Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	1	3208470	245880329	128965	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	2	474222	191871265	102124	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	2	191871941	191872490	2	-1.8906
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	2	191873246	242124735	29071	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	3	526235	199023074	106321	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	4	1043934	67889673	37174	0.0025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	4	67889758	67889776	2	-2.9633
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	4	67891599	91830846	13028	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	4	91831331	91832547	2	-1.1311
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	4	91833384	141959203	27290	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	4	141960150	141961237	3	-1.0107
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	4	141968125	189836143	25183	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	5	967233	10549811	6971	0.0061
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	5	10550980	10552717	3	-0.859
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	5	10554909	16881233	3460	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	5	16884106	16884299	2	-1.3531
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	5	16887568	180293075	90007	0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	6	959281	170745844	96413	0.0036
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	7	671810	158077879	81257	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	8	607667	13499009	5787	-0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	8	13499204	13499218	2	-1.5461
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	8	13499552	145304484	75683	-0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	9	779932	140058573	67935	-0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	10	405240	135075077	80791	0.0074
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	11	446120	13684587	8108	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	11	13686135	13688218	3	-0.9971
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	11	13695996	94663094	43137	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	11	94665545	94672070	8	-0.9458
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	11	94674710	133647740	25937	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	12	760163	56780096	29798	0.0033
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	12	56783755	56788263	5	-1.0422
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	12	56800379	131671419	44090	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	13	18348806	67332051	27610	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	13	67332175	67333257	2	-1.4784
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	13	67333680	96306889	17569	-0.0035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	13	96308385	96308399	2	-1.1612
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	13	96308630	108773829	8674	-7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	13	108777185	108777456	2	-1.2825
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	13	108777471	114005560	2756	-0.002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	14	19571208	47408713	14144	0.0036
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	14	47408776	47409268	3	-1.0227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	14	47409375	105059083	35261	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	15	21238778	52145747	16171	0
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	15	52148805	52148830	2	-1.3748
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	15	52148996	99701830	28333	0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	16	593460	2271469	411	-0.0044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	16	2276395	2280604	2	-1.8867
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	16	2285389	82351496	37774	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	16	82351498	82351507	2	-1.8244
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	16	82351525	87907437	2636	-0.006
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	17	933971	21045219	9558	-0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	17	21049743	21051024	3	-0.9283
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	17	21053497	78510305	27388	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	18	319586	75210228	42635	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	19	235018	3074738	652	-0.006
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	19	3083908	3085699	2	-1.1225
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	19	3094283	35976646	10592	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	19	35979958	35980380	2	1.1726
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	19	35982439	63570038	12673	0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	20	403764	61690281	37231	0.0034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	21	14269492	24507255	6191	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	21	24510120	24510210	3	-0.9014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	21	24510827	31340960	4608	-2e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	21	31343629	31349103	9	0.4683
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	21	31351530	46503202	9755	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	22	15803930	47717016	16903	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_C12_1438954	X	3167107	154558783	62956	0.0022
