Source Name	Provider	Material Type	Term Source REF	Characteristics[Organism]	Term Source REF	Characteristics[Sex]	Term Source REF	Characteristics[DiseaseState]	Term Source REF	Comment[OCG Cohort]	Sample Name	Material Type	Term Source REF	Characteristics[OrganismPart]	Term Source REF	Description	Protocol REF	Performer	Extract Name	Material Type	Term Source REF	Comment[SRA_SAMPLE]	Protocol REF	Performer	Extract Name	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_NAME]	Comment[SRA_EXPERIMENT]	Description	Protocol REF	Performer	Date	Assay Name	Technology Type	Term Source REF	Comment[SPOT_LENGTH]	Protocol REF	Parameter Value[Software Versions]	Protocol REF	Derived Array Data File	Comment[SRA_RUN]	Comment[SRA_FILE_URI]	Comment[OCG Data Level]	Comment[ASSEMBLY_NAME]	Protocol REF	Derived Array Data File	Comment[OCG Data Level]	Comment[miRBase Version]
TARGET-52-PABKLN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PABKLN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PABKLN-01A-01R	RNA	EFO	SRS591651	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PABKLN-01A-01R m08596 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08596	SRX528138	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PABKLN-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PABKLN-01A-01R m08596 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_TGACAT.bam	SRR1263939	@dbgap@:reads/SRP012005/SRS591651/SRX528138/SRR1263939/SRR1263939.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PABKLN-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PABKLN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PABKLN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PABKLN-01A-01R	RNA	EFO	SRS591651	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PABKLN-01A-01R m08596 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08596	SRX528138	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PABKLN-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PABKLN-01A-01R m08596 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_TGACAT.bam	SRR1263939	@dbgap@:reads/SRP012005/SRS591651/SRX528138/SRR1263939/SRR1263939.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PABKLN-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PADWRZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PADWRZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PADWRZ-01A-01R	RNA	EFO	SRS945055	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PADWRZ-01A-01R m15325 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15325	SRX1037836	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PADWRZ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PADWRZ-01A-01R m15325 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_TCGCTT.bam	SRR2039440	@dbgap@:reads/SRP012005/SRS945055/SRX1037836/SRR2039440/SRR2039440.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PADWRZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PADWRZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PADWRZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PADWRZ-01A-01R	RNA	EFO	SRS945055	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PADWRZ-01A-01R m15325 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15325	SRX1037836	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PADWRZ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PADWRZ-01A-01R m15325 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_TCGCTT.bam	SRR2039440	@dbgap@:reads/SRP012005/SRS945055/SRX1037836/SRR2039440/SRR2039440.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PADWRZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PADYCE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PADYCE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PADYCE-01A-01R	RNA	EFO	SRS945056	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PADYCE-01A-01R m15330 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15330	SRX1037835	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PADYCE-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PADYCE-01A-01R m15330 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CTGGGT.bam	SRR2039461	@dbgap@:reads/SRP012005/SRS945056/SRX1037835/SRR2039461/SRR2039461.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PADYCE-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PADYCE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PADYCE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PADYCE-01A-01R	RNA	EFO	SRS945056	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PADYCE-01A-01R m15330 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15330	SRX1037835	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PADYCE-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PADYCE-01A-01R m15330 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CTGGGT.bam	SRR2039461	@dbgap@:reads/SRP012005/SRS945056/SRX1037835/SRR2039461/SRR2039461.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PADYCE-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PADYZI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PADYZI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PADYZI-01A-01R	RNA	EFO	SRS591653	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PADYZI-01A-01R m08605 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08605	SRX528136	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PADYZI-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PADYZI-01A-01R m08605 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_AAGTGC.bam	SRR1263940	@dbgap@:reads/SRP012005/SRS591653/SRX528136/SRR1263940/SRR1263940.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PADYZI-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PADYZI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PADYZI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PADYZI-01A-01R	RNA	EFO	SRS591653	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PADYZI-01A-01R m08605 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08605	SRX528136	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PADYZI-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PADYZI-01A-01R m08605 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_AAGTGC.bam	SRR1263940	@dbgap@:reads/SRP012005/SRS591653/SRX528136/SRR1263940/SRR1263940.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PADYZI-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAEHIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAEHIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAEHIP-01A-01R	RNA	EFO	SRS945049	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAEHIP-01A-01R m15331 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15331	SRX1037842	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAEHIP-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAEHIP-01A-01R m15331 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GCCGGT.bam	SRR2039453	@dbgap@:reads/SRP012005/SRS945049/SRX1037842/SRR2039453/SRR2039453.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAEHIP-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAEHIP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAEHIP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAEHIP-01A-01R	RNA	EFO	SRS945049	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAEHIP-01A-01R m15331 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15331	SRX1037842	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAEHIP-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAEHIP-01A-01R m15331 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GCCGGT.bam	SRR2039453	@dbgap@:reads/SRP012005/SRS945049/SRX1037842/SRR2039453/SRR2039453.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAEHIP-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJLRA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAJLRA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJLRA-01A-01R	RNA	EFO	SRS945038	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJLRA-01A-01R m15312 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15312	SRX1037853	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJLRA-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAJLRA-01A-01R m15312 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GATCTG.bam	SRR2039448	@dbgap@:reads/SRP012005/SRS945038/SRX1037853/SRR2039448/SRR2039448.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJLRA-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJLRA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAJLRA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJLRA-01A-01R	RNA	EFO	SRS945038	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJLRA-01A-01R m15312 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15312	SRX1037853	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJLRA-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAJLRA-01A-01R m15312 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GATCTG.bam	SRR2039448	@dbgap@:reads/SRP012005/SRS945038/SRX1037853/SRR2039448/SRR2039448.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJLRA-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJLWM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJLWM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJLWM-01A-01R	RNA	EFO	SRS591652	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJLWM-01A-01R m08597 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08597	SRX528137	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJLWM-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJLWM-01A-01R m08597 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCCTAA.bam	SRR1263941	@dbgap@:reads/SRP012005/SRS591652/SRX528137/SRR1263941/SRR1263941.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJLWM-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJLWM	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJLWM-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJLWM-01A-01R	RNA	EFO	SRS591652	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJLWM-01A-01R m08597 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08597	SRX528137	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJLWM-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJLWM-01A-01R m08597 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCCTAA.bam	SRR1263941	@dbgap@:reads/SRP012005/SRS591652/SRX528137/SRR1263941/SRR1263941.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJLWM-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJMBW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAJMBW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJMBW-01A-01R	RNA	EFO	SRS945044	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJMBW-01A-01R m15326 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15326	SRX1037847	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJMBW-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAJMBW-01A-01R m15326 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GTCCTT.bam	SRR2039454	@dbgap@:reads/SRP012005/SRS945044/SRX1037847/SRR2039454/SRR2039454.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJMBW-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJMBW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAJMBW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJMBW-01A-01R	RNA	EFO	SRS945044	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJMBW-01A-01R m15326 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15326	SRX1037847	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJMBW-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAJMBW-01A-01R m15326 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GTCCTT.bam	SRR2039454	@dbgap@:reads/SRP012005/SRS945044/SRX1037847/SRR2039454/SRR2039454.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJMBW-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJMRB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJMRB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJMRB-01A-01R	RNA	EFO	SRS553676	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJMRB-01A-01R m08598 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08598	SRX465621	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJMRB-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJMRB-01A-01R m08598 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GTAGCC.bam	SRR1162321	@dbgap@:reads/SRP012005/SRS553676/SRX465621/SRR1162321/SRR1162321.