Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	1	3218610	247813706	128947	0.0489
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	2	484222	82386598	47297	-0.2311
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	2	82388370	106146307	8300	0.0433
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	2	106146375	106152104	2	-1.4572
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	2	106152252	199279371	49646	0.0316
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	2	199281023	199459490	107	-0.2406
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	2	199461897	242476062	25735	0.0276
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	2212571	41127215	23263	-0.2334
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	41127360	41127606	3	-1.8498
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	41129513	45000322	2020	-0.2195
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	45004563	45006370	3	-2.2061
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	45011117	107382022	32861	-0.2372
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	107382343	107382402	2	-2.8496
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	107389904	180118670	39159	-0.263
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	180119370	180159833	22	0.3194
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	180160498	180221952	27	-0.1831
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	180225116	181847343	785	0.0879
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	181852072	187916895	3240	0.3469
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	187919958	192844661	3079	-0.2304
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	192851363	194067739	721	-0.698
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	194067766	194068054	2	-2.9725
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	3	194070213	197538677	977	-0.6839
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	1053934	170036090	93209	0.0584
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	170036382	172161394	1148	-0.2678
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	172162230	174657851	1255	0.06
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	174659094	174659339	2	-0.9085
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	174659503	181096387	3446	0.0708
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	181099373	182361906	605	-0.3054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	182362302	182660440	247	0.0571
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	182661635	182662819	4	-1.4631
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	182663155	186777507	1567	0.0445
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	4	186778219	188763651	1161	-0.3243
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	5	914233	148287096	80495	0.0472
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	5	148287163	148287177	2	-1.6566
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	5	148291418	173951029	16875	0.0397
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	5	173952640	173954569	5	-0.6833
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	5	173958388	180360469	3008	0.033
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	6	1014281	170903919	96294	-0.2525
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	7	705284	92576212	46778	0.0652
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	7	92577760	92578269	2	-1.1912
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	7	92579180	147422519	28879	0.0866
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	7	147424394	149886485	1212	0.3154
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	7	149889843	158385118	4351	0.0666
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	617667	66972201	35741	0.0439
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	66973795	66989935	9	0.5271
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	66992957	68678210	820	0.0501
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	68679248	70082788	938	0.3224
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	70089105	70399367	192	0.0234
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	70401379	70954354	385	0.2994
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	70954676	70954834	4	-0.4754
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	70961161	84566741	7742	0.3256
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	84572978	84618662	26	0.0312
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	84620608	84699848	49	0.2734
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	84705236	86841168	933	0.0349
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	86841229	86858267	31	0.283
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	86858424	86864794	14	-0.102
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	86865488	91526209	2584	0.321
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	91529217	112851872	11963	0.5415
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	112852290	114825157	1044	0.8661
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	114826475	115098776	157	0.559
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	115098900	115107480	4	1.1705
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	115109608	119559855	2690	0.5467
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	119566977	120017703	335	0.8717
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	120021037	120021049	2	-0.4303
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	120021164	120411076	284	0.8804
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	120414548	121085508	446	0.5653
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	121093395	142326445	14589	0.3213
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	142329410	144395111	293	0.0451
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	144399336	144437959	17	-0.2898
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	8	144438047	145232496	171	-0.7631
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	9	789932	12657532	6257	-0.1984
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	9	12659691	12925848	197	0.0743
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	9	12975635	20443347	5964	-0.1995
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	9	20453635	20625228	114	0.071
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	9	20625875	26257238	3583	-0.1864
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	9	26433917	140938752	51800	0.0545
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	10	415240	39063955	26092	0.3361
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	10	39064000	135225087	54656	0.0458
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	11	456120	16625711	9884	0.0391
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	11	16637323	16638042	6	-0.7464
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	11	16646088	50055330	20588	0.0413
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	11	56013798	59265359	1817	0.2804
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	11	59273670	59991024	416	0.0658
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	11	59996457	134142530	44450	0.2891
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	12	889902	24395202	13701	0.0512
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	12	24395222	24395272	2	-1.2198
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	12	24396944	40536061	6555	0.0455
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	12	40544682	133161346	53520	-0.2879
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	13	19450806	75244241	31808	0.0395
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	13	75249458	75249704	3	-1.6931
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	13	75252662	114987458	24773	0.0433
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	20501368	50735131	15386	0.0533
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	50735952	53068922	1632	-0.225
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	53069090	53365816	148	0.0409
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	53365968	53469634	59	-0.2315
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	53470465	54583187	722	0.0389
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	54585247	58297445	2496	-0.2416
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	58300829	58301003	2	-1.7174
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	58301171	60946231	1626	-0.2345
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	60948318	61033989	54	0.0269
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	61036883	61078381	20	-0.2453
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	61082547	62333535	722	0.0619
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	62341014	62725276	258	0.2695
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	62727000	63191476	324	0.0484
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	63191927	73575723	6204	-0.2384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	73579600	81874873	5213	0.0431
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	81876959	82515169	395	-0.266
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	82518330	83590711	728	0.0406
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	83590750	84366048	516	-0.2609
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	14	84372828	105988038	12853	0.0488
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	15	23687685	97565432	42088	0.0191
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	15	97566854	97567335	2	-1.3431
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	15	97574601	101884307	2400	-0.0183
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	16	653459	89379936	40736	0.0362
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	17	987221	4599657	1566	0.0479
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	17	4599881	4611876	4	-0.8848
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	17	4615098	80917016	35356	0.0458
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	18	329586	77109240	42611	0.0502
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	19	284018	24052992	8956	0.0486
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	19	28240494	58878226	14923	-0.2521
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	20	455764	62219837	37208	0.0321
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	21	15347621	41109024	16607	0.0378
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	21	41110282	41115528	2	-2.4266
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	21	41118643	47678774	3948	0.0365
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	22	17423930	49331012	16891	0.0395
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	3157107	66632637	25256	0.3028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	66746743	72835433	2508	-0.0284
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	72840095	82241627	3440	-0.3453
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	82241942	82245340	5	0.4135
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	82246463	103957821	8893	-0.3702
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	103958033	103961049	2	-2.6329
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	103961708	107872288	1685	-0.3782
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B01_1439056	X	108020484	154905589	21347	-0.1039
