Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	1	3218610	247813706	129062	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	2	484222	39456645	22903	0.0036
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	2	39459220	39459400	2	-1.3475
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	2	39459570	242476062	108333	0.0033
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	3	2212571	197538677	106326	-0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	4	1053934	188763651	102703	-0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	5	914233	180360469	100463	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	6	1014281	140706534	78756	-0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	6	140709893	140743069	20	-0.9227
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	6	140743709	170903919	17671	0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	7	705284	158385118	81279	-4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	8	617667	104274762	56983	0.0024
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	8	104280169	104293665	15	-0.9704
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	8	104296098	121005743	9362	0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	8	121009824	121020166	16	0.5083
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	8	121024154	145232496	15121	-0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	9	789932	140938752	67961	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	10	415240	135225087	80812	0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	11	456120	134142530	77194	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	12	889902	133161346	73907	-0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	13	19450806	114987458	56627	-9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	14	20501368	105988038	49413	0.0033
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	15	23687685	63266204	22306	0.0046
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	15	63267936	63269100	2	-1.4138
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	15	63270702	101884307	22209	0.0028
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	16	653459	89379936	40772	0.0045
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	17	987221	80917016	36958	0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	18	329586	77109240	42649	0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	19	284018	58878226	23927	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	20	455764	18267003	11651	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	20	18267701	18267985	3	-1.0218
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	20	18268029	62219837	25592	0.0048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	21	15347621	47678774	20571	0.0033
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	22	17423930	49331012	16909	0.0049
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	X	3157107	26013034	9672	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	X	26013834	26014578	2	-2.6445
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	X	26014994	40442134	6968	-0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	X	40442818	40446697	3	1.5447
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D04_1438956	X	40446926	154905589	46480	0.0036