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJMRB-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJMRB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJMRB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJMRB-01A-01R	RNA	EFO	SRS553676	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJMRB-01A-01R m08598 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08598	SRX465621	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJMRB-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJMRB-01A-01R m08598 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GTAGCC.bam	SRR1162321	@dbgap@:reads/SRP012005/SRS553676/SRX465621/SRR1162321/SRR1162321.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJMRB-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJNER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJNER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJNER-01A-01R	RNA	EFO	SRS553667	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJNER-01A-01R m08599 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08599	SRX465610	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJNER-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJNER-01A-01R m08599 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_AGTCTT.bam	SRR1162345	@dbgap@:reads/SRP012005/SRS553667/SRX465610/SRR1162345/SRR1162345.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJNER-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJNER	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJNER-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJNER-01A-01R	RNA	EFO	SRS553667	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJNER-01A-01R m08599 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08599	SRX465610	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJNER-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJNER-01A-01R m08599 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_AGTCTT.bam	SRR1162345	@dbgap@:reads/SRP012005/SRS553667/SRX465610/SRR1162345/SRR1162345.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJNER-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJNFP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJNFP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJNFP-01A-01R	RNA	EFO	SRS553678	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJNFP-01A-01R m08600 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08600	SRX465624	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJNFP-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJNFP-01A-01R m08600 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_TATCGT.bam	SRR1162341	@dbgap@:reads/SRP012005/SRS553678/SRX465624/SRR1162341/SRR1162341.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJNFP-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJNFP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJNFP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJNFP-01A-01R	RNA	EFO	SRS553678	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJNFP-01A-01R m08600 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08600	SRX465624	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJNFP-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJNFP-01A-01R m08600 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_TATCGT.bam	SRR1162341	@dbgap@:reads/SRP012005/SRS553678/SRX465624/SRR1162341/SRR1162341.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJNFP-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJNFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJNFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJNFZ-01A-01R	RNA	EFO	SRS553672	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJNFZ-01A-01R m08601 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08601	SRX465615	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJNFZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJNFZ-01A-01R m08601 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_AATTAT.bam	SRR1162340	@dbgap@:reads/SRP012005/SRS553672/SRX465615/SRR1162340/SRR1162340.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJNFZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJNFZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAJNFZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJNFZ-01A-01R	RNA	EFO	SRS553672	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJNFZ-01A-01R m08601 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08601	SRX465615	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJNFZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAJNFZ-01A-01R m08601 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_AATTAT.bam	SRR1162340	@dbgap@:reads/SRP012005/SRS553672/SRX465615/SRR1162340/SRR1162340.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJNFZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAJPHJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAJPHJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJPHJ-01A-01R	RNA	EFO	SRS945054	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJPHJ-01A-01R m15311 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15311	SRX1037837	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJPHJ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAJPHJ-01A-01R m15311 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_ATTGGC.bam	SRR2039460	@dbgap@:reads/SRP012005/SRS945054/SRX1037837/SRR2039460/SRR2039460.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJPHJ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAJPHJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAJPHJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAJPHJ-01A-01R	RNA	EFO	SRS945054	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAJPHJ-01A-01R m15311 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15311	SRX1037837	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAJPHJ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAJPHJ-01A-01R m15311 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_ATTGGC.bam	SRR2039460	@dbgap@:reads/SRP012005/SRS945054/SRX1037837/SRR2039460/SRR2039460.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAJPHJ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAKHTL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAKHTL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKHTL-01A-01R	RNA	EFO	SRS553665	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKHTL-01A-01R m08602 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08602	SRX465608	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKHTL-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAKHTL-01A-01R m08602 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_CCGGTG.bam	SRR1162355	@dbgap@:reads/SRP012005/SRS553665/SRX465608/SRR1162355/SRR1162355.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKHTL-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAKHTL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAKHTL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKHTL-01A-01R	RNA	EFO	SRS553665	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKHTL-01A-01R m08602 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08602	SRX465608	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKHTL-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAKHTL-01A-01R m08602 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_CCGGTG.bam	SRR1162355	@dbgap@:reads/SRP012005/SRS553665/SRX465608/SRR1162355/SRR1162355.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKHTL-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAKLYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAKLYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKLYZ-01A-01R	RNA	EFO	SRS945037	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKLYZ-01A-01R m15327 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15327	SRX1037854	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKLYZ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAKLYZ-01A-01R m15327 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CCTATT.bam	SRR2039441	@dbgap@:reads/SRP012005/SRS945037/SRX1037854/SRR2039441/SRR2039441.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKLYZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAKLYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAKLYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKLYZ-01A-01R	RNA	EFO	SRS945037	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKLYZ-01A-01R m15327 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15327	SRX1037854	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKLYZ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAKLYZ-01A-01R m15327 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CCTATT.bam	SRR2039441	@dbgap@:reads/SRP012005/SRS945037/SRX1037854/SRR2039441/SRR2039441.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKLYZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAKPEW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAKPEW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKPEW-01A-01R	RNA	EFO	SRS945034	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKPEW-01A-01R m15313 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15313	SRX1037857	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKPEW-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAKPEW-01A-01R m15313 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TCAAGT.bam	SRR2039447	@dbgap@:reads/SRP012005/SRS945034/SRX1037857/SRR2039447/SRR2039447.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKPEW-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAKPEW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAKPEW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKPEW-01A-01R	RNA	EFO	SRS945034	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKPEW-01A-01R m15313 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15313	SRX1037857	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKPEW-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAKPEW-01A-01R m15313 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TCAAGT.bam	SRR2039447	@dbgap@:reads/SRP012005/SRS945034/SRX1037857/SRR2039447/SRR2039447.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKPEW-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAKTCT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAKTCT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKTCT-01A-01R	RNA	EFO	SRS945042	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKTCT-01A-01R m15328 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15328	SRX1037849	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKTCT-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAKTCT-01A-01R m15328 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GTTTGT.bam	SRR2039458	@dbgap@:reads/SRP012005/SRS945042/SRX1037849/SRR2039458/SRR2039458.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKTCT-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAKTCT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAKTCT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAKTCT-01A-01R	RNA	EFO	SRS945042	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAKTCT-01A-01R m15328 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15328	SRX1037849	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAKTCT-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAKTCT-01A-01R m15328 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GTTTGT.bam	SRR2039458	@dbgap@:reads/SRP012005/SRS945042/SRX1037849/SRR2039458/SRR2039458.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAKTCT-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARECB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARECB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARECB-01A-01R	RNA	EFO	SRS553668	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARECB-01A-01R m08586 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08586	SRX465611	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARECB-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARECB-01A-01R m08586 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AAGCTA.bam	SRR1162325	@dbgap@:reads/SRP012005/SRS553668/SRX465611/SRR1162325/SRR1162325.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARECB-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARECB	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARECB-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARECB-01A-01R	RNA	EFO	SRS553668	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARECB-01A-01R m08586 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08586	SRX465611	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARECB-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARECB-01A-01R m08586 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AAGCTA.bam	SRR1162325	@dbgap@:reads/SRP012005/SRS553668/SRX465611/SRR1162325/SRR1162325.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARECB-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAREWI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAREWI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAREWI-01A-02R	RNA	EFO	SRS945033	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAREWI-01A-02R m15329 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15329	SRX1037859	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAREWI-01A-02R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAREWI-01A-02R m15329 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_AGATGT.bam	SRR2039457	@dbgap@:reads/SRP012005/SRS945033/SRX1037859/SRR2039457/SRR2039457.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAREWI-01A-02R.isoform.quantification.txt	3	20
