Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	51598	17063449	8833	0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	17067742	17155012	64	-0.4084
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	17155662	72535958	34069	0.0064
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	72541006	72583721	47	-1.247
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	72583736	96215238	15418	-0.0079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	96216066	96219183	2	-1.5128
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	96219231	103960907	4687	-0.0086
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	103965022	104027091	14	-0.4898
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	104041212	110025907	3605	-0.0074
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	110025950	110052665	44	0.3505
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	110052680	121184502	7156	-0.0035
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	142718406	147653583	1352	0.4649
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	147654217	147943765	24	-0.1229
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	147957888	150823038	1487	0.451
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	150826908	150853218	28	-0.1008
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	150857118	156793208	3529	0.4843
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	156793995	156794148	2	-0.8542
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	156796012	157133197	301	0.4955
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	157135125	157136383	2	-0.9226
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	157141442	159745617	1645	0.466
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	159746062	159905104	55	1.0421
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	159905137	163303619	2698	0.4838
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	163312089	163312178	3	-0.9896
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	163313139	173063028	6855	0.4733
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	173063179	173068495	18	-0.6598
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	173068543	187289596	9500	0.4803
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	187293846	187297984	6	-0.8923
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	187299103	188224723	659	0.4616
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	188225406	188226803	10	-0.1098
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	188227308	246776239	40378	0.4811
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	246776293	246835609	20	-0.2002
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	1	246838180	247191011	163	0.4169
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	2784	725976	517	-0.0328
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	727505	737161	4	-1.5201
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	741300	4183562	2469	-0.0212
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	4191739	4201442	38	-0.4285
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	4201570	25088711	15267	-0.0042
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	25090223	25091003	3	-1.6419
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	25092768	32905033	4529	0.004
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	32905690	32906267	3	-1.2971
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	32907192	34544573	1287	0.013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	34552819	34590561	46	-0.6551
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	34590667	35829477	878	-7e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	35831294	35841451	7	0.8903
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	35850977	41091739	3945	0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	41091947	41099391	23	-0.7041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	41104737	46341690	3881	1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	46343299	46345776	4	-1.694
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	46346186	50480772	2801	0.0054
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	50481212	50481802	2	-1.2858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	50482059	52612257	1510	-0.0152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	52612272	52634878	26	0.4516
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	52634901	146578555	53667	-0.0061
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	146580874	146583404	24	-1.7401
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	146594276	184502645	23311	-0.0147
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	184502759	184510686	16	-0.9241
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	184516834	237468105	32738	-0.0089
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	237468272	237468673	4	-1.1668
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	2	237468721	242738129	3080	-0.0067
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	35345	46768381	33261	-8e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	46776821	46824593	40	-0.7049
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	46834483	61101861	8657	0.0037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	61102245	61103057	3	-1.267
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	61105940	68828854	5908	0.0047
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	68828949	68830103	14	1.133
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	68831448	73495029	3495	1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	73495289	73500753	3	-1.2809
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	73507192	75651239	1441	0.0046
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	75655239	75678936	8	-0.9412
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	75691329	162178464	48986	-0.0101
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	162179561	162180427	4	-1.413
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	162184790	163989224	1159	-0.0033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	163990872	164098609	67	0.4272
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	164106536	164111308	9	-0.6767
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	164111337	164197211	69	-0.0469
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	164200421	164202256	2	-3.0559
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	164208853	170212874	3371	-0.0148
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	170216096	170221322	2	-1.7478
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	170222521	190843448	13244	-0.008
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	190846372	190847332	11	-0.7641
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	190853682	194361700	2505	-0.0166
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	194363167	194365597	13	1.1127
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	194369129	196914788	1498	0.001
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	196914881	196964365	37	0.3725
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	3	196964532	199380515	1173	-0.0102
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	2281	9066075	5249	0.0074
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	9070328	9088443	9	1.115
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	9095185	9819488	546	0.0312
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	9832514	9844280	34	-1.6041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	9844366	34446701	16993	-0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	34449910	34497735	44	-0.3566
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	34500578	34501120	2	-2.159
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	34506267	115394772	47331	-0.0093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	115394793	115401624	22	0.5257
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	115403678	153009236	22161	-0.0162
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	153010983	153012017	12	-0.9682
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	153012341	162093450	5881	-0.0196
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	162099468	162104408	23	-0.5843
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	162104417	172613832	6678	-0.0157
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	172613848	172613863	2	-1.4167
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	172614019	173224503	402	-0.0345
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	173225723	173226108	12	0.5856
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	4	173232554	191261904	12134	-0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	68532	751472	310	-0.0458
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	751505	826568	27	0.7627
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	832860	12853889	9887	-0.0135
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	12868780	12891533	14	-1.3921
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	12902201	46307687	20578	-0.0105
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	46308278	46309259	5	-2.1856
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	46313969	52437805	1714	-0.0167
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	52440276	52441039	2	-3.3818
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	52445196	54980019	1699	-0.0245
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	54980027	54984946	3	-1.1943
