Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	1	3208470	236839608	123419	0.0024
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	1	236839903	236842238	3	-1.7691
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	1	236842448	245880329	5301	0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	2	474222	242124735	130941	-9e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	3	526235	67144595	37850	0.0014
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	3	67148354	67149000	2	-2.2861
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	3	67149950	123444936	28615	0.0035
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	3	123445533	123446497	2	-2.2647
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	3	123447064	199023074	39674	0.001
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	4	1043934	189836143	102522	-0.0628
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	5	967233	180293075	100304	0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	6	959281	64803224	34989	-0.0018
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	6	64803412	65150846	142	-0.7114
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	6	65155438	170745844	61152	0.0022
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	671810	45137035	25511	2e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	45137043	45144849	4	-1.7797
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	45145127	93562731	21871	0.0082
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	93563040	93567623	6	-1.1457
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	93572772	116421765	11689	0.1079
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	116422284	116422989	2	-2.9709
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	116423358	122853946	3470	0.1466
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	122854379	122862339	2	-1.4853
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	122862766	140142672	9672	0.1324
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	140144923	140144945	2	-1.4554
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	7	140145576	158077879	8934	0.1335
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	8	607667	83214780	45020	-8e-04
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	8	83216727	85117983	997	0.5566
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	8	85121609	85124892	3	-1.18
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	8	85128553	90522892	2777	-0.0072
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	8	90533696	111135570	11671	0.5445
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	8	111136170	111300899	87	0.002
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	8	111302057	145304484	20810	0.5454
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	9	779932	28540575	17461	-0.8121
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	9	28971526	140058573	50320	0.0045
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	10	405240	135075077	80683	-0.0012
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	11	446120	16593899	9863	0.0063
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	11	16594038	16594618	5	-1.5744
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	11	16602664	116165703	55184	0.0046
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	11	116167789	128391275	8786	0.328
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	11	128394265	132771541	2728	-0.4225
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	11	132774357	132797602	27	0.4094
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	11	132798229	133647740	442	-0.3765
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	12	760163	3893571	1546	0.0391
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	12	3894449	3925424	32	0.5715
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	12	3934417	131671419	72138	0.0084
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	13	18348806	114005560	56498	-0.0026
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	14	19571208	105059083	49309	0.0048
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	15	21238778	99701830	44406	0.0117
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	16	593460	62175746	24816	0.0061
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	16	62177011	62178239	2	1.8645
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	16	62179837	87907437	15945	0.007
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	17	933971	55009894	25144	0.0039
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	17	55020137	78510305	11730	0.4974
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	18	319586	55488509	32192	0.0073
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	18	55492498	55492869	2	-1.6847
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	18	55493989	69923546	6885	-0.0204
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	18	69924313	69927087	2	-1.9904
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	18	69931697	75210228	3474	-0.0227
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	19	235018	10381064	3440	0.0271
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	19	10393803	10709149	136	0.5289
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	19	10709466	46887844	13604	0.011
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	19	46893400	63570038	6671	-0.8659
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	20	403764	61690281	37194	0.0114
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	21	14269492	46503202	20539	0.0069
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	22	15803930	41803193	12637	0.0279
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	22	41803606	47717016	4242	-0.9149
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	X	3167107	71557752	27529	0.0072
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	X	71561034	71822777	103	-2.8029
WAGER_p_TCGA_282_284_285_286_N_GenomeWideSNP_6_H04_1359028	X	71823532	154558783	35896	0.0081
