Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	1	3208470	245880329	128979	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	2	474222	96660881	50773	0.0078
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	2	96665034	96667465	2	-1.5443
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	2	96672255	159857021	33165	0.0074
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	2	159857287	159861084	2	-1.3257
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	2	159861760	208208578	26757	0.0119
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	2	208209190	208211796	2	-1.7377
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	2	208212838	242124735	20517	0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	3	526235	199023074	106325	0.0035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	1043934	82103784	44373	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	82107911	82108398	2	-1.9011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	82110965	95687531	7716	0.012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	95689234	95699932	3	-1.2059
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	95700244	135576728	21619	0.0125
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	135577386	135577525	2	-1.4305
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	135582080	153785288	10131	0.0056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	153790630	153792743	2	-1.4618
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	4	153793771	189836143	18847	0.0123
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	5	967233	180293075	100449	0.0039
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	6	959281	170745844	96434	0.0066
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	7	671810	68096523	35382	-9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	7	68096700	68097013	2	-1.464
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	7	68097670	157414564	45667	-5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	7	157417209	157417240	2	-1.5692
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	7	157420053	158077879	215	7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	8	607667	145304484	81481	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	9	779932	140058573	67934	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	10	405240	135075077	80803	0.0039
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	11	446120	93344921	50367	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	11	93346911	93350022	2	-2.5379
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	11	93350980	133647740	26829	0.0046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	12	760163	40098205	21117	0.0037
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	12	40102146	40102162	2	-1.38
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	12	40102412	69611286	16892	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	12	69612280	69625567	2	-1.3909
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	12	69626352	112346704	25710	0.0028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	12	112347313	112352673	3	-1.0172
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	12	112353094	131671419	10173	-0.0086
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	13	18348806	114005560	56622	0.0079
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	14	19571208	105059083	49410	-1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	15	21238778	99701830	44514	0.0028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	16	593460	87907437	40831	-0.0108
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	17	933971	60335041	27608	-0.0123
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	17	60356179	60356500	2	1.3154
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	17	60357151	71242736	6398	-0.0049
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	17	71262454	71262693	2	-1.3407
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	17	71268982	78510305	2938	-0.0046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	18	319586	70071946	39300	0.0073
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	18	70075653	70075799	3	1.2936
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	18	70079609	75210228	3340	0.0114
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	19	235018	63570038	23921	-0.0244
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	20	403764	61690281	37228	-0.0083
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	21	14269492	46503202	20574	0.0054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	22	15803930	47144714	16484	-0.009
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	22	47144811	47145575	4	-0.9427
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	22	47146860	47717016	418	-0.0053
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	X	3167107	140138152	56632	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	X	140138272	140139512	2	-3.7051
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	X	140139816	152498662	6083	0.0142
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	X	152499457	152501653	3	-1.4331
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C04_1439060	X	152502330	154558783	323	0.0533