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	54985601	57357403	1661	-0.0182
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	57361784	57369290	32	1.2414
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	5	57374114	180722926	77209	-0.0092
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	94661	198861	99	-0.0096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	199267	325821	96	-0.7294
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	326149	12414218	9568	0.0011
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	12414297	12415840	2	-1.5465
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	12416068	29945051	11977	-0.0053
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	29945166	29957246	16	0.7117
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	29958175	32539270	1187	0.0274
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	32539530	32678024	36	-0.4243
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	32678343	32732282	29	0.1376
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	32732569	32734596	5	-0.9224
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	32758590	33816147	627	0.0244
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	33816754	33818016	3	-1.195
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	33821588	54039234	13118	-0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	54039339	54039814	4	-1.6333
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	54043307	65767450	4595	-0.0119
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	65768120	65770513	3	-3.7473
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	65774105	77471874	7687	-0.0103
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	77472552	77525357	47	-0.3155
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	77525815	79019593	972	-0.0096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	79019608	79091904	114	-0.827
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	79095953	103841518	15493	-0.0129
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	103841522	103868754	47	0.5487
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	103872163	160952709	36976	-0.0096
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	160952737	160953273	4	1.1214
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	160988032	165218806	3320	0.0064
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	165219292	165229446	2	-2.2867
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	6	165229518	170892930	3948	-0.0105
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	52911	54353999	38589	-6e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	54354003	54354011	5	-2.2765
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	54360982	56729607	1574	0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	56735501	56736308	2	-2.2684
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	56739660	125832792	37315	-0.0069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	125832887	125834112	11	1.077
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	125834113	133421147	4689	5e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	133421654	133424709	2	-1.7642
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	133424724	141409593	5245	-0.006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	141416112	141417001	10	-1.8573
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	141417096	141427982	4	-4.9858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	141428244	141438377	27	-1.7977
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	141438576	142928980	949	0.0035
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	142929090	143057999	42	0.4049
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	143058088	143061509	7	-0.4431
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	143061967	143198992	52	0.4643
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	7	143203099	158819765	10010	-0.0113
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	21254	585875	334	0.1599
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	585892	585908	2	2.1572
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	591043	2689341	1785	0.1715
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	2690940	2691306	7	-0.8392
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	2694578	5581675	3968	0.1779
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	5586134	5591903	27	-0.5307
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	5594496	12072406	5182	0.1858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	12207108	12291857	47	-0.2791
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	12305298	13090583	553	0.189
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	13091033	13091382	3	-1.0283
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	13092387	18309434	4841	0.188
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	18310437	18315465	4	-1.4242
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	18315667	33290164	10873	0.1792
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	33295295	33313563	16	-0.9189
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	33314997	39349340	3270	0.1787
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	39349482	39494315	55	-0.2998
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	39498824	112363846	42073	0.1701
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	112364214	112364421	4	-1.8081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	8	112364436	146268959	22949	0.1673
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	36587	17707228	15999	-8e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	17707577	17707690	2	-2.0546
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	17709459	41975187	15360	-0.006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	42013107	43177963	24	-0.573
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	43255666	45052357	146	0.1869
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	45052372	66062879	80	-0.2517
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	66210379	67673801	54	0.0337
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	67675871	67678367	8	1.158
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	67699736	74470431	3489	-0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	74474808	74474889	2	-1.2809
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	74475723	77115179	1660	-0.0019
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	77116756	77133783	7	-0.7422
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	77136350	84554591	5448	4e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	84566096	84574064	10	-0.8226
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	84581506	85388332	648	-0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	85392277	85395624	6	-1.0047
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	9	85397840	140211215	36981	0.0043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	62759	13096269	10959	-0.003
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	13096556	13098846	25	-0.9177
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	13104229	17562448	3716	0.0019
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	17562689	17562705	2	-1.3253
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	17563047	18123568	193	0.0019
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	18146449	18176754	4	-1.3211
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	18190767	135084182	76064	-0.0015
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	135092863	135222377	103	0.5148
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	10	135222587	135356694	44	-0.0326
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	188510	49656143	33878	-0.0038
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	49657894	49714247	22	-0.6403
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	49714343	55119916	762	-0.0436
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	55130608	55209110	57	-0.632
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	55209553	67232201	6243	-0.0049
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	67247590	67505898	75	0.4436
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	67520656	81176453	8307	0.0034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	81181116	81194806	11	-0.6141
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	81200280	84247656	2005	0.0039
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	84247748	84247806	2	-1.3792
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	84247827	89339152	3316	-0.0036
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	89367331	89509652	27	-0.651
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	89521846	106735929	12485	-0.0109
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	106743866	106762599	10	-0.7093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	11	106764281	134449982	19949	-0.0058
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	20703	85404909	53778	-0.008
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	85405959	85406086	2	-2.7397
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	85414146	112616218	17680	-0.0065
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	112618540	112618544	2	-1.5687
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	112621848	118260253	4424	0.0079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	118263350	118263394	2	1.4493
