Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	61735	564621	32	-0.3054
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	603590	72750353	43002	-0.0042
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	72756113	72763370	9	-0.8846
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	72768418	72811148	48	1.298
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	72811904	104163787	20101	-7e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	104178038	104239689	13	0.6096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	104239986	106019236	934	0.0248
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	106019310	106022375	15	0.8392
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	106024055	112690326	4646	-0.0168
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	112695965	112697376	24	-0.466
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	112697390	152555527	8042	-0.0268
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	152555706	152586594	35	0.8037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	152590494	152762656	182	-0.0238
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	152762667	152767467	9	0.5162
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	152767482	152827652	56	0.0065
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	152828434	152833871	2	-1.1846
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	152836297	153710956	599	-0.0084
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	153717058	153718746	4	-0.9974
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	153725210	161508875	4634	-0.0326
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	161517939	161656369	55	-0.4379
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	161656498	196732086	24235	-0.0027
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	196738623	196816730	93	-0.3869
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	196823317	222366668	17442	-0.0031
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	222374834	222377004	2	-2.7999
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	222382134	248162639	18039	0.0063
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	248162950	248171576	4	-1.0113
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	1	248173453	249224388	472	0.0518
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	12784	3168719	2201	0.0488
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	3170534	3187839	21	-0.4183
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	3187925	34691069	21895	0.0148
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	34699315	34727867	44	-0.4628
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	34736513	35967385	877	0.0027
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	35968036	35987916	8	-0.9083
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	35987947	48780414	9317	0.0016
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	48785471	48850005	48	-0.8396
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	48851152	49846209	713	0.0246
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	49848288	49849089	3	-0.9529
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	49849103	52743925	2080	0.0428
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	52754468	52781295	32	0.5173
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	52781326	85332445	20992	0.009
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	85332460	85333406	2	-1.3586
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	85333976	86937687	962	-0.0455
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	86953070	86953854	2	1.4896
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	86970406	87128201	64	-0.0115
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	87129203	87161853	3	-1.5969
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	87172727	89966824	881	-0.0013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	89972681	89995037	3	1.2218
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	89999062	112142905	9439	0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	112143413	112152850	4	-0.8848
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	112153109	117749164	3251	0.0057
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	117751005	117751354	2	-1.2594
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	117751405	130793856	8449	0.0262
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	130793883	130874488	16	-0.4492
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	130874876	132242452	452	0.0047
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	132242738	132243941	2	-1.934
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	132250966	137133165	2970	0.0181
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	137136958	137137242	2	-1.4005
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	137138831	138488100	1005	0.0117
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	138489527	138495247	2	-1.2725
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	138495892	146862085	5158	0.0118
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	146864404	146878410	27	0.848
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	146878442	147934790	526	0.0191
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	147941342	147946346	3	-1.1657
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	147946882	164636852	10069	0.0043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	164643488	164645126	5	-1.0044
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	164646642	225941315	37850	0.0022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	225942595	225942950	2	-1.2657
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	2	225943163	243089456	10716	0.0061
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	60345	6646543	5847	0.0569
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	6651128	6653244	22	-0.8164
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	6653332	37977417	21829	0.0118
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	37982108	37986928	18	-3.4114
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	37987106	68746259	20157	0.0069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	68746284	68747413	13	-1.2138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	68748758	128399221	34118	0.0093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	128405171	128412331	7	1.014
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	128414161	162508268	20977	0.0122
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	162512657	162524858	12	0.7448
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	162528630	162532950	4	-0.2511
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	162534730	162540490	6	-1.0716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	162545716	162625995	48	0.4952
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	162626572	190770502	17716	0.0026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	190785752	190789312	8	-0.742
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	190789726	192882757	1494	0.0433
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	192882772	192882903	4	1.9681
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	3	192886435	197896118	2708	-0.0089
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	12281	69713	62	-0.2984
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	71420	4110230	1642	9e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	4113921	4122828	4	-1.0895
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	4134946	6401198	1867	0.0275
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	6401551	6410746	13	-0.4642
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	6411705	9456977	1665	0.0469
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	9461230	9478849	6	1.7047
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	9479035	10210390	549	0.0619
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	10223416	10229276	12	0.767
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	10229292	10236142	24	0.3528
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	10238436	10392354	171	0.0223
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	10393154	10400668	15	-0.6039
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	10402718	26288818	11559	0.0243
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	26291985	26295174	4	-1.152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	26299125	34779054	5252	0.0134
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	34786500	34824725	38	0.7057
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	34829872	64705785	16619	0.0125
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	64707581	64717026	10	0.6121
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	64718043	69261064	2862	0.0174
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	69282205	69288142	5	-1.0016
