Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	3218610	4578495	777	-0.9247
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	4578728	4580135	7	-3.1278
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	4581266	30399206	13119	-0.859
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	30399477	30400301	2	-6.6439
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	30400698	50532244	10652	-0.8391
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	50532637	50532969	2	-2.8532
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	50533086	86931529	22742	-0.8882
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	86932933	86934908	3	-4.174
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	86935036	120523902	19724	-0.8903
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	1	120523955	247813706	61265	0.0402
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	484222	106146307	55655	0.0376
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	106146375	106152104	2	-1.9434
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	106152252	240849283	74622	0.0284
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	240849333	240851475	2	-1.2161
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	2	240851523	242476062	885	0.0765
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	3	2212571	44120259	24927	0.0421
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	3	44122020	44128123	3	-1.7597
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	3	44130161	197538677	81360	0.0364
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	1053934	5386985	1991	0.0645
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	5388460	5410382	22	0.5019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	5410502	109490564	57925	0.0113
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	109492432	109520265	3	-1.6662
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	109530325	127380337	10228	0.0066
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	127383386	127389055	2	-2.0199
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	127389550	137982759	4865	-0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	137982867	137983206	3	-1.2087
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	4	137984231	188763651	27609	0.0108
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	914233	131713226	70621	0.0179
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	131713690	131714106	3	-1.0566
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	131714409	157533954	15970	0.0342
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	157538994	157540256	2	-1.164
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	5	157541101	180360469	13827	0.0309
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	1014281	3604241	1909	0.0481
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	3605142	3605857	2	-1.0976
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	3606501	111155400	59231	0.0438
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	111155857	111158598	2	-1.0382
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	111168194	140495590	17499	0.0315
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	140505099	140505592	2	-1.9122
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	6	140506110	170903919	17762	0.0384
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	7	705284	45819833	25933	0.2435
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	7	45829595	45832066	2	-1.4007
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	7	45862003	158385118	55315	0.2357
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	8	617667	30900890	17980	0.0288
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	8	30905112	30906102	2	-1.1001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	8	30907585	145232496	63480	0.0171
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	9	789932	140938752	67920	0.0266
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	10	415240	122428850	72811	0.0411
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	10	122429769	122469883	29	0.5261
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	10	122472364	135225087	7928	0.0362
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	11	456120	134142530	77159	0.0792
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	12	889902	123062594	69220	0.0446
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	12	123064792	123214379	63	-0.767
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	12	123218090	133161346	4583	0.0564
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	13	19450806	114987458	56605	0.0136
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	14	20501368	105988038	49366	-0.007
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	15	23687685	100746011	43912	0.0171
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	15	100746113	100747201	2	-1.1499
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	15	100747552	101884307	578	-0.0261
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	16	653459	89379936	40744	0.0719
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	987221	50948711	21101	0.1032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	51317861	51380258	64	0.5661
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	51384188	51385087	2	-0.9185
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	51387209	66628597	8595	0.6132
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	66629165	66631112	3	-0.379
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	17	66633424	80917016	7185	0.6312
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	18	329586	77109240	42624	0.02
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	284018	24052992	8965	0.1098
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	28240494	29925789	1322	-0.8845
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	29927265	29927476	3	-3.4322
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	29928712	37752312	4779	-0.8457
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	37753239	37753941	2	-4.1374
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	37754106	55060541	6803	-0.7864
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	55060629	55061591	2	-4.1658
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	55064539	55125391	38	-0.7188
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	55129905	55138581	4	-2.4705
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	19	55139437	58878226	1810	-0.8275
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	20	455764	14398719	8834	0.0679
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	20	14398829	14399373	2	-1.1768
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	20	14407727	62219837	28378	0.0853
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	21	15347621	47678774	20562	0.024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	22	17423930	22230211	815	0.0711
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	22	22235327	22236422	3	-1.3274
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	22	22248129	49331012	16071	0.0125
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C03_1438926	X	3157107	154905589	62956	0.0015
