Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	1	3218610	247813706	128734	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	484222	64635361	37108	0.0054
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	64636261	64637228	2	-1.8532
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	64637502	106146307	18459	0.0077
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	106146375	106152104	2	-2.7028
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	2	106152252	242476062	75350	0.0055
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	3	2212571	197538677	106092	1e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	4	1053934	188763651	102514	9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	914233	18845337	11456	4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	18979585	18992723	11	-1.0224
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	19027994	170253981	83489	0.0019
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	170254778	170255591	2	-2.0197
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	5	170257381	180360469	5330	-4e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	6	1014281	170903919	96262	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	7	705284	158385118	81142	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	617667	58548970	30695	3e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	58561563	58561586	2	-1.6586
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	58566073	84959054	15309	0.0016
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	84959471	84962337	2	1.9544
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	8	84965998	145232496	35336	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	9	789932	140938752	67813	-0.0036
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	10	415240	135225087	80660	0.0047
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	11	456120	134142530	77014	-0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	12	889902	133161346	73681	0.0044
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	13	19450806	114987458	56472	0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	14	20501368	42208521	11692	0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	14	42211381	42212957	2	-2.8777
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	14	42218699	105988038	37590	-7e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	15	23687685	101884307	44386	0.0021
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	16	653459	89379936	40688	-0.0025
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	17	987221	80917016	36859	0.0023
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	18	329586	77109240	42543	8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	19	284018	58878226	23866	-6e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	20	455764	5731199	3046	0.0032
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	20	5732675	5737039	3	-2.2857
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	20	5743282	62219837	34130	0.0043
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	21	15347621	47678774	20531	0.0027
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	22	17423930	49331012	16885	0.0013
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	3157107	146050893	60024	0.0087
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	146053018	146053429	2	-4.5135
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	146054140	149618774	1785	0.0173
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	149619753	149620672	2	-2.7884
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	149622798	152724008	1259	0.0309
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	152727361	152728155	2	-3.3182
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_B01_1359070	X	152729072	154905589	368	0.0626
