Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	1	3208470	214993476	109299	8e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	1	214993567	214995713	4	-1.3479
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	1	214996548	245880329	19583	0.0028
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	2	474222	138015058	71677	0.0019
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	2	138015348	138015378	2	-2.1039
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	2	138020776	215470269	43137	-0.0012
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	2	215474851	215476690	2	-3.6701
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	2	215476848	242124735	16269	0.0021
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	3	526235	199023074	106236	1e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	4	1043934	189836143	102575	-5e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	5	967233	180293075	100336	-4e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	6	959281	170745844	96325	-0.0012
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	7	671810	158077879	81193	-5e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	8	607667	145304484	81402	-0.0019
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	9	779932	140058573	67899	1e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	10	405240	96221159	56158	-4e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	10	96224863	96329213	35	-0.7939
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	10	96329494	108522614	7132	0.0028
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	10	108522767	108523348	3	-1.2662
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	10	108524996	114060139	3673	-0.0078
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	10	114061153	114061338	2	-1.2828
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	10	114061885	135075077	13703	0.0036
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	11	446120	81062993	43323	0.0031
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	11	81068167	81069261	2	-2.1117
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	11	81071239	133647740	33796	0.0017
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	12	760163	93926344	52325	-0.0017
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	12	93928789	94059904	79	0.528
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	12	94064339	127876253	20156	-0.0014
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	12	127876762	127884567	2	1.5191
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	12	127886789	131671419	1261	0.0107
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	13	18348806	73860797	31614	-0.0018
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	13	73862118	73863182	2	-2.1396
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	13	73864446	114005560	24923	3e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	14	19571208	105059083	49396	0.0025
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	15	21238778	99701830	44467	1e-04
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	16	593460	87907437	40811	0.0053
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	17	933971	78510305	36931	0.0053
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	18	319586	75210228	42593	-0.0013
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	19	235018	63570038	23922	0.0087
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	20	403764	61690281	37209	0.004
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	21	14269492	46503202	20561	-0.0018
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	22	15803930	47717016	16905	0.008
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	X	3167107	38133957	15488	0.0117
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	X	38134330	38135724	3	-3.2538
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	X	38136467	49030917	5000	0.0224
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	X	49031058	49031069	2	-4.4706
BALMS_p_TCGAb54and67_SNP_N_GenomeWideSNP_6_G08_730512	X	49031384	154558783	42890	0.009
