Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	1	3208470	245880329	128679	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	474222	105512739	55577	0.0061
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	105512807	105518536	2	-2.7028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	105518684	242124735	75350	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	3	526235	199023074	106099	1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	4	1043934	189836143	102509	9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	967233	18881094	11454	3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	19015342	19028480	11	-1.0224
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	19063751	170186559	83492	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	170187356	170188169	2	-2.0197
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	170189959	180293075	5329	-4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	6	959281	170745844	96253	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	7	671810	158077879	81141	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	607667	58711524	30695	3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	58724117	58724140	2	-1.6586
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	58728627	85121609	15306	0.0015
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	85122026	85124892	2	1.9544
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	85128553	145304484	35332	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	9	779932	140058573	67801	-0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	10	405240	135075077	80662	0.0047
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	11	446120	133647740	77024	-0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	12	760163	131671419	73686	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	13	18348806	114005560	56476	0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	14	19571208	41278271	11692	0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	14	41281131	41282707	2	-2.8777
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	14	41288449	105059083	37592	-7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	15	21238778	99701830	44388	0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	16	593460	87907437	40753	-0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	17	933971	78510305	36859	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	18	319586	75210228	42546	9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	19	235018	63570038	23866	-6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	20	403764	5679199	3044	0.003
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	20	5680675	5685039	3	-2.2857
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	20	5691282	61690281	34129	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	21	14269492	46503202	20532	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	22	15803930	47717016	16886	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	3167107	145858585	60004	0.0087
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	145860710	145861121	2	-4.5135
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	145861832	149369432	1787	0.0173
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	149370411	149371330	2	-2.7884
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	149373456	152377202	1259	0.0308
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	152380555	152381349	2	-3.3182
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	152382266	154558783	368	0.0626
