Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	1	3218610	67556178	36293	0.0073
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	1	67564082	67564281	2	-1.9604
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	1	67564486	247813706	92692	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	2	484222	34131751	20220	0.0086
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	2	34132682	34174901	45	-0.9799
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	2	34178675	242476062	110892	0.0053
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	3	2212571	197538677	106280	-7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	1053934	11878207	6107	0.0143
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	11879599	12228711	180	-1.0216
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	12230263	109490564	53653	0.0045
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	109492432	109520265	3	-1.4104
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	109530325	157744331	26512	7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	157748942	157752246	6	-1.054
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	4	157752903	188763651	16192	0.0026
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	914233	9214211	6004	0.0111
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	9214358	9214369	2	-1.5218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	9214415	164334125	84809	6e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	164341243	164436783	60	-1.068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	5	164441024	180360469	9552	0.0101
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	6	1014281	170903919	96411	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	7	705284	158385118	81244	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	8	617667	145232496	81476	-0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	9	789932	30418801	18260	-0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	9	30598661	30636365	19	-0.7539
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	9	30708691	140938752	49653	0.003
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	10	415240	109458598	64102	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	10	109459046	109459645	2	-1.6823
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	10	109459714	135225087	16671	0.0072
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	11	456120	134142530	77171	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	12	889902	133161346	73861	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	13	19450806	114987458	56606	0.0069
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	20501368	43477201	12363	-0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	43480191	43485318	7	-1.053
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	43486968	95064164	30683	0
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	95064193	95066552	3	-1.3553
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	14	95071338	105988038	6338	0.0153
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	15	23687685	45333109	10447	-0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	15	45335788	45341718	3	-1.7646
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	15	45387899	101884307	34046	-0.0043
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	16	653459	89379936	40755	0.0052
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	17	987221	80917016	36947	0.0044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	18	329586	77109240	42626	0.002
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	284018	2550852	457	0.0375
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2551470	2551484	2	-1.4521
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2552049	2897881	117	-0.0578
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2902146	2902419	2	-1.7558
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	19	2904273	58878226	23338	0.0104
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	20	455764	6223516	3420	0.0139
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	20	6224405	6232334	4	-0.9326
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	20	6236598	62219837	33794	0.0024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	21	15347621	47678774	20565	0.0062
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	22	17423930	18398457	583	0.0056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	22	18398976	18403629	2	-2.3638
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	22	18404655	49331012	16311	0.0122
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	3157107	107139983	41446	0.0041
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	107148613	107177497	12	-0.6056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	107178688	108238564	482	0.0248
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	108238923	108239129	2	1.3553
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	108239597	113386713	2798	0.0035
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	113390310	113390374	2	-1.8744
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D02_1439066	X	113390833	154905589	18447	0.0098
