Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	61735	1510801	225	-0.0545
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	1627918	1687650	19	-0.8113
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	1687687	12892508	6296	-0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	12909977	12927107	7	-1.127
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	12927856	13375345	10	-0.1149
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	13375401	13376042	5	-0.9393
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	13376489	15489638	1406	-0.005
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	15489657	15490190	8	-0.8137
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	15490286	17195155	835	-0.0241
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	17203497	17277940	62	0.3234
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	17282425	25583341	5247	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	25593128	25646946	27	-2.2069
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	25646986	72750353	28745	0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	72756113	72811133	55	0.3888
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	72811148	104178038	20030	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	104221531	104225568	11	-0.9795
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	104239689	108910745	2960	-0.0085
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	108928460	108970919	8	-1.2294
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	108985773	109571177	337	0.0051
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	109574526	109574647	2	-1.6403
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	109604241	110246130	324	0.0295
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	110246273	110250235	4	-1.3445
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	110250236	112690326	1941	0.0079
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	112695965	112696997	17	0.731
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	112697012	174796405	23076	0.0031
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	174796556	174797333	7	-1.0958
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	174797385	194448234	13175	-0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	194451411	194455018	2	-2.3135
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	194457016	196812507	1546	0.0153
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	196812530	196815791	2	-2.2416
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	196816730	228730668	21111	0.0054
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	228731677	228741147	3	-1.6984
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	228791784	245636410	12515	0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	245637039	245646904	11	-4.3278
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	1	245649651	249224388	2199	0.0121
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	12784	6692000	5089	-0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	6694519	6701608	6	-1.3029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	6708722	34691069	18954	0.0072
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	34699315	34737057	46	-2.4041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	34737163	97849997	37026	0.0056
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	97854159	97877001	16	-0.794
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	97877173	98118212	25	-0.1894
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	98140747	98162189	9	1.0531
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	98166878	146865094	29475	0.0056
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	146865183	146866934	17	0.9842
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	146877806	152787401	3507	0.006
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	152787697	152793864	2	-1.7755
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	152794904	159958620	4259	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	159960343	159960973	2	-2.5774
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	159963287	180418388	12683	0.0084
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	180418490	180422137	27	-0.8439
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	180425643	184794595	2756	-0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	184794672	184802315	12	-1.0496
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	184802441	185316676	392	0.0422
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	185316880	185320059	4	1.4572
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	2	185325519	243089456	35333	0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	60345	6646543	5826	0.0045
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	6651128	6652676	17	-1.0095
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	6653068	68724692	41878	0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	68725751	68747413	17	0.715
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	68748758	98936963	15917	-0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	98937784	98949301	36	-0.5615
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	98949308	129754349	18704	0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	129754605	129806236	58	-0.3309
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	129806924	133024867	2125	6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	133024882	133032714	11	0.6302
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	133032892	136019099	1889	-0.0092
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	136022951	136025426	2	-2.3998
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	136038541	140542539	2690	-0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	140545701	140546984	2	-3.416
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	140560618	162714517	13662	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	162717727	162719562	2	-3.4979
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	162726159	192877902	19065	0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	192877962	192882888	18	-1.0005
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	192882903	195455940	1514	-0.0058
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	195455956	195474182	12	0.7226
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	3	195474763	197896118	1171	-0.0106
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	12281	34779054	22794	0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	34786500	34829949	42	0.691
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	34830004	48257615	8584	-0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	48259825	48259925	2	2.5321
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	48260003	49510399	387	-0.0176
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	49511202	49658223	15	-0.6573
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	49658612	69260551	10445	-0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	69282205	69288142	5	-2.2314
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	69294799	70389716	573	0.0158
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	70389861	70390779	2	-3.5416
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	70391888	115173700	27177	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	115175323	115184322	28	0.8402
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	115184380	116165868	606	0.0061
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	116166104	116173269	11	-1.0698
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	116175254	161873925	27373	-0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	161873940	161885123	30	-0.5021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	161885165	172374884	6657	0.0049
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	172374949	172377724	9	1.8114
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	172380371	173422522	639	-0.0129
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	173424947	173428643	7	1.1905
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	173441132	190189043	11468	-0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	190195118	190195662	3	-2.5817
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	4	190199264	191027923	385	-0.0748
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	15532	21376844	15693	-0.0057
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21377839	21377853	2	-2.6726
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21386066	21449276	45	-0.0214
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21451200	21452438	5	-2.1228
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	21452496	27525514	3545	-0.0059
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	27525907	27526020	8	-2.3368
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	27527479	57321646	16511	7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	57326027	57332075	20	1.8627
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	57332275	103851221	26818	0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	103860373	103860604	4	2.4095
