Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	3208470	156781153	72018	0.0647
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	156781259	156781568	5	0.9245
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	156781582	171908073	10521	0.0727
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	171910724	171920088	4	-0.9148
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	171928723	245880329	46419	0.0853
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	474222	2335693	465	-0.5667
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2336652	2376429	32	-0.0573
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2382315	2529569	131	-0.6312
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2535846	2691950	132	-0.1474
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2692664	2793470	75	-0.5786
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2795184	2871078	64	0.0967
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2871316	3125043	194	-0.6095
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	3276500	11458836	5680	0.0732
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	11462771	11940254	319	-0.6518
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	11954630	11962908	11	0.1769
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	11962991	12007398	46	-0.6218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	12008067	12188511	178	0.086
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	12192154	13267637	734	-0.5731
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13270183	13543565	161	0.1347
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13544455	13545899	4	-0.6702
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13548812	13873091	178	0.1094
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13881491	14381272	265	-0.5527
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	14383662	22171753	5306	0.0928
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	22297345	22670692	241	-0.5969
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	22674566	22705757	27	0.1205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	22707997	22927201	139	-0.5227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	22929016	23114485	164	0.1035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	23116339	23836276	521	-0.6316
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	23838184	24043434	82	0.0331
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24043767	24205140	68	-0.6199
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24205732	24248963	22	-0.267
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24257498	24270848	12	-0.6631
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24275634	24485003	92	-0.1241
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24485626	24514866	19	-0.7088
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24572621	242124735	115847	0.0885
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	526235	20897304	11173	0.2568
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	20897577	46552402	15207	0.0167
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	46558625	48812186	890	-0.2807
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	48822922	190429427	74945	0.0679
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	190435218	192079442	1137	-0.5893
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	192079646	192595148	314	0.1182
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	192610267	193537025	507	-0.5366
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	193537844	193566308	27	-0.0477
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	193568665	195016611	810	-0.5458
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195039506	195171164	94	-0.1557
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195176275	195373094	131	-0.618
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195373706	195432572	37	-0.1401
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195435568	195473360	24	-0.5787
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195482100	195557234	37	-0.1946
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195557301	196299376	403	-0.6467
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196300774	196349149	35	-0.2272
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196354918	196533184	85	-0.5803
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196534430	196574061	17	-0.0264
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196576933	197541857	157	-0.6163
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	197542013	197599872	18	-0.2101
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	197599939	197703191	51	-0.667
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	197711036	197759875	25	-0.1985
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	197762763	199023074	184	-0.5978
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	4	1043934	75586536	40499	0.089
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	4	75588305	189836143	62064	-0.5615
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	967233	18749589	11338	-0.6077
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	18749965	20882537	931	0.508
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	20892174	117473162	50270	0.1005
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	117477316	117501276	8	-0.6101
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	117504238	124582009	4103	0.1227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124584958	124722397	116	-0.2375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124733547	124775353	29	0.3509
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124784957	124927899	77	-0.0284
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124928096	124965326	27	0.3689
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124966030	132018344	3870	-0.2334
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	132022361	132030268	10	0.3338
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	132035563	135248728	2065	-0.279
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135253420	135274270	22	0.2298
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135289231	135387672	97	-0.241
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135390748	135419951	17	0.2206
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135420023	135424568	13	-0.3278
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135424869	135440830	21	0.2193
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135443352	135851141	253	-0.2234
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135854191	137054233	849	0.2807
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	137054409	137275004	97	0.0042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	137275360	141178953	1661	-0.5723
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	141179388	141334300	85	-0.2802
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	141334404	147369133	3968	-0.5753
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	147371293	147978684	353	-0.2462
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	147984678	172447784	15954	-0.5845
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	172448249	174362517	1423	-0.2706
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	174376106	174389679	13	0.3109
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	174392570	174606343	195	-0.28
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	174607725	180293075	2507	0.2179
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	6	959281	170745844	96423	0.0923
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	7	671810	158077879	81251	0.0883
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	607667	2101199	750	-0.8287
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	2694603	138264051	77521	0.0843
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	138266619	145304484	3203	-0.6063
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	779932	14516763	7695	-0.2474
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	14522721	14624474	113	0.2102
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	14629460	14641407	23	-0.219
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	14641911	18732434	3212	0.1798
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	18732527	19121615	405	-0.2656
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	19121878	19574397	302	0.1117
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	19574796	28156400	5634	-0.2088
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	28157088	123808564	42120	0.0859
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	123810944	124411883	427	-0.3047
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	124417835	124478460	39	0.2636
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	124479598	124619886	78	-0.2316
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	124627185	137023483	6942	0.0446
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	137026682	138821487	631	-0.3399
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	138883729	140058573	309	0.046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	405240	29943308	20466	0.4578
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	29948948	39040042	5620	0.0578
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	39040051	39040052	2	-1.3387
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	39040372	135075077	54713	0.0822
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	11	446120	50007872	30428	-0.5743
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	11	50011906	133647740	46697	0.0868
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	760163	21446958	11813	0.2388
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	21450579	21459829	6	0.9662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	21469538	36946731	7738	0.1242
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	37509833	102071736	37828	-0.5642
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	102074568	105959502	2790	0.092
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	105970712	111295835	2704	-0.5988
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	111301265	131671419	10931	0.0699
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	13	18348806	114005560	56623	0.0487
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	14	19571208	23026112	1178	0.0532
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	14	23026219	23029835	4	-0.7515
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	14	23029863	105059083	48232	0.0781
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	15	21238778	99701830	44517	0.0663
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	16	593460	87907437	40826	0.0466
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	17	933971	78510305	36945	0.038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	18	319586	75210228	42635	0.079
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	19	235018	63380242	23820	0.0169
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	19	63394897	63570038	103	-0.5983
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	20	403764	61690281	37229	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	21	14269492	46503202	20571	0.0733
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	15803930	37373999	10548	0.115
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	37376993	37488291	65	-0.1746
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	37490063	41986266	2136	0.1992
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	41986646	41986823	2	-0.8432
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	41989135	42262684	186	0.2037
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	42262997	42681488	294	-0.1834
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	42681750	44837796	1495	0.1965
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	44838268	47717016	2174	-0.1947
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	X	3167107	66069541	25031	0.3625
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	X	66086319	154558783	38134	-0.2307