TARGET-52-PAREWI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAREWI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAREWI-01A-02R	RNA	EFO	SRS945033	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAREWI-01A-02R m15329 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15329	SRX1037859	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAREWI-01A-02R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAREWI-01A-02R m15329 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_AGATGT.bam	SRR2039457	@dbgap@:reads/SRP012005/SRS945033/SRX1037859/SRR2039457/SRR2039457.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAREWI-01A-02R.mirna.quantification.txt	3	20
TARGET-52-PARGRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARGRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARGRN-01A-01R	RNA	EFO	SRS553650	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARGRN-01A-01R m08573 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08573	SRX465590	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARGRN-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARGRN-01A-01R m08573 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CGTGAT.bam	SRR1162351	@dbgap@:reads/SRP012005/SRS553650/SRX465590/SRR1162351/SRR1162351.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARGRN-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARGRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARGRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARGRN-01A-01R	RNA	EFO	SRS553650	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARGRN-01A-01R m08573 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08573	SRX465590	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARGRN-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARGRN-01A-01R m08573 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CGTGAT.bam	SRR1162351	@dbgap@:reads/SRP012005/SRS553650/SRX465590/SRR1162351/SRR1162351.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARGRN-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARIRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARIRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARIRN-01A-01R	RNA	EFO	SRS553657	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARIRN-01A-01R m08574 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08574	SRX465597	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARIRN-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARIRN-01A-01R m08574 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CTGATC.bam	SRR1162332	@dbgap@:reads/SRP012005/SRS553657/SRX465597/SRR1162332/SRR1162332.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARIRN-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARIRN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARIRN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARIRN-01A-01R	RNA	EFO	SRS553657	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARIRN-01A-01R m08574 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08574	SRX465597	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARIRN-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARIRN-01A-01R m08574 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CTGATC.bam	SRR1162332	@dbgap@:reads/SRP012005/SRS553657/SRX465597/SRR1162332/SRR1162332.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARIRN-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARKKN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PARKKN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARKKN-01A-01R	RNA	EFO	SRS945035	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARKKN-01A-01R m15314 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15314	SRX1037856	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARKKN-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PARKKN-01A-01R m15314 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_CTGATC.bam	SRR2039450	@dbgap@:reads/SRP012005/SRS945035/SRX1037856/SRR2039450/SRR2039450.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARKKN-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARKKN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PARKKN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARKKN-01A-01R	RNA	EFO	SRS945035	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARKKN-01A-01R m15314 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15314	SRX1037856	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARKKN-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PARKKN-01A-01R m15314 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_CTGATC.bam	SRR2039450	@dbgap@:reads/SRP012005/SRS945035/SRX1037856/SRR2039450/SRR2039450.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARKKN-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARPFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARPFY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARPFY-01A-01R	RNA	EFO	SRS553664	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARPFY-01A-01R m08587 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08587	SRX465607	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARPFY-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARPFY-01A-01R m08587 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CAAGTT.bam	SRR1162328	@dbgap@:reads/SRP012005/SRS553664/SRX465607/SRR1162328/SRR1162328.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARPFY-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARPFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARPFY-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARPFY-01A-01R	RNA	EFO	SRS553664	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARPFY-01A-01R m08587 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08587	SRX465607	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARPFY-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARPFY-01A-01R m08587 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CAAGTT.bam	SRR1162328	@dbgap@:reads/SRP012005/SRS553664/SRX465607/SRR1162328/SRR1162328.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARPFY-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARPFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARPFY-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARPFY-11A-01R	RNA	EFO	SRS601884	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARPFY-11A-01R m11886 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11886	SRX532939	"miRNA-Seq analysis of normal sample TARGET-52-PARPFY-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PARPFY-11A-01R m11886 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_TGTTGG.bam	SRR1270425	@dbgap@:reads/SRP012005/SRS601884/SRX532939/SRR1270425/SRR1270425.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARPFY-11A-01R.isoform.quantification.txt	3	20
TARGET-52-PARPFY	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARPFY-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARPFY-11A-01R	RNA	EFO	SRS601884	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARPFY-11A-01R m11886 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11886	SRX532939	"miRNA-Seq analysis of normal sample TARGET-52-PARPFY-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PARPFY-11A-01R m11886 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_TGTTGG.bam	SRR1270425	@dbgap@:reads/SRP012005/SRS601884/SRX532939/SRR1270425/SRR1270425.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARPFY-11A-01R.mirna.quantification.txt	3	20
TARGET-52-PARRCL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARRCL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARRCL-01A-01R	RNA	EFO	SRS553653	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARRCL-01A-01R m08588 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08588	SRX465593	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARRCL-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARRCL-01A-01R m08588 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCCGGT.bam	SRR1162361	@dbgap@:reads/SRP012005/SRS553653/SRX465593/SRR1162361/SRR1162361.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARRCL-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARRCL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARRCL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARRCL-01A-01R	RNA	EFO	SRS553653	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARRCL-01A-01R m08588 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08588	SRX465593	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARRCL-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARRCL-01A-01R m08588 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCCGGT.bam	SRR1162361	@dbgap@:reads/SRP012005/SRS553653/SRX465593/SRR1162361/SRR1162361.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARRCL-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARRCL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARRCL-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARRCL-11A-01R	RNA	EFO	SRS601885	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARRCL-11A-01R m11887 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11887	SRX532940	"miRNA-Seq analysis of normal sample TARGET-52-PARRCL-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PARRCL-11A-01R m11887 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_AGCTAG.bam	SRR1270422	@dbgap@:reads/SRP012005/SRS601885/SRX532940/SRR1270422/SRR1270422.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARRCL-11A-01R.isoform.quantification.txt	3	20
TARGET-52-PARRCL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARRCL-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARRCL-11A-01R	RNA	EFO	SRS601885	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARRCL-11A-01R m11887 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11887	SRX532940	"miRNA-Seq analysis of normal sample TARGET-52-PARRCL-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PARRCL-11A-01R m11887 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_AGCTAG.bam	SRR1270422	@dbgap@:reads/SRP012005/SRS601885/SRX532940/SRR1270422/SRR1270422.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARRCL-11A-01R.mirna.quantification.txt	3	20
