Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	3208470	52036470	25650	0.1759
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	52036652	114214172	38078	-0.3518
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	114214190	145143007	3823	-0.7687
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	145797774	212327840	39810	-0.0325
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	212327973	212624479	226	-1.4538
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	212626063	236731393	15776	-0.0312
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	236731497	237540769	609	-0.349
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	1	237545691	245880329	4825	-0.0499
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	474222	70192413	40892	-0.0484
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	70195079	70197594	2	-3.1298
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	70198623	88848116	9295	-0.0471
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	88848602	88853086	3	2.2523
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	88853846	88911868	46	0.0654
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	94705427	95913829	262	0.4301
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	95916644	95919049	2	2.4878
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	95922001	95976626	19	0.4308
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	95984407	96048603	13	1.3482
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	96083086	96853597	261	0.4583
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	96856084	97077500	100	3.7277
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	97643754	98479783	472	1.4281
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	98483773	137223679	19777	-0.0508
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	137223953	137224159	2	-2.3173
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	2	137227532	242124735	59983	-0.0339
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	526235	8499289	3515	-0.4032
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	8499569	8499788	2	-2.4551
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	8500702	61673615	30213	-0.3784
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	61673801	61714203	19	-0.875
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	61714616	63034152	1025	-0.3779
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	63040518	63045302	2	-3.1763
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	63045798	63300366	193	-0.3841
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	63305880	63306518	2	-2.8706
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	63306896	82838682	12249	-0.3848
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	82838867	85990782	1361	-0.7805
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	85993762	86908290	461	-1.4158
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	86913056	90378488	1654	-0.7931
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	90378721	95241131	33	-0.5099
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	95250178	96497478	616	-0.0419
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	96505106	173931478	42101	0.2309
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	173932440	173932511	2	1.7246
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	3	173932990	199023074	12715	0.2225
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	1043934	47047872	27708	0.2137
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	47049506	47762714	430	-0.4023
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	47763540	56319546	2622	0.2095
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	56320853	56321482	2	-1.2562
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	56323282	61069969	2804	0.2266
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	61076388	63129802	1056	-0.3849
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	63138659	86046216	12181	0.238
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	86051853	114303187	15791	-0.3596
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	114303278	114303635	2	-2.8368
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	4	114304897	189836143	39901	-0.3639
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	967233	28265824	16172	0.2901
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	28266474	28768055	231	0.6313
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	28768336	45414213	9522	0.3116
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	50160613	59344919	5863	-0.3774
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	59345198	59745509	197	-0.7912
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	59816470	82653043	12231	-0.3785
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	82653852	82654559	3	-2.2887
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	82655291	165117665	47002	-0.3671
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	165118750	165121027	2	-3.1109
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	165126387	165677011	401	-0.3855
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	165680464	165686605	7	-2.5299
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	5	165688621	180293075	8649	-0.4006
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	6	959281	56706812	33600	-0.0589
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	6	56707676	62294926	273	-0.372
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	6	62364427	170745844	62504	-0.0382
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	671810	62753785	33380	0.4384
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	62758473	109963681	22610	-0.2278
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	109964760	109964865	2	-1.9607
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	109965784	145557203	18768	-0.2215
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	145557978	145559610	2	-2.05
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	145560280	147563073	1253	-0.2302
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	147565572	147565710	2	-2.1959
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	7	147567496	158077879	5195	-0.2706
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	8	607667	43052529	24720	-0.0692
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	8	47580110	85121609	21355	0.6067
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	8	85122026	85124892	2	2.1083
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	8	85128553	104759769	11096	0.6085
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	8	104760102	104760116	2	-0.8488
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	8	104762861	145297641	24307	0.603
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	8	145304381	145304484	3	0.1311
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	9	779932	33546544	20148	-0.3867
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	9	33546610	34136780	333	-0.0943
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	9	34141280	35234239	554	0.798
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	9	35234632	36580688	677	1.6823
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	9	36588301	37092252	430	-0.8671
