Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	1	3208470	113153707	63313	0.0079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	1	113157433	113161960	5	-1.0184
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	1	113169821	177778116	22570	0.008
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	1	177783763	177784483	5	-1.1724
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	1	177784580	242333440	41628	3e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	1	242335457	242335489	2	-1.322
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	1	242337137	245880329	1549	0.0135
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	2	474222	108605839	57596	0.0021
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	2	108610376	108610389	2	-2.4605
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	2	108614717	184303643	41159	-6e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	2	184303984	184304012	2	-1.3858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	2	184304215	242124735	32529	0.0068
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	3	526235	137434802	74915	0.0038
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	3	137437810	137440023	6	-0.8402
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	3	137443939	141177333	1809	0.0021
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	3	141178425	141179014	5	-0.8087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	3	141180505	199023074	29637	0.0044
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	4	1043934	76533317	41098	-0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	4	76537421	76544177	9	-0.7088
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	4	76555161	116191296	22713	0.0123
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	4	116191330	116194097	2	-1.4232
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	4	116194129	189836143	38918	-0.0057
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	5	967233	86202641	46127	-0.0051
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	5	86202928	86202961	2	-1.93
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	5	86203007	168793809	47965	6e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	5	168796010	168796588	3	-1.1425
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	5	168797878	180293075	6400	0.0057
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	6	959281	52899719	31174	0.0026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	6	52900813	52901823	4	-1.4384
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	6	52906021	133523562	42915	0.0011
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	6	133524855	133525212	2	-1.1595
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	6	133525714	170745844	22371	0.0063
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	7	671810	15083282	7074	0.0058
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	7	15084220	15099652	16	0.4585
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	7	15129498	106043538	46779	1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	7	106044259	106044322	2	-1.4203
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	7	106044422	158077879	27447	-0.004
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	8	607667	125653656	69282	6e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	8	125653726	125654121	2	-1.9297
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	8	125662775	130233037	3236	0.0137
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	8	130239799	130298611	44	0.4875
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	8	130300494	145304484	8969	-0.0193
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	9	779932	2471651	1071	0.0123
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	9	2471683	2473527	2	0.9445
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	9	2473942	9214800	4145	0.0152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	9	9215463	9215919	2	-1.4792
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	9	9221961	140058573	62774	0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	10	405240	15224056	10688	-0.0068
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	10	15225509	15228768	2	-1.2799
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	10	15229313	135075077	70178	4e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	11	446120	106261564	58745	-1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	11	106269385	106877859	385	0.4182
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	11	106882220	133647740	18107	-0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	12	760163	120020328	68655	0.0055
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	12	120021765	120022141	4	-1.0906
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	12	120022886	131671419	5282	-0.0186
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	13	18348806	114005560	56643	-0.0045
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	14	19571208	105059083	49439	0.0034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	15	21238778	99701830	44522	0.0035
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	16	593460	5699270	2033	0.0131
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	16	5699756	5699939	2	-1.3418
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	16	5700407	58479106	20638	-0.0027
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	16	58479290	58479621	2	-1.3313
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	16	58487027	70532208	6624	-0.0167
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	16	70533289	70541999	8	-0.6927
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	16	70544447	87907437	11545	-0.0058
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	17	933971	78510305	36977	0.005
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	18	319586	75210228	42657	-0.0012
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	19	235018	17809732	6851	0.0083
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	19	17815215	17818024	2	-1.5753
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	19	17818309	63570038	17094	0.0014
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	403764	52277317	30910	0.0055
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	52277689	52278805	2	-1.484
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	52279149	53034424	588	0.0024
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	53037236	53037760	2	-1.5509
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	53040377	53807829	585	-0.0337
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	53808230	53808261	2	-1.2883
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	53808304	59924051	4558	-0.0239
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	59924293	59924309	2	-1.477
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	20	59926031	61690281	627	-0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	21	14269492	46503202	20586	2e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	22	15803930	47717016	16922	-0.0028
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	X	3167107	6393430	734	0.0074
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	X	6397288	6397294	2	-1.7294
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A06_755916	X	6397495	154558783	63048	0.001