TARGET-52-PARTKH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PARTKH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARTKH-01A-01R	RNA	EFO	SRS945052	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARTKH-01A-01R m15309 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15309	SRX1037839	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARTKH-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PARTKH-01A-01R m15309 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TGGTCA.bam	SRR2039462	@dbgap@:reads/SRP012005/SRS945052/SRX1037839/SRR2039462/SRR2039462.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARTKH-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARTKH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PARTKH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARTKH-01A-01R	RNA	EFO	SRS945052	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARTKH-01A-01R m15309 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15309	SRX1037839	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARTKH-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PARTKH-01A-01R m15309 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TGGTCA.bam	SRR2039462	@dbgap@:reads/SRP012005/SRS945052/SRX1037839/SRR2039462/SRR2039462.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARTKH-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARUGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARUGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARUGK-01A-01R	RNA	EFO	SRS553671	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARUGK-01A-01R m08575 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08575	SRX465614	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARUGK-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARUGK-01A-01R m08575 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_GGGGTT.bam	SRR1162346	@dbgap@:reads/SRP012005/SRS553671/SRX465614/SRR1162346/SRR1162346.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARUGK-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PARUGK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARUGK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARUGK-01A-01R	RNA	EFO	SRS553671	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARUGK-01A-01R m08575 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08575	SRX465614	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARUGK-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARUGK-01A-01R m08575 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_GGGGTT.bam	SRR1162346	@dbgap@:reads/SRP012005/SRS553671/SRX465614/SRR1162346/SRR1162346.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARUGK-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PARZBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARZBI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARZBI-01A-02R	RNA	EFO	SRS553645	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARZBI-01A-02R m08603 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08603	SRX465583	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARZBI-01A-02R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARZBI-01A-02R m08603 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_CATGGG.bam	SRR1162348	@dbgap@:reads/SRP012005/SRS553645/SRX465583/SRR1162348/SRR1162348.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARZBI-01A-02R.isoform.quantification.txt	3	20
TARGET-52-PARZBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARZBI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARZBI-01A-02R	RNA	EFO	SRS553645	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARZBI-01A-02R m08603 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08603	SRX465583	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARZBI-01A-02R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PARZBI-01A-02R m08603 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_CATGGG.bam	SRR1162348	@dbgap@:reads/SRP012005/SRS553645/SRX465583/SRR1162348/SRR1162348.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARZBI-01A-02R.mirna.quantification.txt	3	20
TARGET-52-PARZBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARZBI-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARZBI-11A-01R	RNA	EFO	SRS601886	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARZBI-11A-01R m11890 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11890	SRX532941	"miRNA-Seq analysis of normal sample TARGET-52-PARZBI-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PARZBI-11A-01R m11890 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_CATTCA.bam	SRR1270427	@dbgap@:reads/SRP012005/SRS601886/SRX532941/SRR1270427/SRR1270427.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARZBI-11A-01R.isoform.quantification.txt	3	20
TARGET-52-PARZBI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PARZBI-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARZBI-11A-01R	RNA	EFO	SRS601886	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARZBI-11A-01R m11890 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11890	SRX532941	"miRNA-Seq analysis of normal sample TARGET-52-PARZBI-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PARZBI-11A-01R m11890 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_CATTCA.bam	SRR1270427	@dbgap@:reads/SRP012005/SRS601886/SRX532941/SRR1270427/SRR1270427.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARZBI-11A-01R.mirna.quantification.txt	3	20
TARGET-52-PARZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PARZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARZRH-01A-02R	RNA	EFO	SRS945039	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARZRH-01A-02R m15323 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15323	SRX1037852	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARZRH-01A-02R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PARZRH-01A-02R m15323 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CAAGTT.bam	SRR2039442	@dbgap@:reads/SRP012005/SRS945039/SRX1037852/SRR2039442/SRR2039442.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARZRH-01A-02R.isoform.quantification.txt	3	20
TARGET-52-PARZRH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PARZRH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PARZRH-01A-02R	RNA	EFO	SRS945039	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PARZRH-01A-02R m15323 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15323	SRX1037852	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PARZRH-01A-02R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PARZRH-01A-02R m15323 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CAAGTT.bam	SRR2039442	@dbgap@:reads/SRP012005/SRS945039/SRX1037852/SRR2039442/SRR2039442.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PARZRH-01A-02R.mirna.quantification.txt	3	20
TARGET-52-PASABD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASABD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASABD-01A-01R	RNA	EFO	SRS553677	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASABD-01A-01R m08576 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08576	SRX465623	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASABD-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASABD-01A-01R m08576 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CTGGGT.bam	SRR1162320	@dbgap@:reads/SRP012005/SRS553677/SRX465623/SRR1162320/SRR1162320.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASABD-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASABD	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASABD-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASABD-01A-01R	RNA	EFO	SRS553677	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASABD-01A-01R m08576 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08576	SRX465623	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASABD-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASABD-01A-01R m08576 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CTGGGT.bam	SRR1162320	@dbgap@:reads/SRP012005/SRS553677/SRX465623/SRR1162320/SRR1162320.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASABD-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASADZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASADZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASADZ-01A-01R	RNA	EFO	SRS553675	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASADZ-01A-01R m08577 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08577	SRX465619	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASADZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASADZ-01A-01R m08577 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AGCGCT.bam	SRR1162323	@dbgap@:reads/SRP012005/SRS553675/SRX465619/SRR1162323/SRR1162323.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASADZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASADZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASADZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASADZ-01A-01R	RNA	EFO	SRS553675	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASADZ-01A-01R m08577 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08577	SRX465619	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASADZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASADZ-01A-01R m08577 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AGCGCT.bam	SRR1162323	@dbgap@:reads/SRP012005/SRS553675/SRX465619/SRR1162323/SRR1162323.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASADZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASAMZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASAMZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASAMZ-01A-01R	RNA	EFO	SRS945045	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASAMZ-01A-01R m15315 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15315	SRX1037846	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASAMZ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASAMZ-01A-01R m15315 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_AAGCTA.bam	SRR2039449	@dbgap@:reads/SRP012005/SRS945045/SRX1037846/SRR2039449/SRR2039449.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASAMZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASAMZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASAMZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASAMZ-01A-01R	RNA	EFO	SRS945045	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASAMZ-01A-01R m15315 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15315	SRX1037846	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASAMZ-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASAMZ-01A-01R m15315 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_AAGCTA.bam	SRR2039449	@dbgap@:reads/SRP012005/SRS945045/SRX1037846/SRR2039449/SRR2039449.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASAMZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASCDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASCDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASCDH-01A-01R	RNA	EFO	SRS553670	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASCDH-01A-01R m08578 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08578	SRX465613	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASCDH-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASCDH-01A-01R m08578 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CTTTTG.bam	SRR1162334	@dbgap@:reads/SRP012005/SRS553670/SRX465613/SRR1162334/SRR1162334.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASCDH-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASCDH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASCDH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASCDH-01A-01R	RNA	EFO	SRS553670	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASCDH-01A-01R m08578 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08578	SRX465613	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASCDH-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASCDH-01A-01R m08578 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CTTTTG.bam	SRR1162334	@dbgap@:reads/SRP012005/SRS553670/SRX465613/SRR1162334/SRR1162334.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASCDH-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASDLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASDLA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASDLA-01A-01R	RNA	EFO	SRS553651	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASDLA-01A-01R m08589 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08589	SRX465591	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASDLA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASDLA-01A-01R m08589 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_CGGCCT.bam	SRR1162335	@dbgap@:reads/SRP012005/SRS553651/SRX465591/SRR1162335/SRR1162335.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASDLA-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASDLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASDLA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASDLA-01A-01R	RNA	EFO	SRS553651	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASDLA-01A-01R m08589 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08589	SRX465591	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASDLA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASDLA-01A-01R m08589 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_CGGCCT.bam	SRR1162335	@dbgap@:reads/SRP012005/SRS553651/SRX465591/SRR1162335/SRR1162335.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASDLA-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASDLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASDLA-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASDLA-11A-01R	RNA	EFO	SRS601887	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASDLA-11A-01R m11888 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11888	SRX532942	"miRNA-Seq analysis of normal sample TARGET-52-PASDLA-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PASDLA-11A-01R m11888 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_AGCATC.bam	SRR1270423	@dbgap@:reads/SRP012005/SRS601887/SRX532942/SRR1270423/SRR1270423.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASDLA-11A-01R.isoform.quantification.txt	3	20