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	9	37095345	38559157	930	-0.3915
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	9	38569864	140058573	44798	-0.0704
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	405240	3614116	1680	-0.4191
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	3614672	3615624	3	-2.1021
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	3616121	4817224	1123	-0.4002
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	4817302	4818211	4	-1.7412
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	4819934	12622719	5625	-0.4082
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	12622790	12623318	3	-2.0024
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	12624215	13266835	561	-0.4139
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	13267610	13270956	2	-2.7106
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	13271200	38071963	16610	-0.3904
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	38073555	70292127	14610	-0.0501
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	70296336	70301635	2	-1.9834
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	70301789	91689682	13340	-0.0587
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	91692375	92273879	374	-0.3744
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	92274309	96221159	2195	-0.0478
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	96224863	96329213	36	-1.0475
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	10	96329494	135075077	24515	-0.0683
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	11	446120	127629037	73251	0.1852
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	11	127629301	127686911	48	-0.2653
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	11	127687390	133647740	3909	0.0491
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	12	760163	93925954	52386	0.2092
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	12	93926344	94059904	80	0.6841
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	12	94064339	101192519	4464	0.2069
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	12	101192899	101192963	2	2.0096
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	12	101194585	131671419	16964	0.1747
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	13	18348806	33750603	9447	-0.3833
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	13	33754137	114005560	47136	0.3255
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	14	19571208	20658619	633	-0.0715
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	14	20659451	20659470	2	-1.7128
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	14	20659921	25093498	1803	-0.0671
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	14	25095137	25095418	2	-1.5333
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	14	25100925	51277767	13945	-0.0501
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	14	51286207	51292545	2	1.6765
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	14	51293502	105059083	32996	-0.0618
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	15	21238778	99701830	44506	0.1742
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	16	593460	84583678	39055	0.172
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	16	84583987	84584334	2	-1.1586
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	16	84585885	87907437	1790	0.1482
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	17	933971	7475129	3131	-0.1214
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	17	7475817	7735212	101	-0.8548
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	17	7737408	35710677	12234	-0.0103
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	17	35719873	35804766	46	0.5613
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	17	35807857	78510305	21447	0.1679
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	319586	20888797	10499	0.037
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	20889074	41836890	12719	-0.3698
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	41845877	41847578	2	-2.8149
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	41847868	63746898	13764	-0.3725
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	63747603	64817882	433	-0.7899
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	64819244	73758516	4335	-0.3989
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	73758811	73761543	5	-1.9164
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	18	73762779	75210228	777	-0.4075
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	19	235018	13740939	4901	-0.1245
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	19	13743201	15621577	907	0.7137
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	19	15623938	21421122	2042	-0.1214
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	19	21425301	21478209	24	0.633
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	19	21485103	63570038	16046	-0.1122
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	20	403764	61690281	37262	0.2872
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	14269492	15345886	685	0.2138
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	15346292	15358082	11	-0.3074
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	15362252	19138205	2294	0.2146
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	19142944	19506454	260	0.6076
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	19511311	19902546	301	1.0607
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	19902928	22361015	1675	-0.3785
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	22361145	22361530	2	-2.5213
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	22361953	24336105	778	-0.3632
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	24336568	24358789	22	-0.9029
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	24361331	25394684	762	-0.3561
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	25396983	41231168	10870	-0.0629
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	21	41232567	46503202	2883	-0.4289
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	22	15803930	32196363	7228	0.115
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	22	32196854	32197479	3	1.4254
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	22	32199834	47717016	9680	0.1346
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	3167107	62097269	23680	-0.2615
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	62105299	65332171	1098	-0.8635
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	65332280	65341266	11	-3.2627
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	65341510	68216563	1194	-0.9078
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	68227083	110183856	17112	0.2026
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	110183966	110184482	2	2.5436
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	110187315	125710128	7614	0.2208
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	125710210	125712094	4	-2.7807
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	125713128	142643771	7235	0.2107
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	142644265	142646719	2	4.0701
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_F03_730460	X	142649181	154558783	5310	0.2168
