Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	51598	62639	8	0.1234
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	72033	88451	8	0.4796
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	88465	1500664	210	0.0356
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	1617778	1662463	17	-0.7944
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	1677447	16884097	8534	0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	16884147	16921066	33	0.3341
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	16929044	17055024	23	-0.1648
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	17062591	17134834	63	0.4228
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	17148828	25455878	5272	0.0152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	25455928	25519331	27	0.3455
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	25519533	72535958	28787	0.0096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	72541006	72584492	49	-1.1592
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	72585028	103958859	20106	0.0096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	103959832	104069745	30	-0.9487
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	104104926	107455743	2022	0.0105
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	107457125	107465018	11	-0.8565
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	107466956	110029038	1575	0.0168
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	110034497	110041701	17	-0.9994
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	110044476	147291432	8367	0.0168
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	147303148	147496432	108	-0.5207
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	147496467	150822151	1552	0.0102
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	150822330	150852862	31	-1.8188
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	150852902	157133197	3837	0.011
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	157135125	157136383	2	1.5026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	157141442	177597151	14353	0.005
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	177598005	177599938	3	-1.1895
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	177605829	189087128	7673	0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	189092159	189099594	6	-0.6034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	189103128	194981496	3908	0.0033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	194994473	195068625	92	0.2318
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	1	195068695	247191011	35978	0.0081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	2	2784	4183562	2991	-0.0013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	2	4191739	4201894	42	-0.5215
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	2	4207937	242738129	147098	0.0046
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	35345	199602	157	-0.0106
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	205022	207800	4	-3.2269
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	209877	63103273	43454	0.0047
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	63104291	63110809	6	-0.9341
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	63117231	68828854	4262	0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	68828949	68830103	14	-1.1577
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	68831448	75643831	4939	0.0101
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	75651239	75691329	10	0.5986
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	75695864	89469791	7718	-0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	89477282	89498617	41	-0.7097
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	89498906	131245549	22049	0.0121
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	131246388	131288926	52	0.3465
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	131289614	163606060	20028	0.0092
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	163620294	163625399	14	-0.7799
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	163626942	164015644	276	0.0072
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	164017424	164023184	6	1.0515
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	164028410	176563305	7716	0.0061
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	176563441	176563920	4	-1.1214
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	176564019	190630440	8845	0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	190633467	190645065	11	-1.0203
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	190648702	190827550	155	0.0412
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	190827808	190843448	13	0.2924
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	190846372	190847332	11	-0.7636
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	190853682	193395564	1790	-0.0028
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	193395770	193397502	2	-2.1651
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	193400062	194360596	707	0.0065
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	194360656	194365597	19	-0.6931
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	3	194369129	199380515	2707	-0.0076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	2281	9819488	5806	0.006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	9832514	9844366	35	-1.249
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	9845240	34462895	17003	0.0031
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	34463350	34501120	37	0.5302
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	34506267	63350429	16039	0.0048
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	63352531	63354257	8	-0.6643
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	63362225	64376535	556	0.0176
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	64380064	64390853	29	0.334
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	64399026	70165935	3282	-1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	70166711	70266388	48	-0.4829
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	70266611	138401883	40758	0.0036
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	138401931	138410334	49	-0.7292
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	138411420	146714805	5185	0.0032
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	146721206	146721342	2	-1.3071
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	146725178	162093450	9459	0.0042
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	162099468	162104050	20	-2.2624
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	162104358	173225799	7092	-0.0022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	173225875	173226080	7	0.8124
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	4	173226094	191261904	12137	0.0019
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	5	68532	101283816	61372	0.0022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	5	101288672	101290873	5	-1.1663
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	5	101292227	180722926	51802	0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	94661	9309486	7418	0.0134
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	9310603	9320213	3	-1.7241
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	9365143	29945051	14341	0.0145
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	29945166	29957246	16	-0.9374
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	29958175	32626747	1214	0.0409
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	32635262	32638276	3	-1.3246
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	32644376	32732282	36	0.0494
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	32732569	32733915	4	-1.0459
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	32734596	34045977	813	0.037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	34046721	34050683	7	-0.9389
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	34052564	73275412	22617	0.0093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	73278562	73278784	2	-2.2791
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	73284516	74648586	849	0.0034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	74648953	74654069	9	0.9479
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	74658138	77492878	1771	0.0122
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	77493251	77525185	25	-0.4691
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	77525307	103841338	16580	0.0034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	103841496	103868754	50	0.454
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	103872163	134307961	19093	0.0081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	134310764	134311325	2	-2.146
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	134313765	147447317	8444	0.0073
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	147449819	147450332	2	-1.2194
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	147450673	153999063	4753	0.0048
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	154002479	154003112	2	-1.1427
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	154003592	160952555	4691	0.0055
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	160952709	160953273	5	0.8343
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	6	160988032	170892930	7269	0