TARGET-52-PASDLA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASDLA-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASDLA-11A-01R	RNA	EFO	SRS601887	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASDLA-11A-01R m11888 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11888	SRX532942	"miRNA-Seq analysis of normal sample TARGET-52-PASDLA-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PASDLA-11A-01R m11888 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_AGCATC.bam	SRR1270423	@dbgap@:reads/SRP012005/SRS601887/SRX532942/SRR1270423/SRR1270423.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASDLA-11A-01R.mirna.quantification.txt	3	20
TARGET-52-PASGCL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASGCL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASGCL-01A-02R	RNA	EFO	SRS945048	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASGCL-01A-02R m15310 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15310	SRX1037843	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASGCL-01A-02R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASGCL-01A-02R m15310 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_CACTGT.bam	SRR2039445	@dbgap@:reads/SRP012005/SRS945048/SRX1037843/SRR2039445/SRR2039445.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASGCL-01A-02R.isoform.quantification.txt	3	20
TARGET-52-PASGCL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASGCL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASGCL-01A-02R	RNA	EFO	SRS945048	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASGCL-01A-02R m15310 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15310	SRX1037843	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASGCL-01A-02R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASGCL-01A-02R m15310 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_CACTGT.bam	SRR2039445	@dbgap@:reads/SRP012005/SRS945048/SRX1037843/SRR2039445/SRR2039445.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASGCL-01A-02R.mirna.quantification.txt	3	20
TARGET-52-PASGGN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASGGN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASGGN-01A-01R	RNA	EFO	SRS945046	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASGGN-01A-01R m15316 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15316	SRX1037844	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASGGN-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASGGN-01A-01R m15316 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GTAGCC.bam	SRR2039443	@dbgap@:reads/SRP012005/SRS945046/SRX1037844/SRR2039443/SRR2039443.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASGGN-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASGGN	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASGGN-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASGGN-01A-01R	RNA	EFO	SRS945046	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASGGN-01A-01R m15316 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15316	SRX1037844	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASGGN-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASGGN-01A-01R m15316 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GTAGCC.bam	SRR2039443	@dbgap@:reads/SRP012005/SRS945046/SRX1037844/SRR2039443/SRR2039443.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASGGN-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASILR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASILR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASILR-01A-01R	RNA	EFO	SRS945050	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASILR-01A-01R m15317 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15317	SRX1037841	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASILR-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASILR-01A-01R m15317 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TACAAG.bam	SRR2039463	@dbgap@:reads/SRP012005/SRS945050/SRX1037841/SRR2039463/SRR2039463.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASILR-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASILR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASILR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASILR-01A-01R	RNA	EFO	SRS945050	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASILR-01A-01R m15317 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15317	SRX1037841	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASILR-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASILR-01A-01R m15317 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TACAAG.bam	SRR2039463	@dbgap@:reads/SRP012005/SRS945050/SRX1037841/SRR2039463/SRR2039463.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASILR-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASNED	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASNED-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASNED-01A-01R	RNA	EFO	SRS945041	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASNED-01A-01R m15324 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15324	SRX1037850	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASNED-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASNED-01A-01R m15324 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_AGTCTT.bam	SRR2039459	@dbgap@:reads/SRP012005/SRS945041/SRX1037850/SRR2039459/SRR2039459.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASNED-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASNED	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASNED-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASNED-01A-01R	RNA	EFO	SRS945041	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASNED-01A-01R m15324 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15324	SRX1037850	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASNED-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASNED-01A-01R m15324 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_AGTCTT.bam	SRR2039459	@dbgap@:reads/SRP012005/SRS945041/SRX1037850/SRR2039459/SRR2039459.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASNED-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASRHU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASRHU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASRHU-01A-02R	RNA	EFO	SRS553669	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASRHU-01A-02R m08590 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08590	SRX465612	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASRHU-01A-02R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASRHU-01A-02R m08590 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_TAGTTG.bam	SRR1162327	@dbgap@:reads/SRP012005/SRS553669/SRX465612/SRR1162327/SRR1162327.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASRHU-01A-02R.isoform.quantification.txt	3	20
TARGET-52-PASRHU	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASRHU-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASRHU-01A-02R	RNA	EFO	SRS553669	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASRHU-01A-02R m08590 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08590	SRX465612	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASRHU-01A-02R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASRHU-01A-02R m08590 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_TAGTTG.bam	SRR1162327	@dbgap@:reads/SRP012005/SRS553669/SRX465612/SRR1162327/SRR1162327.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASRHU-01A-02R.mirna.quantification.txt	3	20
TARGET-52-PASVDP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASVDP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASVDP-01A-01R	RNA	EFO	SRS553647	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASVDP-01A-01R m08579 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08579	SRX465587	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASVDP-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASVDP-01A-01R m08579 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_TGTTGG.bam	SRR1162343	@dbgap@:reads/SRP012005/SRS553647/SRX465587/SRR1162343/SRR1162343.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASVDP-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASVDP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASVDP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASVDP-01A-01R	RNA	EFO	SRS553647	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASVDP-01A-01R m08579 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08579	SRX465587	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASVDP-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASVDP-01A-01R m08579 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_TGTTGG.bam	SRR1162343	@dbgap@:reads/SRP012005/SRS553647/SRX465587/SRR1162343/SRR1162343.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASVDP-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASWZZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASWZZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASWZZ-01A-01R	RNA	EFO	SRS553656	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASWZZ-01A-01R m08580 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08580	SRX465598	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASWZZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASWZZ-01A-01R m08580 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AGCTAG.bam	SRR1162354	@dbgap@:reads/SRP012005/SRS553656/SRX465598/SRR1162354/SRR1162354.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASWZZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASWZZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASWZZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASWZZ-01A-01R	RNA	EFO	SRS553656	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASWZZ-01A-01R m08580 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08580	SRX465598	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASWZZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASWZZ-01A-01R m08580 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AGCTAG.bam	SRR1162354	@dbgap@:reads/SRP012005/SRS553656/SRX465598/SRR1162354/SRR1162354.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASWZZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASXGF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASXGF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASXGF-01A-01R	RNA	EFO	SRS945053	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASXGF-01A-01R m15318 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15318	SRX1037838	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASXGF-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASXGF-01A-01R m15318 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_ATGTTT.bam	SRR2039444	@dbgap@:reads/SRP012005/SRS945053/SRX1037838/SRR2039444/SRR2039444.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASXGF-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASXGF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PASXGF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASXGF-01A-01R	RNA	EFO	SRS945053	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASXGF-01A-01R m15318 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15318	SRX1037838	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASXGF-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PASXGF-01A-01R m15318 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_ATGTTT.bam	SRR2039444	@dbgap@:reads/SRP012005/SRS945053/SRX1037838/SRR2039444/SRR2039444.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASXGF-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASXNA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASXNA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASXNA-01A-01R	RNA	EFO	SRS553674	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASXNA-01A-01R m08591 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08591	SRX465617	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASXNA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASXNA-01A-01R m08591 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCGTGG.bam	SRR1162338	@dbgap@:reads/SRP012005/SRS553674/SRX465617/SRR1162338/SRR1162338.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASXNA-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASXNA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASXNA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASXNA-01A-01R	RNA	EFO	SRS553674	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASXNA-01A-01R m08591 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08591	SRX465617	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASXNA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASXNA-01A-01R m08591 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCGTGG.bam	SRR1162338	@dbgap@:reads/SRP012005/SRS553674/SRX465617/SRR1162338/SRR1162338.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASXNA-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASXNA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASXNA-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASXNA-11A-01R	RNA	EFO	SRS601883	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASXNA-11A-01R m11889 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11889	SRX532938	"miRNA-Seq analysis of normal sample TARGET-52-PASXNA-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PASXNA-11A-01R m11889 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_CGATTA.bam	SRR1270424	@dbgap@:reads/SRP012005/SRS601883/SRX532938/SRR1270424/SRR1270424.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASXNA-11A-01R.isoform.quantification.txt	3	20
