Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	3218610	114914187	64231	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	114917139	114923102	2	1.9002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	114923636	208575623	39420	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	208577714	208582121	4	1.4898
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	208587894	225496382	11218	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	225496397	225498722	3	1.5137
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	1	225499425	247813706	14132	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	2	484222	242476062	131189	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	3	2212571	197538677	106301	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	1053934	5384476	1989	-0.0054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	5384787	5405269	21	0.4661
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	5410192	32052675	17305	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	32054591	32058800	2	1.6817
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	32059882	127380337	50865	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	127383386	127389055	2	-1.5943
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	4	127389550	188763651	32481	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	5	914233	82061410	43899	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	5	82063848	82064040	2	-1.8983
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	5	82067145	180360469	56527	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	6	1014281	170903919	96414	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	7	705284	158385118	81252	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	8	617667	22572734	12453	0.002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	8	22573268	22574195	2	-2.8204
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	8	22576562	145232496	69011	-0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	9	789932	120729761	56673	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	9	120730478	120732113	3	-1.7559
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	9	120732125	140938752	11270	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	415240	14237805	9959	0.0071
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	14239927	14246822	3	1.3964
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	14249417	122428850	62865	0.0042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	122429769	122469883	29	0.4856
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	10	122472364	135225087	7926	-0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	11	456120	56242160	30624	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	11	56242248	56242261	2	-1.5785
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	11	56242354	134142530	46548	-0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	889902	123062594	69227	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	123064792	123214379	63	-0.774
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	123218090	125101873	874	0.013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	125103172	125105711	2	-1.4159
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	12	125106100	133161346	3710	-0.0044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	13	19450806	114987458	56611	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	14	20501368	105988038	49388	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	15	23687685	101884307	44504	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	16	653459	79897087	34822	0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	16	79897400	79897511	3	1.4924
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	16	79897546	89379936	5940	0.0035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	987221	36410559	14563	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	36410733	36418542	2	1.5434
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	36424962	37614014	542	-0.0057
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	37619818	37623531	3	1.4374
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	17	37625623	80917016	21837	2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	18	329586	12732293	7269	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	18	12740615	12740643	2	1.7169
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	18	12741059	77109240	35365	0.0024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	19	284018	55622921	22285	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	19	55622981	55641967	9	0.9845
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	19	55642177	58878226	1624	7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	20	455764	62219837	37239	0.0039
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	21	15347621	32461455	10837	0.0047
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	21	32467652	32468222	2	2.0105
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	21	32468502	47678774	9724	0.0042
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	17423930	26567914	2215	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	26569386	26577720	7	0.7542
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	26578221	36789444	7123	0.0072
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	36793118	36807963	4	1.1543
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	22	36808985	49331012	7555	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C02_1438970	X	3157107	154905589	63075	4e-04
