Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	1	3218610	221240797	112375	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	1	221241520	221241720	2	-2.7441
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	1	221243929	247813706	16685	-0.0023
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	2	484222	206112444	109229	0.0048
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	2	206115788	206116021	3	-0.9667
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	2	206116090	242476062	22005	0.0044
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	3	2212571	11452504	5391	-0.0025
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	3	11462624	11525995	35	0.4106
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	3	11549596	197538677	100902	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	4	1053934	188763651	102708	9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	5	914233	31276399	17977	0.0029
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	5	31278764	31278943	2	-1.2969
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	5	31279298	172715409	78427	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	5	172719211	172724274	7	-0.794
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	5	172725336	180360469	4050	0.0063
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	6	1014281	167234596	95438	6e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	6	167234990	167235233	2	1.2875
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	6	167237848	170903919	1013	-0.0058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	7	705284	1743332	220	0.0163
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	7	1746307	1761381	11	-1.0011
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	7	1768000	155455416	79485	7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	7	155459799	155460299	3	-1.0965
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	7	155461521	158385118	1567	-7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	8	617667	145232496	81496	3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	9	789932	140938752	67974	-0.0012
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	10	415240	135225087	80814	0.001
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	11	456120	134142530	77203	0.0013
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	12	889902	30554772	17781	-3e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	12	30555068	30555125	2	-1.4347
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	12	30555787	133161346	56127	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	13	19450806	114987458	56632	0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	14	20501368	105988038	49417	1e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	15	23687685	56542632	17549	-0.0022
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	15	56543422	56549731	6	-0.7709
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	15	56553590	101884307	26967	5e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	16	653459	86770924	39782	-0.0019
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	16	86771069	86771845	3	0.9521
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	16	86774324	89379936	991	7e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	17	987221	9472262	4243	-0.0058
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	17	9473609	9474296	2	-1.295
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	17	9476279	80917016	32713	-9e-04
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	18	329586	73512093	40384	0
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	18	73514932	73515359	4	-0.8639
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	18	73517629	77109240	2262	0.009
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	19	284018	48531312	19739	-0.0036
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	19	48531330	48531332	2	-1.7204
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	19	48531376	58878226	4188	-0.006
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	20	455764	59518884	35958	-0.0027
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	20	59518986	59522262	2	-1.3128
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	20	59523672	62219837	1290	0.0056
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	21	15347621	47678774	20572	0.0032
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	22	17423930	35920069	9043	0.0021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	22	35920134	35923105	2	-1.1021
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	22	35923192	49331012	7866	0.0052
NICHE_p_TCGAb3_67_68_69_70_NSP_GenomeWideSNP_6_D10_1439024	X	3157107	154905589	63243	0.006
