Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	3218610	30549915	14140	-0.4572
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	30553542	33812938	1569	0.7344
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	33819814	34922948	846	-0.4877
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	34926877	49514851	7906	0.7303
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	49523724	68380116	12354	0.3719
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	68382863	80946899	7054	0.6843
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	80947316	99732202	11637	0.1936
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	99732737	111800472	6635	-0.4529
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	111810174	111827679	25	0.1533
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	111827711	114140448	1503	-0.4241
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	114146906	115986104	1153	0.2122
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	115990063	116011300	16	0.7042
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	116011901	157584094	6481	0.2192
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	157584301	170660016	9264	-0.4212
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	170662069	170695232	13	-1.5281
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	170698519	182611606	7282	-0.0655
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	182612327	182613638	2	-1.4654
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	182613666	214361741	19628	-0.0839
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	214364219	214364640	2	-1.6283
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	214366817	220001763	3951	-0.1003
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	220005586	228368230	4875	0.4022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	228370747	228372062	3	-1.0039
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	228372410	238855281	7306	0.3981
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	238855638	238856094	3	-0.7163
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	238862449	243819980	3393	0.3526
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	243827322	243834193	10	-0.1615
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	1	243842932	247813706	1852	0.3484
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	484222	13166369	8015	-0.0968
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	13174202	15523266	1403	0.1359
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	15530419	15935838	283	0.4125
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	15938544	31174948	9175	0.1785
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	31176516	56988632	14223	-0.1
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	56995224	73048661	9387	0.1487
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	73048938	73849184	350	0.5589
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	73934166	104725065	11917	0.2031
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	104725247	110458410	3395	-0.4658
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	110458936	184739734	40595	0.18
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	184744961	184750724	6	-0.4762
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	184756154	194494894	4451	0.1661
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	194505663	194553561	21	-0.5355
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	194569722	209728797	8177	0.191
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	209731844	218296003	5272	-0.4602
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	218296141	218296484	2	-2.6772
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	2	218297262	242476062	14442	-0.4418
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	2212571	3545905	757	-1.004
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	3547546	11923392	4937	-0.0399
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	11924678	11925383	2	-1.8849
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	11925610	15545475	2383	-0.0463
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	15547310	16727277	823	-0.9745
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	16727334	16740524	6	-3.5128
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	16742111	24935447	4230	-0.9682
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	24935974	98661092	40170	0.0283
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	98661270	98704840	26	-0.5315
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	98709463	104276827	2986	0.087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	104278582	104288542	3	-0.8598
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	104289715	105634842	838	0.0825
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	105638229	111104909	2956	0.4772
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	111109853	113549351	1510	0.8139
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	113552722	114066440	244	1.0493
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	114068889	114249019	117	0.7884
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	114256693	114352959	71	0.4333
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	114353140	127420353	7843	0.7952
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	127423775	127424210	4	-0.0284
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	127424825	130716487	1643	0.8103
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	130720709	182557836	27082	0.4716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	182557989	182558015	2	-1.1174
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	182561709	184953220	817	0.4648
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	184953662	196014073	6537	0.1196
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	196016146	196064448	14	0.5679
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	3	196066651	197538677	276	0.1483
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	1053934	2647131	538	0.2043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	2649547	38903412	22889	-0.4694
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	38904436	39132380	155	0.1973
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	39135601	39328705	102	-0.4522
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	39394753	47567654	4118	0.1652
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	47568964	48068783	282	0.6019
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	48068826	53633761	500	0.17
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	53642124	53643936	3	-0.5133
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	53645920	53665989	10	0.2657
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	53666409	82933126	16416	-0.4655
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	82933477	82933886	2	-2.1416
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	82936189	83623978	402	-0.4318
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	83626025	83626674	2	-3.305
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	83629534	110996960	15309	-0.449
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	111003987	133189144	12026	0.5934
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	133198332	133198641	2	-0.8265
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	133199152	135722369	1067	0.541
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	135724062	136478530	354	0.8463
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	136480183	148412412	6919	0.5963
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	148414466	164384855	9093	-0.4531
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	164387398	177026135	6673	0.5858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	177029780	177030550	2	-0.6129
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	4	177030592	188763651	5737	0.561
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	914233	17848822	10866	0.1585
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	17851693	17896933	36	-0.5503
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	17898389	52753133	16610	0.1525
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	52757775	60843924	5014	-0.4523
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	60847019	60853048	13	0.1653
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	60853523	96532638	18930	-0.4557
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	96533469	122456849	13827	-0.0959
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	122461778	170120932	29562	-0.442
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	170122062	171060118	521	0.2437
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	5	171063573	180360469	4879	-0.4444
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	1014281	5720839	3283	-0.5066
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	5723181	10369675	3503	0.1307
