Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	3208470	4478355	777	-0.9247
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	4478588	4479995	7	-3.1278
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	4481126	30171793	13121	-0.8589
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	30172064	30172888	2	-6.6439
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	30173285	50304831	10652	-0.8391
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	50305224	50305556	2	-2.8532
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	50305673	86704117	22679	-0.891
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	86705521	86707496	3	-4.174
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	86707624	142745296	19728	-0.8903
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	145143007	245880329	61267	0.0403
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	474222	105512739	55663	0.0377
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	105512807	105518536	2	-1.9434
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	105518684	240497956	74622	0.0284
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	240498006	240500148	2	-1.2161
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	240500196	242124735	885	0.0765
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	3	526235	44095263	24928	0.0422
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	3	44097024	44103127	3	-1.7597
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	3	44105165	199023074	81365	0.0365
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	1043934	5437886	1991	0.0646
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	5439361	5461283	22	0.5019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	5461403	109710013	57924	0.0113
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	109711881	109739714	3	-1.6662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	109749774	127599787	10225	0.0066
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	127602836	127608505	2	-2.0199
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	127609000	138202209	4867	-0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	138202317	138202656	3	-1.2087
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	138203681	189836143	27606	0.0108
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	967233	131741125	70621	0.0179
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	131741589	131742005	3	-1.0566
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	131742308	157466532	15973	0.0342
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	157471572	157472834	2	-1.164
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	157473679	180293075	13824	0.0309
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	959281	3549240	1909	0.0481
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	3550141	3550856	2	-1.0976
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	3551500	111262093	59229	0.0439
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	111262550	111265291	2	-1.0382
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	111274887	140537283	17494	0.0314
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	140546792	140547285	2	-1.9122
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	140547803	170745844	17760	0.0384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	7	671810	45786358	25933	0.2435
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	7	45796120	45798591	2	-1.4007
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	7	45828528	158077879	55314	0.2357
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	8	607667	31020432	17980	0.0288
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	8	31024654	31025644	2	-1.1001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	8	31027127	145304484	63473	0.0171
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	9	779932	140058573	67908	0.0266
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	10	405240	122418840	72813	0.0411
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	10	122419759	122459873	29	0.5261
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	10	122462354	135075077	7928	0.0362
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	11	446120	133647740	77169	0.0793
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	12	760163	121628547	69224	0.0446
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	12	121630745	121780332	63	-0.767
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	12	121784043	131671419	4584	0.0564
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	13	18348806	114005560	56609	0.0136
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	14	19571208	105059083	49368	-0.0069
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	15	21238778	98563534	43913	0.0171
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	15	98563636	98564724	2	-1.1499
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	15	98565075	99701830	579	-0.0254
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	16	593460	944695	64	0.123
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	16	945361	947269	3	-0.6146
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	16	947462	3791226	895	0.1295
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	16	3792435	3792530	2	-0.9967
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	16	3795651	87907437	39845	0.0707
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	933971	48303710	21102	0.1032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	48672860	48735257	64	0.5661
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	48739187	48740086	2	-0.9185
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	48742208	64140192	8594	0.6132
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	64140760	64142707	3	-0.379
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	64145019	78510305	7185	0.6312
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	18	319586	75210228	42627	0.02
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	235018	12986971	4525	0.1208
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	12987772	13004972	4	1.1388
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	13005248	23844832	4436	0.0976
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	32932334	34617629	1322	-0.8845
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	34619105	34619316	3	-3.4322
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	34620552	59752353	11584	-0.8109
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	59752441	59753403	2	-4.1658
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	59756351	59817203	38	-0.7188
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	59821717	59830393	4	-2.4705
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	59831249	63570038	1810	-0.8275
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	20	403764	14346719	8831	0.0678
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	20	14346829	14347373	2	-1.1768
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	20	14355727	61690281	28378	0.0853
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	21	14269492	46503202	20563	0.024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	22	15803930	20560211	815	0.0711
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	22	20565327	20566422	3	-1.3274
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	22	20578129	47717016	16072	0.0126
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	X	3167107	154558783	62939	0.0013
