Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	3218610	55118162	27281	-0.0421
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	55119144	55119534	4	-1.133
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	55121358	116830297	38281	-0.0407
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	116831892	116834105	7	-1.0918
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	116837825	120527361	2198	-0.0421
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	149879545	165616881	9292	0.3836
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	165617921	165617972	2	-0.9531
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	165619712	227774905	39212	0.3781
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	227777149	227778511	3	-0.8926
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	1	227785062	247813706	12833	0.3776
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	2	484222	130034087	67741	-0.0378
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	2	130034314	130034326	2	-1.5608
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	2	130034440	185843997	31528	-0.031
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	2	185850306	185853355	3	-1.4194
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	2	185853479	242476062	31971	-0.0288
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	3	2212571	42356836	23914	-0.0347
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	3	42358886	42368882	29	-0.8345
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	3	42372651	116204301	39347	-0.0298
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	3	116206725	116215739	6	-0.8958
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	3	116217615	122779930	3838	-0.033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	3	122780164	122783953	5	-1.0239
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	3	122788006	197538677	39216	-0.0342
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	4	1053934	188763651	102718	-0.0375
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	5	914233	180360469	100476	-0.0393
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	6	1014281	6602763	4076	-0.0357
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	6	6605863	6606182	2	1.2772
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	6	6606227	23795695	12028	-0.0454
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	6	23796178	23796212	3	-1.0181
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	6	23797913	33734128	3567	-0.0436
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	6	33734376	33737436	3	-1.3762
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	6	33742513	170903919	76790	-0.0355
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	705284	26563023	14040	-0.0369
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	26565493	26566073	5	-1.7663
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	26570142	34895350	5273	-0.0412
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	34899573	34901588	3	-5.8094
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	34903764	113097680	37832	-0.0372
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	113100589	113102425	5	-1.0904
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	113103264	119746813	3576	-0.0288
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	119747259	119747382	2	-1.1402
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	119748883	120144608	194	-0.0183
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	120144908	120144923	2	-1.1775
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	120147377	129686608	5098	-0.0335
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	129694738	129698767	2	-1.8536
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	7	129699467	158385118	15260	-0.0358
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	617667	11079598	4702	-0.0462
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	11082183	11083420	2	-2.1068
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	11084480	60591613	27406	-0.0376
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	60595880	60598517	2	-1.65
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	60599115	127399987	38462	-0.0372
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	127403650	127404504	2	-1.5884
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	127405002	132027184	3241	-0.041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	132027439	132028165	3	-1.0495
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	132029719	134207963	1577	-0.0442
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	134209149	134211241	2	-1.606
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	8	134211695	145232496	6128	-0.0448
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	9	789932	110426969	49207	-0.0399
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	9	110428253	110430408	4	-0.9827
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	9	110435299	133793861	15434	-0.0446
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	9	133801293	133801569	2	-1.6195
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	9	133807327	140938752	3354	-0.027
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	10	415240	135225087	80855	0.3707
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	456120	24538644	15498	-0.0385
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	24540890	24541176	2	-1.8844
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	24542132	67104772	19995	-0.0383
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	67105982	67224839	44	0.2079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	67227541	76141116	4386	-0.0317
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	76143019	76148282	5	-0.9699
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	76148742	126357908	31997	-0.0367
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	126359805	126360403	2	-1.9054
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	11	126367410	134142530	5289	-0.0406
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	12	889902	133161346	73911	-0.0167
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	13	19450806	95413172	44017	-0.0316
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	13	95414554	95488528	57	0.3917
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	13	95489714	102602952	4562	-0.0447
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	13	102607422	102607752	3	-1.1265
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	13	102608285	103598645	794	-0.0408
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	13	103599053	103602571	4	-1.2663
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	13	103604373	114987458	7191	-0.0449
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	14	20501368	105988038	49427	-0.0378
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	15	23687685	97190166	41844	-0.0401
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	15	97194468	97206709	12	0.5786
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	15	97210875	98779862	1040	-0.0426
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	15	98781880	98783667	4	-1.1753
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	15	98786592	101884307	1610	-0.0527
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	16	653459	89379936	40777	-0.0447
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	17	987221	80917016	36974	-0.0387
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	18	329586	13937454	8051	-0.0461
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	18	13938874	13939578	2	-2.4426
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	18	13943768	77109240	34589	-0.0415
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	19	284018	58878226	23934	-0.0385
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	20	455764	62219837	37258	-0.0432
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	21	15347621	15694583	181	-0.0221
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	21	15697042	15697438	4	-0.9767
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	21	15697749	47678774	20393	-0.0383
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	22	17423930	43223949	12470	-0.064
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	22	43225174	43225192	2	-1.4786
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	22	43226599	43255140	21	-0.1055
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	22	43256778	43256798	2	-2.1983
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	22	43259953	44818108	1180	-0.0651
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	22	44818518	44818636	3	-2.6619
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	22	44821094	49331012	3229	-0.0712
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	3157107	5964716	426	-0.0039
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	5964744	5966568	2	-1.4851
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	5970948	16553644	4893	0.0076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	16554542	16554568	2	-1.3651
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	16557589	32643588	8256	0.0063
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	32644716	32645350	2	-1.7974
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	32651365	49370374	7053	0.0018
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	49370901	49415574	24	-0.9302
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	49416734	62573933	3297	-3e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	62578788	62595725	7	-0.5983
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	62595831	73164572	4156	-0.0015
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	73166711	73168350	2	-1.7407
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_E07_755816	X	73173965	154905589	35683	0.0019
