Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	3218610	158514529	72076	0.0648
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	158514635	158514944	5	0.9245
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	158514958	173641450	10520	0.0727
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	173644101	173653465	4	-0.9148
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	1	173662100	247813706	46417	0.0853
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	484222	2356686	465	-0.5667
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2357645	2397422	32	-0.0573
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2403308	2550562	131	-0.6312
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2556839	2712943	132	-0.1474
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2713657	2814463	75	-0.5786
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2816177	2892071	64	0.0967
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	2892309	3146036	194	-0.6095
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	3297493	11541385	5679	0.0732
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	11545320	12022803	319	-0.6518
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	12037179	12045457	11	0.1769
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	12045540	12089947	46	-0.6218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	12090616	12271060	178	0.086
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	12275106	13350186	733	-0.5732
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13352732	13626114	161	0.1347
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13627004	13628448	4	-0.6702
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13631361	13955640	178	0.1094
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	13964040	14463821	265	-0.5527
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	14466211	22318248	5306	0.0928
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	22443840	22817187	241	-0.5969
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	22821061	22852252	27	0.1205
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	22854492	23073696	139	-0.5227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	23075511	23260980	164	0.1035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	23262834	23982772	521	-0.6316
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	23984680	24189930	82	0.0331
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24190263	24351636	68	-0.6199
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24352228	24395459	22	-0.267
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24403994	24417344	12	-0.6631
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24422130	24631499	92	-0.1241
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24632122	24661362	19	-0.7088
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	2	24719117	242476062	115841	0.0885
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	2212571	20922300	11172	0.2567
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	20922573	46577398	15207	0.0167
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	46583621	48837182	890	-0.2807
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	48847918	188946733	74940	0.0679
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	188952524	190596748	1137	-0.5893
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	190596952	191112454	314	0.1182
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	191127573	192054331	507	-0.5366
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	192055150	192083614	27	-0.0477
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	192085971	193533917	810	-0.5458
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	193556812	193688470	94	-0.1557
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	193693581	193890400	131	-0.618
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	193891012	193949878	37	-0.1401
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	193952874	193990666	24	-0.5787
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	193999406	194075939	37	-0.1946
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	194076006	194818087	403	-0.6467
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	194819485	194867860	35	-0.2272
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	194873629	195051895	85	-0.5803
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195053141	195092772	17	-0.0264
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	195095644	196057460	157	-0.6163
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196057616	196115475	18	-0.2101
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196115542	196218794	51	-0.667
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196226639	196275478	25	-0.1985
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	3	196278366	197538677	184	-0.5978
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	4	1053934	75367672	40495	0.089
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	4	75369441	186779462	60913	-0.5603
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	4	186782291	186785115	3	-2.1696
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	4	186785293	188763651	1156	-0.6116
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	914233	18713832	11340	-0.6077
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	18714208	20846780	931	0.508
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	20856417	117445263	50268	0.1006
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	117449417	117473377	8	-0.6101
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	117476339	124554110	4103	0.1227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124557059	124694498	116	-0.2375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124705648	124747454	29	0.3509
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124757058	124900000	77	-0.0284
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124900197	124937427	27	0.3689
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	124938131	131990445	3870	-0.2334
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	131994462	132002369	10	0.3338
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	132007664	135220829	2065	-0.279
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135225521	135246371	22	0.2298
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135261332	135359773	97	-0.241
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135362849	135392052	17	0.2206
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135392124	135396669	13	-0.3278
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135396970	135412931	21	0.2193
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135415453	135823242	253	-0.2234
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	135826292	137026334	848	0.281
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	137026510	137247105	97	0.0042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	137247461	141198769	1662	-0.5719
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	141199204	141354116	85	-0.2802
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	141354220	147388940	3969	-0.5752
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	147391100	147998491	353	-0.2462
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	148004485	172515178	15952	-0.5845
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	172515643	174429911	1424	-0.2703
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	174443500	174457073	13	0.3109
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	174459964	174673737	195	-0.28
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	5	174675119	180360469	2507	0.2179
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	6	1014281	170903919	96432	0.0922
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	7	705284	158385118	81252	0.0883
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	617667	2113792	751	-0.8276
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	2707196	73101660	38648	0.0841
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	73101773	73103273	2	-1.2491
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	73106916	138194869	38877	0.0846
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	8	138197437	145232496	3203	-0.6063
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	789932	14526763	7696	-0.2474
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	14532721	14634474	113	0.2102
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	14639460	14651407	23	-0.219
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	14651911	18742434	3213	0.1798
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	18742527	19131615	405	-0.2656
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	19131878	19584397	302	0.1117
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	19584796	28166400	5633	-0.2086
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	28167088	124768743	42131	0.0859
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	124771123	125372062	427	-0.3047
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	125378014	125438639	39	0.2636
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	125439777	125580065	78	-0.2316
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	125587364	137883662	6942	0.0446
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	137886861	139701666	631	-0.3399
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	9	139763908	140938752	309	0.046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	415240	29903302	20466	0.4578
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	29908942	39000036	5620	0.0578
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	39000045	39000046	2	-1.3387
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	10	39000366	135225087	54711	0.0822
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	11	456120	50051296	30425	-0.5743
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	11	50055330	134142530	46691	0.0868
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	889902	21555691	11810	0.2388
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	21559312	21568562	6	0.9662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	21578271	33521107	7737	0.1241
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	39223566	83912313	25895	-0.5603
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	83915258	83915338	2	-2.2742
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	83917443	103547606	11931	-0.5724
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	103550438	107435372	2790	0.092
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	107446582	112811452	2704	-0.5988
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	12	112816882	133161346	10930	0.0699
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	13	19450806	114987458	56619	0.0486
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	14	20501368	23956272	1178	0.0532
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	14	23956379	23959995	4	-0.7515
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	14	23960023	105988038	48230	0.0782
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	15	23687685	101884307	44515	0.0662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	16	653459	89379936	40761	0.0466
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	17	987221	80917016	36945	0.038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	18	329586	77109240	42632	0.079
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	19	284018	58688430	23820	0.0169
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	19	58703085	58878226	103	-0.5983
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	20	455764	62219837	37232	0.0231
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	21	15347621	47678774	20570	0.0732
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	17423930	39044053	10547	0.115
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	39047047	39158345	65	-0.1746
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	39160117	43931351	2324	0.1986
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	43931664	44350155	294	-0.1834
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	44350417	46459132	1495	0.1965
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	22	46459604	49331012	2174	-0.1947
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	X	3157107	66152816	25038	0.3624
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	X	66169594	76877877	3777	-0.2427
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	X	76903426	77035051	10	-0.9669
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B05_1438966	X	77042608	154905589	34357	-0.2291