TARGET-52-PASXNA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASXNA-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASXNA-11A-01R	RNA	EFO	SRS601883	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASXNA-11A-01R m11889 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11889	SRX532938	"miRNA-Seq analysis of normal sample TARGET-52-PASXNA-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PASXNA-11A-01R m11889 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_CGATTA.bam	SRR1270424	@dbgap@:reads/SRP012005/SRS601883/SRX532938/SRR1270424/SRR1270424.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASXNA-11A-01R.mirna.quantification.txt	3	20
TARGET-52-PASYNF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASYNF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASYNF-01A-01R	RNA	EFO	SRS553663	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASYNF-01A-01R m08604 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08604	SRX465606	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASYNF-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASYNF-01A-01R m08604 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TCTGAG.bam	SRR1162344	@dbgap@:reads/SRP012005/SRS553663/SRX465606/SRR1162344/SRR1162344.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASYNF-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASYNF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASYNF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASYNF-01A-01R	RNA	EFO	SRS553663	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASYNF-01A-01R m08604 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08604	SRX465606	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASYNF-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASYNF-01A-01R m08604 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TCTGAG.bam	SRR1162344	@dbgap@:reads/SRP012005/SRS553663/SRX465606/SRR1162344/SRR1162344.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASYNF-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PASZYE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASZYE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASZYE-01A-01R	RNA	EFO	SRS553661	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASZYE-01A-01R m08581 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08581	SRX465602	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASZYE-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASZYE-01A-01R m08581 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AGCATC.bam	SRR1162349	@dbgap@:reads/SRP012005/SRS553661/SRX465602/SRR1162349/SRR1162349.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASZYE-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PASZYE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PASZYE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PASZYE-01A-01R	RNA	EFO	SRS553661	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PASZYE-01A-01R m08581 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08581	SRX465602	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PASZYE-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PASZYE-01A-01R m08581 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_AGCATC.bam	SRR1162349	@dbgap@:reads/SRP012005/SRS553661/SRX465602/SRR1162349/SRR1162349.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PASZYE-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATAFT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATAFT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATAFT-01A-01R	RNA	EFO	SRS553666	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATAFT-01A-01R m08592 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08592	SRX465609	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATAFT-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATAFT-01A-01R m08592 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GTATAG.bam	SRR1162337	@dbgap@:reads/SRP012005/SRS553666/SRX465609/SRR1162337/SRR1162337.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATAFT-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATAFT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATAFT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATAFT-01A-01R	RNA	EFO	SRS553666	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATAFT-01A-01R m08592 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08592	SRX465609	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATAFT-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATAFT-01A-01R m08592 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GTATAG.bam	SRR1162337	@dbgap@:reads/SRP012005/SRS553666/SRX465609/SRR1162337/SRR1162337.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATAFT-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATBLF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATBLF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATBLF-01A-01R	RNA	EFO	SRS553660	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATBLF-01A-01R m08582 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08582	SRX465601	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATBLF-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATBLF-01A-01R m08582 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CGATTA.bam	SRR1162324	@dbgap@:reads/SRP012005/SRS553660/SRX465601/SRR1162324/SRR1162324.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATBLF-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATBLF	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATBLF-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATBLF-01A-01R	RNA	EFO	SRS553660	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATBLF-01A-01R m08582 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08582	SRX465601	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATBLF-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATBLF-01A-01R m08582 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CGATTA.bam	SRR1162324	@dbgap@:reads/SRP012005/SRS553660/SRX465601/SRR1162324/SRR1162324.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATBLF-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATDVL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATDVL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATDVL-01A-01R	RNA	EFO	SRS553673	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATDVL-01A-01R m08583 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08583	SRX465618	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATDVL-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATDVL-01A-01R m08583 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CATTCA.bam	SRR1162360	@dbgap@:reads/SRP012005/SRS553673/SRX465618/SRR1162360/SRR1162360.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATDVL-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATDVL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATDVL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATDVL-01A-01R	RNA	EFO	SRS553673	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATDVL-01A-01R m08583 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08583	SRX465618	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATDVL-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATDVL-01A-01R m08583 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_CATTCA.bam	SRR1162360	@dbgap@:reads/SRP012005/SRS553673/SRX465618/SRR1162360/SRR1162360.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATDVL-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATENH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATENH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATENH-01A-01R	RNA	EFO	SRS553649	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATENH-01A-01R m08593 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08593	SRX465589	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATENH-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATENH-01A-01R m08593 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_CCTTGC.bam	SRR1162339	@dbgap@:reads/SRP012005/SRS553649/SRX465589/SRR1162339/SRR1162339.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATENH-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATENH	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATENH-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATENH-01A-01R	RNA	EFO	SRS553649	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATENH-01A-01R m08593 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08593	SRX465589	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATENH-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATENH-01A-01R m08593 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_CCTTGC.bam	SRR1162339	@dbgap@:reads/SRP012005/SRS553649/SRX465589/SRR1162339/SRR1162339.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATENH-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATFXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATFXW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATFXW-01A-01R	RNA	EFO	SRS553644	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATFXW-01A-01R m08584 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08584	SRX465584	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATFXW-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATFXW-01A-01R m08584 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_GGAACT.bam	SRR1162352	@dbgap@:reads/SRP012005/SRS553644/SRX465584/SRR1162352/SRR1162352.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATFXW-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATFXW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATFXW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATFXW-01A-01R	RNA	EFO	SRS553644	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATFXW-01A-01R m08584 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08584	SRX465584	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATFXW-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATFXW-01A-01R m08584 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_GGAACT.bam	SRR1162352	@dbgap@:reads/SRP012005/SRS553644/SRX465584/SRR1162352/SRR1162352.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATFXW-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATFZZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATFZZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATFZZ-01A-01R	RNA	EFO	SRS553646	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATFZZ-01A-01R m08585 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08585	SRX465585	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATFZZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATFZZ-01A-01R m08585 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_ACATCG.bam	SRR1162342	@dbgap@:reads/SRP012005/SRS553646/SRX465585/SRR1162342/SRR1162342.