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	118267871	125560866	4129	0.0067
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	125560899	125570543	7	-0.9132
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	125573428	127794839	1975	-0.0183
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	127796466	127798498	7	-1.0265
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	127799941	129328204	1380	-0.0265
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	129328957	129329860	2	-2.051
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	129330893	130124983	606	-0.0066
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	130126126	130126394	2	-1.4016
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	130128411	130297897	124	0.0037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	130298610	130391312	84	-0.9375
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	130399163	130686200	295	-0.0108
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	130686539	130720504	33	-0.4175
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	12	130720607	132288262	554	-0.0389
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	17924949	21003664	1749	-0.0224
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	21013232	21144327	73	0.5202
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	21150959	22527187	1074	1e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	22527210	22531515	13	-0.5163
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	22536195	36969135	10660	-0.0084
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	36970036	36982757	16	-2.5774
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	36986330	37806702	614	-0.0278
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	37807267	37811382	2	-1.5396
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	37813290	57482791	12384	9e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	57488282	57495031	6	-1.2441
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	13	57500053	114126499	37738	-0.0092
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	18072124	18472242	26	0.034
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	18486191	19493212	164	-0.43
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	19494766	26605274	4829	0.0029
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	26606092	26606230	2	-2.0648
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	26608558	52093408	15787	-0.0218
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	52097202	52109878	3	-1.4806
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	52111299	87631051	23203	-0.0161
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	87637670	87644857	4	-1.8095
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	87645895	105125942	11000	-0.0133
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	105149735	105238532	16	-1.8702
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	105265522	105848388	248	-0.0852
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	105854089	105873098	8	1.1215
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	14	105886988	106356482	308	-0.0043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	18276341	18463975	47	0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	18466953	18551327	12	-1.2383
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	18652835	18841469	44	-0.2226
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	18841576	18850174	17	-1.064
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	18850404	19864595	214	-0.2602
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	19874434	19884565	7	-1.1466
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	19886365	32510868	7480	-3e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	32514464	32514481	2	0.8218
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	32514914	32650015	68	-0.6453
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	32656188	51779125	11814	0.0033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	51779260	51779737	3	-1.234
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	51780311	67116869	10398	0.0065
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	67118339	67118414	2	1.6778
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	15	67124729	100286563	21959	0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	777	31920779	20079	-0.0036
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	31931913	32496123	90	-0.2432
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	32496402	32496410	5	-3.4644
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	32516775	32549930	17	-0.6201
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	32550213	33149454	60	-0.0676
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	33208395	33283385	11	-0.5045
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	33288267	33330564	4	-1.429
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	33339661	33618281	86	-0.4426
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	33624457	33919669	49	-0.0965
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	34054852	46731833	1179	-0.7945
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	46732060	46733997	5	-3.6669
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	46734144	54352452	5692	-0.8399
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	54352549	54374147	20	-2.0951
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	54374206	63541382	5880	-0.8445
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	63542288	63543734	2	-4.0718
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	63543782	69396838	3124	-0.7992
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	69399598	69759990	220	-0.0027
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	69760298	88675950	15746	-0.8752
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	16	88683026	88815036	8	-0.2314
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	526	18299671	11448	0.0094
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	18299674	18405946	27	-1.3522
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	18409922	20278965	815	-0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	20279050	20354038	18	-0.5079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	20371772	36676616	8670	4e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	36676629	36676736	3	-1.5375
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	36676783	36683475	11	-0.7357
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	36683683	36683976	4	-1.9621
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	36684057	41532863	2523	0.0068
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	41532920	41719947	114	-0.2634
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	41750187	42120174	49	0.3671
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	17	42139835	78643088	21616	0.004
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	18	1543	18926553	11499	-0.0019
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	18	18933858	18937397	6	-1.0259
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	18	18943238	38310567	12571	4e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	18	38310599	38312393	25	-0.6696
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	18	38314935	76116029	26723	-0.0059
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	41910	40541162	16822	0.0084
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	40541333	40553688	22	-1.9392
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	40558584	47964586	3726	0.0033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	47972068	48234671	124	-0.6831
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	48240854	59944197	6325	-0.0031
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	59975655	60070511	47	-0.7587
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	60071267	60974181	433	0.0063
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	60974347	60974879	3	-3.1431
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	19	60978105	63789666	1850	0.0061
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	20	9305	1508999	1206	-0.0111
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	20	1509580	1541893	41	1.6498
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	20	1545946	3968945	1674	-0.01
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	20	3969135	3970410	2	-1.7273
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	20	3971655	62426597	39565	0.0045
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	21	9758742	43498670	22466	9e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	21	43509017	43514390	2	-1.6024
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	21	43514563	46921385	1950	-0.0039
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	22	14432528	48299026	22948	0.0098
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	22	48299100	48299211	2	-1.9209
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	22	48301100	49581321	609	-0.0324
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	X	108477	76266264	40162	0.0152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	X	76270041	76295047	2	2.1155
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	X	76295049	120858075	24248	0.006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	X	120858126	120861541	3	-1.3827
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	X	120865193	154835548	20235	0.0046
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C02_755852	Y	2710438	57427647	8590	-1.189