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	10374737	23420966	9008	0.6941
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	23421034	28924530	2654	0.931
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	28946920	36929007	2879	0.6934
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	36931994	36981408	66	0.9513
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	36982947	52791760	9774	0.6037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	52792854	52793864	4	-0.4019
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	52798062	54531961	1217	0.5694
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	54542866	66472665	3534	0.1101
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	66475600	66481893	4	-0.8561
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	66482647	70141571	2148	0.0818
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	70149333	74603719	2601	-0.5346
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	74605806	90007636	8530	0.0115
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	90008700	90009199	3	-0.9884
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	90011510	114138706	13795	-0.0138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	114145603	114145907	2	-1.4134
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	114147811	120769450	3335	0.0259
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	120771047	120781609	11	-0.4734
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	120786627	126986996	3538	0.1213
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	126987536	126991844	5	0.9267
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	127002633	129925541	1767	0.137
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	129932894	130751454	585	-2.1896
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	130753316	130949649	139	0.1491
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	130953431	151835238	13073	-0.4561
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	151835930	153826150	1498	0.1814
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	153826844	153827309	2	-1.0084
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	6	153829448	170903919	9432	0.1736
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	705284	16641261	8074	0.1595
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	16642838	16642854	2	-1.8783
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	16642995	20643810	1737	0.1536
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	20644340	23341742	1953	-0.4754
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	23347614	28443938	3531	0.1795
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	28444107	28460575	17	0.612
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	28464221	55846514	17668	0.1783
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	55848150	55865183	10	0.7152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	55865767	125719132	31063	0.1854
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	125719450	125719456	2	-1.0213
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	125721818	127618600	1086	0.1827
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	127620097	128433630	311	0.6174
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	128437497	140424286	6819	0.2
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	140432639	140488256	62	-0.351
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	140495446	148059842	3874	0.1738
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	148059855	148080463	11	0.6469
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	148081736	152671399	2096	0.2156
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	152674805	152881364	177	-0.5187
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	152886220	152905026	15	-1.7779
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	7	152913232	158385118	2767	-0.5076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	617667	95896205	51974	0.1586
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	95909498	100913221	2946	-0.4562
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	100916437	102522933	994	0.2086
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	102526560	104690926	1280	0.5642
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	104690940	104706451	9	1.1679
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	104708445	108077599	1675	0.5346
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	108080075	108080619	3	-0.5977
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	108081817	119105288	6084	0.5121
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	119106046	125448760	4214	0.8079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	125453045	125459719	6	-2.2891
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	125460073	125654384	125	0.8069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	125654714	125658902	4	-0.3671
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	125659486	128442469	1997	0.7906
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	128447549	128452766	2	-0.4733
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	8	128453765	145232496	10192	0.7961
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	9	789932	30279182	18147	-0.475
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	9	30279337	30280020	3	-2.6914
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	9	30286206	89290750	17704	-0.4546
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	9	89292349	89297145	2	-3.3099
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	9	89298519	135801500	29845	-0.4509
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	9	135807365	135815269	28	0.2364
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	9	135818127	140938752	1971	-0.4936
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	415240	55884789	31902	0.0204
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	55887933	59066838	1400	-0.5839
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	59070365	59071887	2	-2.3466
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	59072787	60542255	998	-0.56
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	60546705	65774751	3502	0.0662
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	65775981	69841473	2075	0.4156
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	69841526	76022474	3572	0.1716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	76031609	76033154	7	-0.7628
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	76040380	80351823	2988	0.1667
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	80352495	80353927	3	-0.8365
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	80354355	109432616	17666	0.1465
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	109441620	127170394	12153	-0.5567
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	127176595	129748278	1921	0.0967
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	129751331	135221772	2557	0.5483
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	10	135224372	135225087	2	0.0496
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	456120	27451777	17338	-0.4743
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	27458409	28017166	335	0.1821
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	28017604	29702047	927	-0.4765
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	29706073	30597838	549	1.1146
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	30599199	31048683	319	1.7119
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	31056949	31738582	319	1.138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	31740641	33629951	1147	0.6312
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	33630792	33630891	2	1.9451
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	33631111	38567267	3064	0.6149
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	38567435	38814308	137	0.1767
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	38821463	38824176	3	0.6049
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	38824497	43535401	3097	0.1435
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	43536713	43538233	3	-0.7613
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	43538536	45613439	1505	0.2197
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	45620673	45640697	11	0.7116
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	45640918	78436131	12318	0.2021
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	78441119	95065302	10136	0.5645
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	95067160	95077889	19	1.1487
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	95078042	100807521	3761	0.5358
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	100808248	101979409	984	0.831
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	101984628	104119650	1168	0.5705
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	104168774	106506140	1354	0.1046