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATFZZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATFZZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATFZZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATFZZ-01A-01R	RNA	EFO	SRS553646	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATFZZ-01A-01R m08585 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08585	SRX465585	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATFZZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATFZZ-01A-01R m08585 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AU5ACXX_7_ACATCG.bam	SRR1162342	@dbgap@:reads/SRP012005/SRS553646/SRX465585/SRR1162342/SRR1162342.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATFZZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATXEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATXEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATXEE-01A-01R	RNA	EFO	SRS553643	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATXEE-01A-01R m08594 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08594	SRX465581	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATXEE-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATXEE-01A-01R m08594 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCTGTA.bam	SRR1162326	@dbgap@:reads/SRP012005/SRS553643/SRX465581/SRR1162326/SRR1162326.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATXEE-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATXEE	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATXEE-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATXEE-01A-01R	RNA	EFO	SRS553643	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATXEE-01A-01R m08594 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08594	SRX465581	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATXEE-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATXEE-01A-01R m08594 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_GCTGTA.bam	SRR1162326	@dbgap@:reads/SRP012005/SRS553643/SRX465581/SRR1162326/SRR1162326.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATXEE-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATXKA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATXKA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATXKA-01A-01R	RNA	EFO	SRS553648	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATXKA-01A-01R m08595 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08595	SRX465588	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATXKA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATXKA-01A-01R m08595 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_ATGGCA.bam	SRR1162331	@dbgap@:reads/SRP012005/SRS553648/SRX465588/SRR1162331/SRR1162331.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATXKA-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATXKA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PATXKA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATXKA-01A-01R	RNA	EFO	SRS553648	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATXKA-01A-01R m08595 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08595	SRX465588	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATXKA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PATXKA-01A-01R m08595 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_1_ATGGCA.bam	SRR1162331	@dbgap@:reads/SRP012005/SRS553648/SRX465588/SRR1162331/SRR1162331.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATXKA-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PATYUA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PATYUA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATYUA-01A-01R	RNA	EFO	SRS945031	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATYUA-01A-01R m15319 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15319	SRX1037860	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATYUA-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PATYUA-01A-01R m15319 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TGCTTT.bam	SRR2039451	@dbgap@:reads/SRP012005/SRS945031/SRX1037860/SRR2039451/SRR2039451.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATYUA-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PATYUA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PATYUA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PATYUA-01A-01R	RNA	EFO	SRS945031	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PATYUA-01A-01R m15319 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15319	SRX1037860	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PATYUA-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PATYUA-01A-01R m15319 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_TGCTTT.bam	SRR2039451	@dbgap@:reads/SRP012005/SRS945031/SRX1037860/SRR2039451/SRR2039451.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PATYUA-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUCGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUCGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUCGJ-01A-01R	RNA	EFO	SRS553642	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUCGJ-01A-01R m08606 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08606	SRX465582	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUCGJ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUCGJ-01A-01R m08606 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_ATTATA.bam	SRR1162329	@dbgap@:reads/SRP012005/SRS553642/SRX465582/SRR1162329/SRR1162329.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUCGJ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUCGJ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUCGJ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUCGJ-01A-01R	RNA	EFO	SRS553642	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUCGJ-01A-01R m08606 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08606	SRX465582	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUCGJ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUCGJ-01A-01R m08606 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_ATTATA.bam	SRR1162329	@dbgap@:reads/SRP012005/SRS553642/SRX465582/SRR1162329/SRR1162329.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUCGJ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUDPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUDPV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUDPV-01A-01R	RNA	EFO	SRS553652	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUDPV-01A-01R m08607 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08607	SRX465592	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUDPV-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUDPV-01A-01R m08607 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_CCAGCA.bam	SRR1162350	@dbgap@:reads/SRP012005/SRS553652/SRX465592/SRR1162350/SRR1162350.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUDPV-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUDPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUDPV-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUDPV-01A-01R	RNA	EFO	SRS553652	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUDPV-01A-01R m08607 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08607	SRX465592	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUDPV-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUDPV-01A-01R m08607 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_CCAGCA.bam	SRR1162350	@dbgap@:reads/SRP012005/SRS553652/SRX465592/SRR1162350/SRR1162350.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUDPV-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUDPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUDPV-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUDPV-11A-01R	RNA	EFO	SRS601882	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUDPV-11A-01R m11891 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11891	SRX532937	"miRNA-Seq analysis of normal sample TARGET-52-PAUDPV-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PAUDPV-11A-01R m11891 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_GGAACT.bam	SRR1270426	@dbgap@:reads/SRP012005/SRS601882/SRX532937/SRR1270426/SRR1270426.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUDPV-11A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUDPV	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUDPV-11A	organism part	EFO	Normal Tissue	NCIt	"Solid Tissue Normal"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUDPV-11A-01R	RNA	EFO	SRS601882	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUDPV-11A-01R m11891 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m11891	SRX532937	"miRNA-Seq analysis of normal sample TARGET-52-PAUDPV-11A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2014-01-20	TARGET-52-PAUDPV-11A-01R m11891 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.17.21.3	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C36BCACXX_5_GGAACT.bam	SRR1270426	@dbgap@:reads/SRP012005/SRS601882/SRX532937/SRR1270426/SRR1270426.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUDPV-11A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUEKW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUEKW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUEKW-01A-01R	RNA	EFO	SRS553659	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUEKW-01A-01R m08608 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08608	SRX465600	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUEKW-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUEKW-01A-01R m08608 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_GGACGG.bam	SRR1162359	@dbgap@:reads/SRP012005/SRS553659/SRX465600/SRR1162359/SRR1162359.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUEKW-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUEKW	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUEKW-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUEKW-01A-01R	RNA	EFO	SRS553659	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUEKW-01A-01R m08608 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08608	SRX465600	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUEKW-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUEKW-01A-01R m08608 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_GGACGG.bam	SRR1162359	@dbgap@:reads/SRP012005/SRS553659/SRX465600/SRR1162359/SRR1162359.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUEKW-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUFVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUFVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUFVP-01A-01R	RNA	EFO	SRS553658	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUFVP-01A-01R m08609 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08609	SRX465599	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUFVP-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUFVP-01A-01R m08609 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TGGTCA.bam	SRR1162357	@dbgap@:reads/SRP012005/SRS553658/SRX465599/SRR1162357/SRR1162357.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUFVP-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUFVP	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUFVP-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUFVP-01A-01R	RNA	EFO	SRS553658	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUFVP-01A-01R m08609 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08609	SRX465599	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUFVP-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUFVP-01A-01R m08609 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TGGTCA.bam	SRR1162357	@dbgap@:reads/SRP012005/SRS553658/SRX465599/SRR1162357/SRR1162357.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUFVP-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUGYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUGYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUGYZ-01A-01R	RNA	EFO	SRS553654	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUGYZ-01A-01R m08610 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08610	SRX465594	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUGYZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUGYZ-01A-01R m08610 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TACAAG.bam	SRR1162363	@dbgap@:reads/SRP012005/SRS553654/SRX465594/SRR1162363/SRR1162363.