496127	74875108	3017	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	74877129	74900696	19	0.7112
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	74912218	78643088	1612	-0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	18	1543	76116029	50676	0
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	41910	14899939	6112	-0.0079
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	14906192	14910299	3	-1.8497
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	14912287	20538030	2930	-0.0046
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	20550917	20551698	2	-2.222
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	20556970	40547883	7726	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	40547921	40553688	18	-0.6816
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	40558584	56024079	7528	9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	56024198	56025050	5	-1.1639
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	56031019	58210326	1503	-0.0153
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	58210559	58246052	23	0.513
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	58246131	60200517	1193	-0.0182
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	60201119	60201500	2	-1.8665
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	60201677	60974181	361	-0.0078
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	60974347	60978105	4	1.2578
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	60980753	63632326	1790	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	63635220	63636187	2	-1.5348
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	63637868	63789666	51	0.0256
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	20	9305	1508922	1202	0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	20	1508951	1547002	42	1.2755
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	20	1547061	62426597	41121	-5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	9758742	9965425	35	-0.3989
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	9975295	44846957	23088	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	44848001	44848096	3	-2.1261
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	44848141	46921385	1221	0.0196
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	14432528	14532285	19	0.5238
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	14585766	15875551	355	-0.0402
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	15879034	15879508	2	1.7183
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	15879890	18710744	1766	-0.0142
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	18777856	18879111	5	1.0725
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	18992706	19795493	694	-0.0572
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	19795630	20139185	27	0.3675
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	20145866	20170765	19	1.1401
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	20171832	20712276	267	-0.0304
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	20712330	20716829	4	1.0098
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	20718086	21592981	747	-0.0358
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	21593242	21593257	2	-2.5308
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	21593274	22667949	698	-0.0107
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	22674422	22726814	20	0.7395
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	22731529	37681412	10836	-0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	37693565	37725244	32	-0.6298
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	37725327	49581321	7998	-0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	108477	62374362	33750	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	62387177	62410303	14	0.7896
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	62410386	76266264	6284	-0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	76270041	76461534	19	-0.8842
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	76462887	111598023	18687	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	111604569	111629152	15	-1.0519
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	111629433	117374072	3415	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	117374325	117378480	3	-1.5211
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	117380080	150043556	19792	0.0016
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	150044592	150046117	2	-2.6863
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	150047213	154835548	2428	-0.0062
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	2710438	6161425	834	-2.9128
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	6167901	6387325	98	-4.2132
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	6387861	8412852	1086	-3.367
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	8413707	10273128	500	-3.7641
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	10274073	14099670	991	-3.3011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	14099736	14103917	3	-7.5522
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	14104283	18084284	2070	-3.3788
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	18085938	19484001	665	-3.9814
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	19484450	22268551	1076	-3.4646
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	22268856	25725360	685	-3.927
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	25776875	25938472	35	-2.7982
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	25944418	26009711	21	-4.219
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	26011215	26127187	33	-2.8319
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	26127308	26861404	260	-3.9837
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	26866725	57427647	175	-3.0125
