Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	1	3218610	247813706	129021	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	2	484222	117951931	61215	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	2	117955302	118006553	31	0.4865
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	2	118008787	242476062	69944	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	2212571	61126821	33496	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	61127205	61127304	2	-1.479
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	61128017	68616194	5431	0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	68618681	68624363	5	0.8691
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	68647922	68925252	198	0.0125
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	68925542	68925778	4	-0.9068
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	68928970	98397508	14133	-8e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	98407304	98407386	3	-0.9162
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	98407400	102774439	2237	-0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	102777213	102834045	35	0.4767
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	3	102842526	197538677	50766	0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	1053934	104466572	57156	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	104467041	104468778	6	-0.8372
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	104471409	165465584	33753	0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	165469407	165484146	9	-0.9605
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	4	165490144	188763651	11766	-0.0014
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	5	914233	180360469	100443	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	1014281	8541019	5527	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	8542230	8542243	2	-1.3034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	8545432	150920397	79351	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	150925615	150930489	9	-1.0138
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	150934963	170087042	11266	0.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	170087290	170091939	5	-1.061
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	6	170095340	170903919	258	-0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	7	705284	147932140	76064	-0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	7	147934639	147934777	2	-1.2596
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	7	147936563	158385118	5202	-0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	8	617667	3482631	1454	0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	8	3487646	3488044	3	-1.1173
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	8	3488302	145232496	80022	0
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	9	789932	140938752	67941	0.0025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	10	415240	135225087	80795	0.0038
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	11	456120	98907386	53678	6e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	11	98907603	98907905	2	-1.432
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	11	98912593	134142530	23497	0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	12	889902	133161346	73886	0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	13	19450806	99503642	46592	-0.0015
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	13	99505632	99509155	3	-1.0813
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	13	99509343	114987458	10025	-0.0045
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	14	20501368	105988038	49403	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	15	23687685	90592429	37610	0.0017
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	15	90593103	90593947	2	-1.6854
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	15	90595003	101884307	6898	0.0031
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	653459	65213651	25978	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	65214073	65219154	9	-1.0565
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	65221387	73751546	4307	0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	73751722	73751730	2	-1.2935
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	73751886	77031325	1911	0.0113
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	77031378	77031456	2	-1.3777
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	16	77031505	89379936	8559	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	987221	2212566	450	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	2212615	2212891	2	-1.2827
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	2213221	64047376	27862	0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	64048550	64048787	4	-0.9461
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	17	64053232	80917016	8630	0.0059
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	329586	23171187	10808	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	23171413	23177706	3	-1.7605
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	23179577	45588334	13758	0.0018
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	45588763	45591325	3	-1.4074
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	45591871	67020742	13163	0.0016
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	67021470	67021663	3	1.0077
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	18	67021712	77109240	4895	0.0069
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	19	284018	16582020	6260	0.0056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	19	16583060	16591422	5	-0.6858
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	19	16591464	58878226	17656	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	455764	23953831	15713	4e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	23954791	23956894	3	-1.0316
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	23967473	31191015	1719	-0.0034
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	31199581	31199716	2	-1.1547
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	31205771	50285479	11700	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	50287925	50290141	5	-1.1062
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	20	50291281	62219837	8090	0.0055
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	21	15347621	38038694	14463	0.0071
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	21	38042412	38042596	3	-0.8562
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	21	38047043	47678774	6101	0.0072
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	22	17423930	49331012	16907	0.0065
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	X	3157107	49372144	20371	-9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	X	49372409	49373567	3	-2.2483
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D06_1438946	X	49373620	154905589	42645	0.0034