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	5	103861049	180790320	50206	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	149661	26732391	20245	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	26732406	26798300	33	0.3665
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	26799498	29837072	1426	-0.0179
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	29837187	29849267	16	-1.3797
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	29850196	32624591	1243	-0.014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32625095	32626618	4	-2.3779
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32650612	32686196	37	-0.0437
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32688615	32688853	3	2.0818
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	32689324	53931151	13672	0.002
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	53931230	53931855	4	-2.6492
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	53935348	57330320	2021	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	57330883	57423186	46	-0.3529
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	57434895	69686629	5282	-0.0075
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	69687698	69691368	4	-1.1546
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	69697406	77014948	4620	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77016900	77016926	3	1.1875
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77016993	77439868	297	0.0187
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77440048	77452689	19	-0.9477
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	77452757	134266268	35643	-0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	134269071	134269632	2	-2.3004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	6	134272072	171051005	25112	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	7	43355	159127004	98315	-8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	31254	593041	326	-0.0413
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	594944	595908	10	-0.9916
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	601043	6840297	7382	-0.0041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	6858815	6878188	5	-1.2534
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	6878853	6988468	70	0.0062
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	6988926	8092025	262	-0.3435
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	8093182	12198189	3227	-0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	12198254	12542733	123	-0.589
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	12548745	24972187	10386	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	24974443	24984250	26	-0.8342
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	24991104	39230659	9012	-0.005
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	39235603	39386965	56	-2.6434
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	39388299	40183797	587	-0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	40183799	40189511	33	-3.2794
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	40192910	64848636	13001	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	64848897	64849510	7	1.0186
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	64849723	72215311	4234	0.0031
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	72215364	72216599	8	-1.0689
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	72219863	123511247	31264	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	123511652	123571880	56	-0.9819
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	8	123574070	146298155	15661	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	46587	43187967	31303	-3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	43315670	43780909	38	-1.4523
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	43790346	44241817	30	-0.2367
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	44243434	44629223	21	-0.8811
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	44727859	44875942	39	0.417
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	9	44888127	141091394	48258	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	72809	12163857	10188	0.0028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	12165997	12169512	2	2.0564
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	12176997	17894976	4652	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	17927554	17949857	3	-1.3796
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	17971816	24372757	4346	0.0088
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	24375263	24378054	12	0.9491
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	24378908	47020176	12367	0.0047
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	47022411	48311058	318	0.3682
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	10	48312447	135506704	58956	0.0016
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	198510	18940870	12709	-1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	18949072	18961988	56	-1.2009
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	18962016	54965608	21563	5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	54969861	55036472	13	-0.7571
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	55039257	55363340	194	-0.0214
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	55374032	55447465	55	0.7016
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	11	55452534	134944770	52283	1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	150442	8558792	5602	0.0052
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	8558813	8581141	18	-0.5096
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	8584672	30235581	14878	0.0034
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	30239267	30243933	26	-0.6037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	30243950	39477327	3795	0.0106
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	39481561	39483113	5	-1.2369
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	39488048	45899825	4094	0.0066
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	45904438	45909537	4	-2.4448
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	45913292	77898561	19574	-0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	77898856	77898871	2	2.7827
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	12	77898884	133778189	36771	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	19026949	25035607	4041	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	25039590	25039598	3	-1.8814
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	25039678	38075965	9485	0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	38076267	38084732	11	0.9625
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	38084757	57906648	12614	0.0057
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	57906957	57907840	2	2.1368
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	57910194	98527274	25829	0.004
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	98530124	98531465	6	-1.1496
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	13	98533830	115108397	12143	0.0093
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	19002124	19557041	40	-0.0398
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	19562139	19796184	20	0.7881
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	19801755	19975977	12	0.0856
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	20010913	20423372	118	0.9464
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	20424926	47632916	17092	-0.0071
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	47634767	47634843	2	-1.9055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	47635668	74006707	16933	-0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	74006851	74020979	7	-2.4146
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	74029900	96031998	14599	0.0041
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	96032052	96032288	2	-2.0567
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	96032580	98153113	1578	-0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	98153706	98155055	8	-1.221
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	98156589	106459152	4542	0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	106459999	106542277	34	-0.405
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	14	106547314	107285437	425	0.0335
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	20016328	20440538	68	-0.0616
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	20446138	22681076	353	-0.6117
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	22681250	30502279	4681	-0.0084
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	30502295	31077482	147	-0.6423
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	31077648	32443464	983	-1.0543
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	32444055	32512220	19	-0.7278
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	32531316	32857482	46	-0.3708
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	32859858	34467672	1336	0.0037
