Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	1	3218610	85979932	47261	-0.0327
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	1	85980350	86003166	11	0.487
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	1	86006009	120527361	20519	-0.0332
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	1	149879545	247813706	61353	0.77
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	2	484222	17388272	10695	-0.0281
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	2	17396067	17396229	2	1.0781
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	2	17396548	62876246	25765	-0.0326
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	2	62883868	62884120	4	-0.8388
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	2	62884882	242476062	94822	-0.0303
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	3	2212571	149858650	81947	-0.0324
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	3	149859099	149859275	3	-0.9074
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	3	149862441	190017636	21057	-0.0339
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	3	190019551	190019560	2	-1.1006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	3	190022148	197538677	3374	-0.0405
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	1053934	65115762	35345	-0.0289
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	65117872	65118025	2	1.4892
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	65120627	84536828	10683	-0.0305
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	84539176	84540258	5	-1.251
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	84543096	113797986	16408	-0.0356
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	113800165	113849042	32	-0.7846
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	113854560	125994844	6940	-0.0354
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	125996360	125996961	4	-0.8284
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	4	126000196	188763651	33338	-0.0335
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	5	914233	6601322	4039	-0.0339
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	5	6601498	6602544	2	-1.0611
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	5	6602592	11092470	3186	-0.0314
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	5	11095069	11095315	2	-1.2103
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	5	11098023	180360469	93275	-0.0332
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	6	1014281	78554891	42951	-0.0329
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	6	78562076	78571566	10	-0.7369
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	6	78578306	114880910	20534	-0.033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	6	114881318	114881387	2	-1.0836
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	6	114886208	148501944	19824	-0.0329
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	6	148506612	148506944	2	-1.1961
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	6	148507255	170903919	13171	-0.0322
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	7	705284	132367230	67615	-0.0324
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	7	132367580	132368327	2	-1.6415
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	7	132368469	134982450	1610	-0.037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	7	134982506	134983454	2	-0.9788
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	7	134983855	154064259	9519	-0.0331
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	7	154066061	154066805	3	-0.9673
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	7	154066831	158385118	2571	-0.0272
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	8	617667	14950168	6955	-0.0265
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	8	14950777	14951243	3	-0.8919
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	8	14954550	52464713	20244	-0.0304
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	8	52465778	52469355	6	-1.0009
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	8	52496113	145232496	54336	-0.0349
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	9	789932	99425383	42539	-0.0325
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	9	99427469	99445805	7	-0.9298
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	9	99446065	127047574	18487	-0.0364
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	9	127050544	127051622	2	0.9546
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	9	127052503	140938752	6989	-0.0281
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	10	415240	3138673	1285	-0.0219
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	10	3140461	3140540	2	-1.4878
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	10	3141086	135225087	79590	-0.0375
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	11	456120	134142530	77242	-0.0318
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	12	889902	47578000	24188	-0.032
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	12	47578789	47579248	3	-0.8474
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	12	47582601	64561823	9336	-0.0312
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	12	64564157	64634601	37	0.4415
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	12	64635725	133161346	40370	-0.033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	13	19450806	99303440	46442	-0.0294
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	13	99303782	99304000	2	-1.1363
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	13	99305631	114987458	10206	-0.0268
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	14	20501368	105988038	49450	-0.029
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	15	23687685	101884307	44525	-0.0329
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	16	653459	62304835	24075	-0.0298
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	16	62308855	62309415	3	-0.9188
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	16	62310192	82578215	12882	-0.0258
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	16	82579688	82579811	2	-1.2837
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	16	82579853	89379936	3832	-0.0198
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	17	987221	53398459	22462	-0.032
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	17	53399505	53407649	8	-0.568
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	17	53409613	80917016	14516	-0.0323
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	18	329586	5275277	2526	-0.0264
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	18	5282442	5282665	2	-1.1798
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	18	5290198	76731826	39918	-0.0289
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	18	76734830	76735252	3	-0.9802
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	18	76736062	77109240	207	-0.0314
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	19	284018	58878226	23946	-0.0267
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	20	455764	57131000	34117	-0.0316
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	20	57131470	57132666	2	-1.5388
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	20	57136138	62219837	3159	-0.0253
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	21	15347621	47678774	20585	-0.0268
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	22	17423930	43040434	12398	-0.0298
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	22	43044765	43046373	2	-1.0599
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	22	43051017	47529458	3048	-0.0226
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	22	47530945	47530981	2	0.9875
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	22	47531320	49331012	1476	-0.0237
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	X	3157107	106249512	41620	5e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	X	106251006	106251399	2	-1.0716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_C06_755856	X	106253602	154905589	22188	0.0023