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	106506599	106507197	2	-1.1997
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	11	106511123	134142530	18632	0.1703
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	889902	12774082	6518	0.2182
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	12782901	18956417	3729	-0.4797
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	18958634	18959343	2	-2.4574
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	18959683	23727824	2965	-0.4723
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	23727848	23727852	2	-2.1146
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	23728161	33521107	6312	-0.4757
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	39223566	39405462	81	0.138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	39408906	39525149	60	-0.1713
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	39535140	95670459	32856	0.0987
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	95678439	96651259	652	0.4449
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	96651953	102635521	3727	0.1856
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	102653911	110353892	5014	-0.0788
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	110355702	110358336	3	-1.424
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	12	110358750	133161346	11930	-0.0872
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	19450806	27550975	4380	-0.4527
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	27551703	27555686	4	-2.6496
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	27555834	55731925	17178	-0.4587
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	55735072	69200534	6317	0.1506
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	69201245	69235658	38	-0.4612
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	69271492	79989099	6954	0.1877
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	79992255	95324682	8996	-0.5678
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	95325200	95326105	2	-2.4542
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	13	95326452	114987458	12606	-0.5466
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	14	20501368	67640666	25958	0.1729
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	14	67641501	67980347	184	0.5617
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	14	67983216	69168911	723	0.1638
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	14	69172166	69357175	108	0.56
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	14	69357265	103620331	21646	0.1726
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	14	103626006	103633103	12	0.7829
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	14	103636907	105988038	789	0.256
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	23687685	52531452	14759	-0.4538
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	52531877	52535718	2	-2.4203
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	52537395	58801390	4100	-0.4477
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	58801426	58801541	2	-2.1717
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	58802528	62117789	2536	-0.4551
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	62118475	68574454	3852	0.1903
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	68574578	70648426	1368	-0.4806
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	70655269	76483342	3065	0.2234
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	76484830	76485536	3	-0.8726
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	76485966	100745310	14160	0.2119
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	15	100745680	101884307	582	0.6197
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	653459	1235314	97	-0.5194
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	1349209	1349929	2	-1.9958
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	1350198	2026442	257	-0.4733
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	2032055	2063826	10	0.364
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	2070931	31850299	13449	-0.4373
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	46507665	70635895	14805	0.1685
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	70637616	79255074	5507	-0.4557
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	79281581	80336716	1074	0.18
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	80337633	88037328	5247	-0.4886
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	88039150	88051561	4	-2.1984
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	16	88052161	89379936	174	-0.5299
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	987221	5419749	1910	0.7006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	5424042	13674173	5165	-0.4719
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	13674922	13684167	18	-2.666
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	13692070	34350341	6589	-0.4593
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	34352191	36991976	1090	0.3328
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	36992104	37010150	8	0.8743
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	37019485	50166730	5733	0.4949
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	50169172	63788615	7591	-0.1892
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	63788684	71704579	5307	0.3884
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	71705227	71722357	21	1.1548
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	71725247	78047988	2399	0.3765
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	78054102	78054244	2	1.4735
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	78054389	80569483	861	0.3701
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	80571060	80571695	5	-0.2272
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	17	80571933	80917016	184	0.3761
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	329586	19494756	8529	0.2106
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	19495668	19528443	21	0.6669
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	19535131	34871434	9424	0.187
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	34872204	34877305	8	-0.4473
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	34878206	41885680	4094	0.1647
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	41886364	54436073	8127	-0.4568
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	54449325	54680838	134	-1.7718
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	54681153	66928759	7288	-0.3932
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	18	66938442	77109240	4960	0.2806
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	19	284018	7142244	1900	-0.4341
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	19	7142843	7163065	11	-1.2073
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	19	7163154	24052992	6989	-0.4247
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	19	28240494	58703981	14855	0.1334
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	19	58707016	58878226	100	-0.5543
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	20	455764	21092988	13817	-0.4562
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	20	21098277	30660935	3325	0.1368
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	20	30661919	30682771	17	0.6064
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	20	30682951	49715775	11490	0.1475
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	20	49716117	62219837	8540	0.5583
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	21	15347621	32024403	10661	0.1379
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	21	32028043	32030329	4	-0.7405
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	21	32030515	42230646	6960	0.1713
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	21	42233842	47678774	2937	-0.492
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	22	17423930	26684958	2339	0.2123
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	22	26688838	26691193	8	-0.5089
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	22	26692186	47741458	13267	0.2098
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	22	47749241	47752111	2	-2.5797
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	22	47752282	49331012	1296	0.2096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	3157107	25085125	9376	0.4818
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	25085343	25107830	8	-0.2809
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	25108739	45369160	9592	0.4559
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	45369779	93712419	17122	-0.1808
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	93717011	95625808	252	0.3953
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	95627703	116960518	10184	-0.2048
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	116960816	116983614	15	0.554
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A05_755822	X	116984064	154905589	17167	-0.2151