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	34467806	34469135	2	-1.754
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	34469959	40053630	3990	-0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	40058092	40058493	2	-1.8073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	40058875	56598441	9751	-4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	56598777	56600839	2	-1.8807
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	56603180	97808409	27094	0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	97817792	97832187	11	-0.8404
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	15	97833649	102469040	3417	-0.0046
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	60777	16585264	11762	-0.0067
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	16592713	16652699	8	1.0803
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	16656975	18255924	999	-0.0042
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	18262173	18768693	38	0.3813
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	18770846	20057900	780	-0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	20058773	20058816	2	-1.6259
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	20059083	22431370	1217	-0.0132
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	22441974	22710742	75	-0.4513
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	22712979	34459601	5608	0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	34459709	34755566	168	0.4999
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	34757071	55132206	5968	-0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	55135859	55136816	2	-2.0006
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	16	55136905	90287535	25649	-0.0038
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	526	8242910	4532	-0.0091
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	8247547	8247733	2	-3.0427
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	8249458	18355392	6874	-0.0052
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	18358946	18465221	28	-1.7662
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	18469197	18965529	175	-0.0058
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	19003421	19015652	3	-1.2488
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	19030156	20395887	651	0.0056
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	20410231	20413446	2	-1.9553
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	20431180	25772929	970	-0.0121
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	25774895	25779090	3	-1.6353
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	25780893	39421685	7657	-0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	39421708	39430531	25	-1.553
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	39432724	44163098	2503	-0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	44165803	44280676	96	0.6084
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	44283376	44288530	4	1.5493
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	44288579	44364170	24	0.5971
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	44394412	71976686	16951	0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	71976954	71980079	3	-1.7984
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	71984532	77363513	3017	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	77365534	77389101	19	0.7112
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	17	77400623	81049726	1612	-0.0029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	18	11543	78015057	50673	0
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	90910	15038939	6112	-0.0079
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	15045192	15049299	3	-1.8497
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	15051287	20746190	2929	-0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	20759077	20759858	2	-2.222
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	20765130	35856043	7726	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	35856081	35861848	18	-0.6816
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	35866744	51332267	7528	9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	51332386	51333238	5	-1.1639
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	51339207	53518514	1503	-0.0153
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	53518747	53554240	23	0.513
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	53554319	55508705	1193	-0.0182
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	55509307	55509688	2	-1.8665
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	55509865	56282369	361	-0.0078
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	56282535	56286293	4	1.2578
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	56288941	58940514	1790	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	58943408	58944375	2	-1.5348
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	19	58946056	59097854	51	0.0256
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	20	61305	1560922	1202	0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	20	1560951	1599002	42	1.2755
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	20	1599061	62956153	41124	-5e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	10736871	10943554	35	-0.3989
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	10953424	46022529	23088	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	46023573	46023668	3	-2.1261
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	21	46023713	48096957	1220	0.0196
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	16052528	16152285	19	0.5238
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	16205766	17495551	355	-0.0402
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	17499034	17499508	2	1.7183
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	17499890	20330744	1766	-0.0142
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	20397856	20499111	5	1.0725
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	20662706	21465493	694	-0.0572
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	21465630	21809185	27	0.3675
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	21815866	21840765	19	1.1401
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	21841832	22382276	267	-0.0304
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	22382330	22386829	4	1.0098
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	22388086	23262981	747	-0.0358
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	23263242	23263257	2	-2.5308
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	23263274	24337949	698	-0.0107
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	24344422	24396814	20	0.7395
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	24401529	39351466	10835	-0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	39363619	39395298	32	-0.6298
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	22	39395381	51234455	7999	-0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	168477	62457637	33753	0.0017
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	62470452	62493578	14	0.7896
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	62493661	76349873	6291	-0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	76353650	76545159	19	-0.8842
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	76546512	111711367	18662	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	111717913	111742496	15	-1.0519
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	111742777	117490044	3415	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	117490297	117494452	3	-1.5211
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	117496052	150292898	19794	0.0016
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	150293934	150295459	2	-2.6863
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	X	150296555	155182354	2429	-0.0062
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	2650438	6101425	867	-2.8265
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	6107901	6327325	98	-4.2132
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	6327861	8352852	1093	-3.3435
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	8353707	9663128	500	-3.7641
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	9664073	15590276	991	-3.3011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	15590342	15594523	3	-7.5522
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	15594889	19570247	2071	-3.3755
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	19570632	21024613	668	-3.9796
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	21025062	23859163	1077	-3.4628
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	23859468	27315972	685	-3.927
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	27367487	27529084	35	-2.7982
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	27535030	27600323	21	-4.219
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	27601827	27717799	33	-2.8319
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	27717920	28452016	260	-3.9837
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_A01_1359052	Y	28457337	59018259	175	-3.0125