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUGYZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUGYZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUGYZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUGYZ-01A-01R	RNA	EFO	SRS553654	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUGYZ-01A-01R m08610 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08610	SRX465594	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUGYZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUGYZ-01A-01R m08610 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TACAAG.bam	SRR1162363	@dbgap@:reads/SRP012005/SRS553654/SRX465594/SRR1162363/SRR1162363.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUGYZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUHAZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUHAZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUHAZ-01A-01R	RNA	EFO	SRS553662	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUHAZ-01A-01R m08611 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08611	SRX465604	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUHAZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUHAZ-01A-01R m08611 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TCGCTT.bam	SRR1162330	@dbgap@:reads/SRP012005/SRS553662/SRX465604/SRR1162330/SRR1162330.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUHAZ-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUHAZ	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUHAZ-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUHAZ-01A-01R	RNA	EFO	SRS553662	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUHAZ-01A-01R m08611 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08611	SRX465604	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUHAZ-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUHAZ-01A-01R m08611 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_TCGCTT.bam	SRR1162330	@dbgap@:reads/SRP012005/SRS553662/SRX465604/SRR1162330/SRR1162330.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUHAZ-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAUNPA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUNPA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUNPA-01A-01R	RNA	EFO	SRS553655	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUNPA-01A-01R m08612 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08612	SRX465596	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUNPA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUNPA-01A-01R m08612 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_GAGAGT.bam	SRR1162362	@dbgap@:reads/SRP012005/SRS553655/SRX465596/SRR1162362/SRR1162362.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUNPA-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAUNPA	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Discovery	TARGET-52-PAUNPA-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAUNPA-01A-01R	RNA	EFO	SRS553655	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAUNPA-01A-01R m08612 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m08612	SRX465596	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAUNPA-01A-01R using Illumina HiSeq 2000"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2000:01	BCCA	2012-11-13	TARGET-52-PAUNPA-01A-01R m08612 run	sequencing assay	EFO	22	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01		bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C1AKFACXX_2_GAGAGT.bam	SRR1162362	@dbgap@:reads/SRP012005/SRS553655/SRX465596/SRR1162362/SRR1162362.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAUNPA-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAVCKS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVCKS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVCKS-01A-01R	RNA	EFO	SRS945032	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVCKS-01A-01R m15306 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15306	SRX1037858	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVCKS-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVCKS-01A-01R m15306 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_CGTGAT.bam	SRR2039452	@dbgap@:reads/SRP012005/SRS945032/SRX1037858/SRR2039452/SRR2039452.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVCKS-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAVCKS	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVCKS-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVCKS-01A-01R	RNA	EFO	SRS945032	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVCKS-01A-01R m15306 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15306	SRX1037858	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVCKS-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVCKS-01A-01R m15306 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_CGTGAT.bam	SRR2039452	@dbgap@:reads/SRP012005/SRS945032/SRX1037858/SRR2039452/SRR2039452.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVCKS-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAVDPR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVDPR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVDPR-01A-01R	RNA	EFO	SRS945047	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVDPR-01A-01R m15320 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15320	SRX1037845	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVDPR-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVDPR-01A-01R m15320 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GCATTT.bam	SRR2039446	@dbgap@:reads/SRP012005/SRS945047/SRX1037845/SRR2039446/SRR2039446.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVDPR-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAVDPR	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVDPR-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVDPR-01A-01R	RNA	EFO	SRS945047	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVDPR-01A-01R m15320 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15320	SRX1037845	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVDPR-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVDPR-01A-01R m15320 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GCATTT.bam	SRR2039446	@dbgap@:reads/SRP012005/SRS945047/SRX1037845/SRR2039446/SRR2039446.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVDPR-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAVITI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVITI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVITI-01A-01R	RNA	EFO	SRS945036	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVITI-01A-01R m15307 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15307	SRX1037855	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVITI-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVITI-01A-01R m15307 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_ACATCG.bam	SRR2039456	@dbgap@:reads/SRP012005/SRS945036/SRX1037855/SRR2039456/SRR2039456.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVITI-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAVITI	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	female	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVITI-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVITI-01A-01R	RNA	EFO	SRS945036	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVITI-01A-01R m15307 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15307	SRX1037855	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVITI-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVITI-01A-01R m15307 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_ACATCG.bam	SRR2039456	@dbgap@:reads/SRP012005/SRS945036/SRX1037855/SRR2039456/SRR2039456.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVITI-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAVVIT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVVIT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVVIT-01A-01R	RNA	EFO	SRS945051	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVVIT-01A-01R m15321 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15321	SRX1037840	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVVIT-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVVIT-01A-01R m15321 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CGTACG.bam	SRR2039464	@dbgap@:reads/SRP012005/SRS945051/SRX1037840/SRR2039464/SRR2039464.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVVIT-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAVVIT	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAVVIT-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAVVIT-01A-01R	RNA	EFO	SRS945051	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAVVIT-01A-01R m15321 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15321	SRX1037840	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAVVIT-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAVVIT-01A-01R m15321 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_CGTACG.bam	SRR2039464	@dbgap@:reads/SRP012005/SRS945051/SRX1037840/SRR2039464/SRR2039464.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAVVIT-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAWFBL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAWFBL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAWFBL-01A-01R	RNA	EFO	SRS945040	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAWFBL-01A-01R m15308 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15308	SRX1037851	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAWFBL-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAWFBL-01A-01R m15308 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GCCTAA.bam	SRR2039455	@dbgap@:reads/SRP012005/SRS945040/SRX1037851/SRR2039455/SRR2039455.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAWFBL-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAWFBL	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAWFBL-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAWFBL-01A-01R	RNA	EFO	SRS945040	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAWFBL-01A-01R m15308 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15308	SRX1037851	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAWFBL-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAWFBL-01A-01R m15308 run	sequencing assay	EFO	24	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_6_GCCTAA.bam	SRR2039455	@dbgap@:reads/SRP012005/SRS945040/SRX1037851/SRR2039455/SRR2039455.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAWFBL-01A-01R.mirna.quantification.txt	3	20
TARGET-52-PAWFWK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAWFWK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAWFWK-01A-01R	RNA	EFO	SRS945043	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAWFWK-01A-01R m15322 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15322	SRX1037848	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAWFWK-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAWFWK-01A-01R m15322 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GGGGTT.bam	SRR2039465	@dbgap@:reads/SRP012005/SRS945043/SRX1037848/SRR2039465/SRR2039465.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAWFWK-01A-01R.isoform.quantification.txt	3	20
TARGET-52-PAWFWK	Children's Oncology Group	whole organism	EFO	Homo sapiens	NCBITaxon	male	NCIt	Rhabdoid Tumor of the Kidney	NCIt	Validation	TARGET-52-PAWFWK-01A	organism part	EFO	Solid Tumor	NCIt	"Primary Solid Tumor"	nationwidechildrens.org:Protocol:RNA-Extraction-Qiagen-AllPrep:01	Nationwide Children's Hospital Biospecimen Core Repository	TARGET-52-PAWFWK-01A-01R	RNA	EFO	SRS945043	bcgsc.ca:Protocol:miRNAseq-LibraryPrep-Illumina:01	BC Cancer Agency Michael Smith Genome Sciences Centre	TARGET-52-PAWFWK-01A-01R m15322 library	SINGLE	TRANSCRIPTOMIC	miRNA-Seq	size fractionation	m15322	SRX1037848	"miRNA-Seq analysis of rhabdoid tumor sample TARGET-52-PAWFWK-01A-01R using Illumina HiSeq 2500"	bcgsc.ca:Protocol:miRNAseq-Sequence-Illumina-HiSeq2500:01	BCCA	2014-12-18	TARGET-52-PAWFWK-01A-01R m15322 run	sequencing assay	EFO	23	bcgsc.ca:Protocol:miRNAseq-BaseCall-Illumina:01	Illumina RTA 1.18.61.0	bcgsc.ca:Protocol:miRNAseq-ReadAlign-BWA-Picard:01	C5JC1ACXX_7_GGGGTT.bam	SRR2039465	@dbgap@:reads/SRP012005/SRS945043/SRX1037848/SRR2039465/SRR2039465.sra	2	GRCh37-lite	bcgsc.ca:Protocol:miRNAseq-Expression:01	TARGET-52-PAWFWK-01A-01R.mirna.quantification.txt	3	20
