Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	1	3208470	67328766	36296	0.0073
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	1	67336670	67336869	2	-1.9604
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	1	67337074	245880329	92634	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	2	474222	33985255	20222	0.0086
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	2	33986186	34028405	45	-0.9799
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	2	34032179	242124735	110898	0.0054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	3	526235	199023074	106286	-8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	1043934	11487305	6106	0.0143
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	11488697	11837809	180	-1.0216
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	11839361	109710013	53653	0.0045
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	109711881	109739714	3	-1.4104
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	109749774	157963781	26508	7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	157968392	157971696	6	-1.054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	157972353	189836143	16192	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	967233	9267211	6002	0.0113
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	9267358	9267369	2	-1.5218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	9267415	164266703	84812	6e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	164273821	164369361	60	-1.068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	164373602	180293075	9551	0.0101
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	6	959281	170745844	96402	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	7	671810	158077879	81244	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	8	607667	145304484	81469	-0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	9	779932	30408801	18259	-0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	9	30588661	30626365	19	-0.7539
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	9	30698691	140058573	49642	0.003
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	10	405240	109448588	64104	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	10	109449036	109449635	2	-1.6823
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	10	109449704	135075077	16671	0.0072
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	11	446120	133647740	77181	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	12	760163	131671419	73865	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	13	18348806	114005560	56610	0.0068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	19571208	42546951	12363	-0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	42549941	42555068	7	-1.053
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	42556718	94133917	30685	-1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	94133946	94136305	3	-1.3553
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	94141091	105059083	6338	0.0153
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	15	21238778	43120401	10446	-0.0056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	15	43123080	43129010	3	-1.7646
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	15	43175191	99701830	34049	-0.0044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	16	593460	87907437	40820	0.0053
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	17	933971	78510305	36947	0.0044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	18	319586	75210228	42629	0.002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	235018	2501852	457	0.0375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2502470	2502484	2	-1.4521
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2503049	2848881	117	-0.0578
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2853146	2853419	2	-1.7558
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2855273	63570038	23338	0.0104
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	20	403764	61690281	37215	0.0033
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	21	14269492	46503202	20566	0.0062
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	22	15803930	16778457	583	0.0056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	22	16778976	16783629	2	-2.3638
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	22	16784655	47717016	16312	0.0121
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	3167107	107026639	41431	0.0043
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	107035269	107064153	12	-0.6056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	107065344	108125220	482	0.0248
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	108125579	108125785	2	1.3553
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	108126253	113272965	2796	0.0039
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	113276563	113276627	2	-1.8744
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	113277086	154558783	18447	0.0099