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	52911	64206287	41746	0.0044
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	64231500	64288784	10	-0.9248
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	64289075	70058374	3150	-0.0034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	70061186	70064077	2	-2.222
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	70066179	97447355	15986	0.0045
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	97449277	97449984	3	-1.7804
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	97451707	125832210	16604	0.0088
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	125832718	125833851	12	1.2152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	125834112	136130876	6600	0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	136134010	136153874	11	-0.92
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	136157739	143608325	4714	0.0138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	143623463	143640497	7	0.7495
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	7	143645122	158819765	9716	0.0066
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	21254	2068619	1489	0.0056
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	2068658	2068760	2	-1.4065
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	2068779	2689341	631	0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	2690940	2691306	7	0.6441
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	2694578	3989600	1662	0.0022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	3989615	3989724	3	-1.3462
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	3990061	6827707	3944	-0.0012
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	6846225	6846816	2	-2.192
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	6847072	7237790	120	0.0105
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	7241701	7869055	153	-0.3207
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	7869464	11986960	3290	0.0123
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	12025135	12225652	11	-0.4823
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	12233614	12291857	44	-0.0429
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	12305298	12356009	20	-0.4741
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	12366268	23458253	9333	0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	23463685	23463756	4	-0.9558
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	23463816	38407620	9696	0.0028
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	38409516	38409651	2	-1.2624
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	38409666	39349816	511	1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	39354760	39506122	59	0.6224
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	39507456	39949857	268	0.0242
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	39950114	39950804	3	-1.081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	39953976	57208867	8278	0.0054
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	57212475	57252652	17	0.5491
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	57255290	68710223	6990	0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	68710686	68710954	6	-1.022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	68711045	112363822	26514	0.005
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	112363846	112364421	5	-1.8914
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	112364436	114109717	938	0.013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	114111763	114113826	2	-1.2455
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	114117572	144770300	21496	0.0062
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	144776300	144778951	9	-0.4845
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	8	144790132	146268959	506	0.0402
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	36587	582306	481	0.0186
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	582552	582567	2	-1.7888
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	582718	592903	28	-0.0526
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	596699	596961	4	-2.2142
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	597307	23351805	19957	0.003
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	23353115	23363484	8	-2.2307
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	23368488	26042293	1933	-0.0052
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	26042884	26043744	2	-1.3668
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	26046086	40498680	8896	0.0053
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	40503042	40582906	12	-0.459
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	40601923	43552158	93	0.003
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	43575109	43720905	24	-0.6961
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	43730342	45424842	129	0.003
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	45424855	45424865	2	1.2777
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	45446350	78744280	6668	0.0047
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	78746701	78756684	5	-1.0232
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	78756709	84979540	4334	-0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	84982473	84982506	2	-1.228
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	84988723	115156304	21565	0.0026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	115158735	115176814	23	0.4716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	115180974	116122632	647	0.0193
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	116127223	116133171	5	0.7541
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	9	116134002	140211215	15134	0.0082
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	62759	18123568	14902	0.0099
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	18146449	18239819	10	-1.0647
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	18263653	24415269	4345	0.0063
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	24417680	24418914	12	0.505
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	24418957	31286516	5045	0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	31291340	31291828	12	-0.6731
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	31291891	45613625	7265	0.001
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	45632493	45931287	5	0.8722
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	45947683	47241036	374	0.031
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	47417400	47468066	4	-1.1806
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	47480482	48522382	295	0.0268
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	48548797	48665901	9	-0.7771
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	48702225	59839259	7618	0.0093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	59841783	59841973	2	-1.1488
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	59842384	66976282	4875	0.0042
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	66977929	66984452	28	-0.4566
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	66992801	127057480	40303	0.0069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	127058623	127062933	2	-1.1635
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	10	127064050	135356694	6045	0.0038
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	11	188510	4926943	2488	0.0077
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	11	4928581	4932848	23	0.7238
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	11	4932910	5735099	788	-4e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	11	5739501	5766037	43	0.2701
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	11	5768936	55132856	31346	0.004
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	11	55133074	55198894	40	-0.64
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	11	55200787	134449982	52464	0.0069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	20703	8248774	5555	0.0057
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	8253317	8269518	11	0.4672
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	8285095	9525137	644	0.0093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	9529176	9619559	23	-1.5687
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	9626236	11113977	1049	0.0189
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	11115956	11132799	8	-1.5978
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	11143141	33185927	15602	0.0048
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	33192673	33198641	27	-0.6364
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	33199627	44186092	5626	-1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	44190705	44195804	4	-1.5338
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	44199559	59158871	8703	0.0166
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	59160866	59163615	6	-0.8645
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	59166825	130686668	47276	0.0096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	130698537	130710101	27	0.3293
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	12	130710149	132288262	558	0.0244
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	13	17924949	17994936	7	0.1373
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	13	18000179	18160112	38	0.5058
