Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	3208470	114715710	64170	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	114718662	114724625	2	1.9002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	114725159	206642246	39423	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	206644337	206648744	4	1.4898
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	206654517	223563005	11219	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	223563020	223565345	3	1.5137
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	223566048	245880329	14134	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	2	474222	242124735	131197	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	3	526235	199023074	106307	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	1043934	5435377	1989	-0.0054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	5435688	5456170	21	0.4661
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	5461093	31696573	17305	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	31698489	31702698	2	1.6817
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	31703780	127599787	50861	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	127602836	127608505	2	-1.5943
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	127609000	189836143	32480	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	5	967233	82097166	43898	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	5	82099604	82099796	2	-1.8983
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	5	82102901	180293075	56528	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	6	959281	170745844	96405	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	7	671810	158077879	81251	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	8	607667	22628679	12453	0.002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	8	22629213	22630140	2	-2.8204
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	8	22632507	145304484	69004	-0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	9	779932	119769582	56661	-0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	9	119770299	119771934	3	-1.7559
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	9	119771946	140058573	11270	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	405240	14277811	9959	0.0071
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	14279933	14286828	3	1.3964
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	14289423	122418840	62867	0.0042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	122419759	122459873	29	0.4856
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	122462354	135075077	7926	-0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	11	446120	55998736	30628	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	11	55998824	55998837	2	-1.5785
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	11	55998930	133647740	46554	-0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	760163	121628547	69231	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	121630745	121780332	63	-0.774
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	121784043	131671419	4587	-0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	13	18348806	114005560	56615	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	14	19571208	105059083	49390	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	15	21238778	99701830	44506	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	16	593460	78454588	34887	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	16	78454901	78455012	3	1.4924
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	16	78455047	87907437	5940	0.0035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	933971	33664392	14563	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	33664566	33672359	2	1.5434
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	33677041	34867540	544	-0.0069
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	34873344	34877057	3	1.4374
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	34879149	78510305	21835	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	18	319586	12722293	7267	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	18	12730615	12730643	2	1.7169
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	18	12731059	75210228	35370	0.0024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	19	235018	60314733	22285	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	19	60314793	60333779	9	0.9845
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	19	60333989	63570038	1624	7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	20	403764	61690281	37236	0.0039
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	21	14269492	31383326	10836	0.0048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	21	31389523	31390093	2	2.0105
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	21	31390373	46503202	9726	0.0042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	15803930	24897914	2215	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	24899386	24907720	7	0.7542
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	24908221	35119390	7124	0.0073
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	35123064	35137909	4	1.1543
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	35138931	47717016	7555	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	X	3167107	154558783	63058	3e-04
