Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	1	3208470	212992355	107934	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	1	212994798	212995049	2	-1.7772
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	1	212995208	245880329	20910	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	474222	139025893	71831	0.0043
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	139028244	139034617	2	-1.5473
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	139035866	224421520	48804	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	224425717	224431570	7	-0.9436
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	224434197	242124735	10468	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	3	526235	199023074	106256	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	4	1043934	189836143	102631	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	5	967233	168416068	93630	-1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	5	168416172	168417305	3	-1.7484
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	5	168417394	180293075	6725	0.0035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	6	959281	83626362	45451	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	6	83628239	83632476	4	-1.0369
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	6	83632993	170745844	50889	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	7	671810	158077879	81192	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	607667	3470039	1453	0.0061
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	3475054	3475452	3	-1.2716
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	3475710	131978390	72159	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	131979066	131981234	3	-1.1358
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	131982880	140737659	6653	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	140737742	140740159	6	-0.7571
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	140744219	145304484	1149	0.0141
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	9	779932	25560148	15701	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	9	25560411	25596655	13	-0.8703
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	9	25596803	140058573	52169	0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	10	405240	121275543	71929	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	10	121277240	121277302	2	-1.8187
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	10	121278491	135075077	8795	0.009
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	446120	14819035	8766	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	14828930	14860212	13	0.5564
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	14866849	24123192	6510	-0.0079
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	24127316	24127403	2	-1.3322
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	24127685	113086252	47554	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	113087800	113088180	3	-2.3639
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	113088309	131406958	13085	0.0061
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	131407015	131407657	3	-1.44
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	131411299	133647740	1182	0.0049
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	12	760163	21228225	11674	-0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	12	21232363	21275676	19	0.5451
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	12	21290763	131671419	62136	-6e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	13	18348806	114005560	56583	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	14	19571208	105059083	49351	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	15	21238778	99701830	44473	0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	16	593460	87907437	40786	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	17	933971	44633628	19056	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	17	44633642	44634761	2	-1.4986
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	17	44635300	78510305	17855	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	18	319586	75210228	42607	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	235018	1071329	153	0.0319
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	1074378	1074540	2	-1.7293
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	1078720	3064903	493	0.0183
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	3074113	3074169	2	-1.2678
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	3074738	7650840	1507	-0.0085
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	7654972	7663564	3	-1.123
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	7664339	14678062	3039	-0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	14678692	14683795	3	-0.975
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	14685160	33241850	3972	-0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	33243081	33245424	6	-1.1943
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	33248037	35976646	2059	0.0145
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	35979958	35980380	2	1.1135
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	35982439	63570038	12655	0.0047
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	20	403764	30930195	17566	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	20	30937217	30937845	2	-1.7734
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	20	30938431	61690281	19617	-0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	21	14269492	46087911	20355	-0.002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	21	46088758	46088844	2	-1.3922
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	21	46091488	46503202	197	0.0034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	22	15803930	47717016	16885	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	X	3167107	154558783	63154	0.0061
