Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	1	3218610	214925732	107992	0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	1	214928175	214928426	2	-1.7772
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	1	214928585	247813706	20907	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	484222	139309423	71821	0.0043
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	139311774	139318147	2	-1.5473
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	139319396	224713276	48805	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	224717473	224723326	7	-0.9436
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	2	224725953	242476062	10469	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	3	2212571	197538677	106250	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	4	1053934	188763651	102636	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	5	914233	168483490	93630	-1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	5	168483594	168484727	3	-1.7484
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	5	168484816	180360469	6725	0.0035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	6	1014281	83569643	45454	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	6	83571520	83575757	4	-1.0369
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	6	83576274	170903919	50895	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	7	705284	158385118	81193	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	617667	3482631	1454	0.0059
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	3487646	3488044	3	-1.2716
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	3488302	131909208	72165	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	131909884	131912052	3	-1.1358
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	131913698	140668477	6653	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	140668560	140670977	6	-0.7571
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	8	140675037	145232496	1149	0.0141
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	9	789932	25570148	15702	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	9	25570411	25606655	13	-0.8703
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	9	25606803	140938752	52180	0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	10	415240	121285553	71927	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	10	121287250	121287312	2	-1.8187
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	10	121288501	135225087	8795	0.009
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	456120	14862459	8765	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	14872354	14903636	13	0.5564
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	14910273	24166616	6509	-0.0079
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	24170740	24170827	2	-1.3322
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	24171109	113581042	47546	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	113582590	113582970	3	-2.3639
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	113583099	131901748	13085	0.0061
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	131901805	131902447	3	-1.44
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	11	131906089	134142530	1182	0.0049
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	12	889902	21336958	11671	-0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	12	21341096	21384409	19	0.5451
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	12	21399496	133161346	62134	-5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	13	19450806	114987458	56579	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	14	20501368	105988038	49349	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	15	23687685	101884307	44471	0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	16	653459	89379936	40721	2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	17	987221	47278629	19056	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	17	47278643	47279762	2	-1.4986
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	17	47280301	80917016	17855	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	18	329586	77109240	42604	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	284018	1120329	153	0.0319
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	1123378	1123540	2	-1.7293
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	1127720	3113903	493	0.0183
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	3123113	3123169	2	-1.2678
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	3123738	7744840	1507	-0.0085
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	7748972	7757564	3	-1.123
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	7758339	28550010	7014	-0.0028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	28551241	28553584	6	-1.1943
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	28556197	31284806	2059	0.0145
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	31288118	31288540	2	1.1135
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	19	31290599	58878226	12655	0.0047
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	20	455764	31466534	17569	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	20	31473556	31474184	2	-1.7734
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	20	31474770	62219837	19617	-0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	21	15347621	47263483	20354	-0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	21	47264330	47264416	2	-1.3922
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	21	47267060	47678774	197	0.0034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	22	17423930	49331012	16884	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_B06_1438980	X	3157107	154905589	63171	0.0059