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	13	18162827	56611234	26087	0.0075
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	13	56611237	56662164	28	0.293
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	13	56662180	71374989	9025	0.0013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	13	71375556	71378557	4	-2.8222
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	13	71378606	114126499	29163	0.0039
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	18072124	18627041	40	0.159
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	18632139	18914107	23	-0.2776
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	18916877	19175252	13	0.1272
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	19188667	19493212	114	-0.3977
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	19494766	40678108	13655	0.0055
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	40680246	40726999	14	-0.7109
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	40727099	53424811	7795	0.006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	53424826	53424943	4	-0.858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	53425183	69727705	10536	0.0069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	69727738	69727797	2	-1.5119
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	69728692	89617784	13114	0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	89618727	89620145	3	-1.1219
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	89620544	105531947	9850	0.0081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	105550720	105558085	5	-0.6866
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	105559236	105598011	17	-0.0328
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	105601409	105632486	17	0.5678
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	105638145	105848388	102	0.0704
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	105854089	105873098	8	0.7716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	14	105886988	106356482	308	0.0301
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	18276341	18529787	57	0.0772
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	18544080	18841578	47	-0.2628
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	18846002	18850056	14	-1.093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	18850174	19535709	181	-0.3501
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	19537879	28332322	4840	-0.0071
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	28332785	28348859	6	-0.8875
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	28350062	51572283	14403	0.0086
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	51572331	51572571	5	-0.7645
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	51577539	95609413	29093	0.0082
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	95618796	95633191	11	-0.9038
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	95634653	100262764	3431	0.0078
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	15	100276779	100286563	2	-1.3513
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	777	32496120	20173	0.0109
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	32496122	32531747	13	0.5051
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	32531840	34916829	627	-7e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	34926795	34934173	6	-0.7699
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	34945191	69459499	15631	0.0054
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	69459707	69461094	2	-1.1094
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	69461527	71924322	1388	-0.0088
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	71926561	71926687	3	1.1227
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	71927865	74692533	1861	-0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	74700940	74713922	16	-0.9106
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	74716420	76929109	2153	-0.0024
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	76929941	76942266	17	-2.0436
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	16	76942502	88815036	10642	0.0217
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	526	18260587	11448	0.0103
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	18296117	18394162	26	0.4153
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	18399997	36671898	9504	0.0195
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	36675211	36683712	24	0.4327
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	36683976	41518102	2512	0.0228
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	41518125	41667752	114	0.2839
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	41681331	41785076	21	0.0071
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	41791196	42107479	40	-0.5126
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	42120174	45292316	1623	0.0114
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	45293472	45296872	3	-1.1144
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	45297374	51514043	4185	0.0026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	51515913	51527590	26	-0.7676
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	17	51527822	78643088	15789	0.0137
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	1543	1211984	862	-0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	1214564	1214703	2	-1.075
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	1217832	4960506	2666	-0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	4961659	4963589	2	-1.9274
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	4964006	24441996	11582	0.0026
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	24442054	24447534	8	-0.7442
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	24449765	27220034	1708	0.0126
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	27228622	27303612	73	0.5131
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	27306631	28047706	506	0.0085
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	28050030	28050404	2	-1.2769
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	28051919	36514418	5442	0.0063
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	36514432	36524070	22	-0.474
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	18	36524196	76116029	27968	0.0059
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	19	41910	59410780	26725	0.0147
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	19	59410817	59445152	20	0.5608
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	19	59445289	60974181	761	0.027
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	19	60974347	60974879	3	-1.0309
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	19	60978105	63789666	1850	0.0196
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	20	9305	1508999	1207	0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	20	1509580	1541893	41	-0.5633
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	20	1545946	28042184	18820	0.0066
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	20	28050463	28119491	19	-0.3893
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	20	28119554	60553932	21685	0.0103
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	20	60555386	60555641	2	-1.12
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	20	60557354	62426597	731	0.0303
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	21	9758742	13358662	129	0.0858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	21	13368583	14069323	299	-0.5556
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	21	14080310	25748576	8481	0.0073
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	21	25754121	25754480	2	-1.7369
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	21	25754875	46921385	15509	0.0118
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	22	14432528	20798619	3302	0.0366
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	22	20803918	20804613	6	-0.8942
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	22	20811498	22601745	1284	0.046
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	22	22613016	22667307	31	0.5681
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	22	22667949	49581321	18949	0.0116
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	108477	17095515	10576	0.016
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	17096581	17096764	6	-0.7862
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	17096834	20451693	1768	0.0086
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	20456331	20457156	2	-1.1868
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	20461986	74315791	26819	0.0073
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	74319945	74383486	27	0.5374
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	74389016	76266264	964	0.0076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	76270041	76461534	19	0.6996
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	76462887	90851839	7607	-0.0034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	90853123	90858396	12	-0.452
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	90858427	139630403	27402	0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	139631877	139632334	3	-1.1669
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	X	139636222	154835548	9453	0.0155
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_A10_755794	Y	2710438	57427647	8589	-1.0815
