Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	1	3208470	245880329	128966	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	2	474222	117668401	61224	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	2	117671772	117723023	31	0.4865
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	2	117725257	242124735	69943	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	526235	61101861	33497	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	61102245	61102344	2	-1.479
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	61103057	68698884	5431	0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	68701371	68707053	5	0.8691
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	68730612	69007942	198	0.0125
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	69008232	69008468	4	-0.9068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	69011660	99880198	14138	-8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	99889994	99890076	3	-0.9162
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	99890090	104257129	2238	-0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	104259903	104316735	35	0.4767
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	104325216	199023074	50765	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	1043934	104686021	57155	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	104686490	104688227	6	-0.8372
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	104690858	165685034	33748	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	165688857	165703596	9	-0.9605
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	165709594	189836143	11767	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	5	967233	180293075	100443	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	959281	8486018	5526	8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	8487229	8487242	2	-1.3034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	8490431	150962090	79343	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	150967308	150972182	9	-1.0138
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	150976656	169828967	11266	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	169829215	169833864	5	-1.061
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	169837265	170745844	258	-0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	7	671810	147563073	76063	-0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	7	147565572	147565710	2	-1.2596
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	7	147567496	158077879	5202	-0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	8	607667	3470039	1453	0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	8	3475054	3475452	3	-1.1173
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	8	3475710	145304484	80016	0
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	9	779932	140058573	67929	0.0025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	10	405240	135075077	80797	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	11	446120	98412596	53684	6e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	11	98412813	98413115	2	-1.432
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	11	98417803	133647740	23501	0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	12	760163	131671419	73891	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	13	18348806	98301643	46596	-0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	13	98303633	98307156	3	-1.0813
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	13	98307344	114005560	10025	-0.0045
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	14	19571208	105059083	49405	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	15	21238778	88393433	37611	0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	15	88394107	88394951	2	-1.6854
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	15	88396007	99701830	6899	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	593460	63771152	25978	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	63771574	63776655	9	-1.0565
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	63778888	72309047	4372	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	72309223	72309231	2	-1.2935
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	72309387	75588826	1911	0.0113
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	75588879	75588957	2	-1.3777
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	75589006	87907437	8559	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	933971	2159316	450	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	2159365	2159641	2	-1.2827
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	2159971	61477838	27862	0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	61479012	61479249	4	-0.9461
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	61483694	78510305	8630	0.0059
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	319586	21425185	10808	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	21425411	21431704	3	-1.7605
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	21433575	43842332	13758	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	43842761	43845323	3	-1.4074
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	43845869	65171722	13166	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	65172450	65172643	3	1.0077
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	65172692	75210228	4895	0.0069
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	19	235018	16443020	6260	0.0056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	19	16444060	16452422	5	-0.6858
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	19	16452464	63570038	17656	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	403764	23901831	15710	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	23902791	23904894	3	-1.0316
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	23915473	30654676	1719	-0.0034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	30663242	30663377	2	-1.1547
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	30669432	49718886	11700	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	49721332	49723548	5	-1.1062
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	49724688	61690281	8090	0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	21	14269492	36960564	14462	0.0071
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	21	36964282	36964466	3	-0.8562
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	21	36968913	46503202	6103	0.0072
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	22	15803930	47717016	16908	0.0065
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	X	3167107	49259091	20370	-9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	X	49259356	49260514	3	-2.2483
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	X	49260567	154558783	42629	0.0033