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	69294799	69372003	16	-0.0415
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	69374941	69505115	67	0.4453
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	69506334	115173700	27755	0.0078
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	115175323	115182175	23	-1.7551
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	115184229	122281973	4351	0.0094
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	122282468	122291131	29	-0.6239
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	122291522	161880124	23680	0.0153
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	161880141	161884908	19	-0.4775
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	161884919	162477082	438	0.0216
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	162477184	162480449	2	-1.3491
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	162480911	172987857	6645	0.0193
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	172987928	172989533	13	0.5924
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	172995979	179392356	3899	0.0155
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	179392363	179396181	3	-1.1164
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	4	179396484	191027923	8234	0.0396
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	15532	685748	307	0.0357
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	698371	800686	35	0.451
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	800839	12815865	9887	0.037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	12819313	12838533	12	0.5993
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	12849201	57321646	25667	0.0156
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	57326027	57338357	33	-0.549
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	57340073	140231549	50142	0.0068
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	140231565	140231839	6	-0.9961
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	140241027	175387546	24336	0.0174
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	175387859	175564034	25	-0.4194
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	175564134	178109975	1170	-0.016
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	178112261	178113163	2	-1.7476
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	5	178118855	180790320	1550	-0.0054
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	149661	16899778	13267	0.0062
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	16900324	16900413	2	-1.4991
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	16900540	25682591	6361	0.0119
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	25683280	25686871	2	-1.1755
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	25687539	29837188	2121	-0.0705
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	29837314	29874808	22	0.6223
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	29876959	32431292	1178	-0.1227
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	32431552	32574381	43	1.2719
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	32578082	33937999	840	-0.0463
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	33938743	33942705	7	-1.003
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	33944586	53931151	12937	-0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	53931230	53931855	6	-1.3593
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	53935348	67008286	5466	0.0193
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	67009023	67048629	55	-0.6722
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	67049406	95560154	18538	0.0134
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	95566986	95643907	48	-0.8129
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	95649039	96876111	633	0.0103
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	96877186	96884579	2	-1.1716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	96884886	98135758	725	0.0171
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	98136040	98136265	3	-1.2138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	98140685	139601031	26283	7e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	139605327	139605757	2	-1.5942
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	139608603	153640890	9287	-0.0026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	153647708	153656875	9	-0.954
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	6	153662425	171051005	12168	0.0236
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	43355	15431632	10423	0.0046
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	15431670	15433289	2	-1.8997
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	15434065	54386505	28167	0.0114
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	54386509	54386517	5	-1.7581
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	54393488	97385970	22167	0.0197
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	97395460	97402227	14	-0.7006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	97402288	102349185	2076	-0.0034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	102351847	102358341	14	-0.501
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	102358404	109429927	4540	-0.0108
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	109430050	109453910	40	0.3223
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	109453982	126045556	10042	0.0099
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	126045651	126046615	10	-1.1698
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	126046876	142474939	10434	-3e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	142476719	142486345	29	0.6779
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	142486495	143873377	834	-0.0033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	143873952	144066947	45	-0.7392
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	144074929	153147638	5584	0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	153147645	153147712	2	-2.2821
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	153147715	154389895	864	0.0609
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	154393171	154399613	4	-1.6265
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	7	154400830	159127004	3245	0.0512
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	31254	593041	327	0.0903
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	594944	595908	10	-0.5353
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	601043	4002192	3454	0.0587
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	4002207	4002316	3	-1.284
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	4002653	12198254	7518	0.0302
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	12216009	12234400	10	-1.3869
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	12239835	112291494	61729	0.0176
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	112294279	112295245	9	-1.3713
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	112295260	138823734	18699	0.0105
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	138824637	138825024	3	-0.8765
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	8	138825770	146298155	4247	0.0151
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	46587	10403105	9992	0.0101
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	10404138	10404986	2	1.5563
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	10407943	25668205	12166	0.0178
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	25668442	25672341	3	-1.4018
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	25675730	28044704	1870	0.0279
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	28047588	28050691	5	-0.9419
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	28055603	68183981	7650	0.0075
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	68186051	68186057	4	1.8069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	9	68186059	141091394	48275	0.0104
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	10	72759	17880968	14887	0.0013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	10	17889821	17949857	5	-1.5451
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	10	17971816	24377674	4361	0.0059
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	10	24377675	24378054	10	-2.2693
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	10	24378908	135506704	71867	0.0114
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	198510	15875139	10774	-0.0079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	15875437	15879949	3	-1.1821
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	15880212	18940093	1979	0.0189
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	18940322	18961922	58	0.6072
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	18961935	48598422	20625	0.015
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	48601434	48602676	2	-1.775
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	48606318	60965476	4693	0.0188
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	60984460	61000494	2	-2.124
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	61015806	79967513	9890	-0.014
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	79967548	79967564	2	-2.7319
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	11	79967686	134944770	39130	0.0175
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	150442	9630556	6207	-0.0021
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	9633870	9715565	24	0.8737
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	9728292	11222710	1049	-0.0648
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	11224689	11241532	8	0.5043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	11251874	11512492	135	-0.068
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	11512531	11552192	30	-0.7041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	11552602	33294660	15432	-0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	33301406	33307078	26	-0.6297
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	33307374	125234313	55686	-0.0032
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	125234637	125242950	6	-0.3534
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	125242962	125603217	241	0.0487
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	125605887	125617917	7	-0.5992
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	125625570	131149268	4887	0.0571
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	131149308	131149534	2	-1.5098
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	12	131149574	133778189	1364	0.0133
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	13	19026949	23629187	2895	0.0221
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	13	23629210	23633515	13	-0.5218
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	13	23638195	38071135	10658	0.0094
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	13	38072036	38084757	16	-0.4838
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	13	38088330	115108397	50756	0.0115
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	19002124	19453326	35	0.0814
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	19462483	20423372	155	-0.3343
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	20424926	38799520	11888	0.0063
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	38799620	38800374	7	-1.0917
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	38804256	70316465	19776	-7e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	70318637	70320863	2	-1.8984
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	70320991	74001123	2480	0.0026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	74006707	74020979	8	0.6271
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	74029900	106874361	20980	-8e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	106879831	106918108	51	-0.4536
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	14	106918649	107285437	224	0.0413
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	20016328	20468564	71	-0.0178
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	20472851	22334162	253	0.2425
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	22338955	22341689	3	-1.0117
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	22350922	23899632	590	0.0302
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	23902324	23902647	2	-1.5496
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	23902903	28561110	3313	0.0415
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	28604613	28706002	4	-1.4642
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	28709292	30502234	882	0.0198
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	30502279	30920624	96	-0.5362
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	15	30925605	102469040	46864	-0.0062
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	60777	5607890	2626	-0.0163
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	5608089	5608151	2	-1.6087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	5608337	11603872	6065	0.0466
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	11608244	11629933	9	-0.5554
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	11629948	16628062	3097	-0.0038
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	16633361	16690800	15	0.4313
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	16696401	18286515	995	-0.0175
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	18305985	18779448	37	0.3191
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	18779778	32013278	7231	-0.0051
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	32024412	32253233	36	0.2905
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	32253248	32654953	79	0.5921
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	32654970	33631830	146	0.2769
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	16	33643399	90287535	32100	0.0183
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	17	526	4540647	2444	-0.0326
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	17	4544331	4544551	3	-1.1718
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	17	4547179	44165803	21065	-0.0147
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	17	44166270	44441482	133	-0.3892
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	17	44456008	81049726	21659	-0.0193
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	18	11543	63700274	40375	0.0244
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	18	63703904	63757267	66	-0.6887
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	18	63761919	64959323	780	0.0081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	18	64959372	64967265	18	-0.6777
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	18	64967718	78015057	9597	0.0272
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	19	90910	20594676	8972	-0.0382
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	19	20596206	20721462	73	-0.7312
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	19	20723845	59097854	20299	-0.0241
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	20	61305	1560999	1207	-0.0267
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	20	1561580	1593893	41	0.9893
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	20	1597946	23399544	17009	0.0177
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	20	23402774	23569250	151	0.5374
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	20	23576754	26305579	1656	0.0239
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	20	29420352	29569895	40	-0.2216
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	20	29573833	62956153	22399	0.0042
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	21	10736871	28280513	10030	0.02
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	21	28282660	28282852	3	-1.4578
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	21	28283604	37557225	6716	-0.0113
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	21	37557607	37557808	3	-1.666
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	21	37557851	44968053	5901	0.0081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	21	44970873	44972812	2	-2.89
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	21	44973667	48096957	1764	-0.0234
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	16052528	18673357	1216	0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	18732919	18770527	5	0.765
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	18781546	22468619	2079	-0.0887
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	22473918	22474613	6	-2.6091
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	22481498	27889141	4439	-0.026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	27889710	27893497	6	-0.8089
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	27893988	44000711	10364	-0.0173
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	44001846	44007357	5	-1.878
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	22	44007773	51234455	5445	-7e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	168477	55701259	32341	0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	55702659	55707556	3	-1.4993
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	55707686	115133681	28489	0.0091
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	115137955	115150638	7	-1.238
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	115156419	127592641	7449	0.0147
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	127595793	127624833	14	-0.8015
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	127627552	153421849	15681	0.0122
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	153437583	153505460	2	-1.4772
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	X	153524304	155182354	650	-0.0263
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	Y	2650438	6388265	991	-1.0391
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	Y	6400205	6417027	7	0.1501
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A09_755848	Y	6422525	59018259	7637	-1.053
