Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	51598	16022502	8419	-0.0079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	16026084	16026512	6	-1.3364
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	16026788	20755790	3016	-0.0148
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	20756009	20756403	4	-0.9286
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	20757528	30511121	5157	-0.0128
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	30511886	30514083	4	-1.0872
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	30514243	41121839	5957	-0.0104
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	41124128	41147707	15	0.4721
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	41149087	72541504	20405	0.0033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	72541524	72583736	45	0.5298
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	72584492	103965022	20111	0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	103965310	104104926	27	-0.4249
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	104105024	110034497	3608	0.0054
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	110034560	110046521	18	0.393
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	110047649	111177743	839	-0.0109
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	111178891	111189749	39	-0.6956
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	111193590	150821800	9147	-0.0142
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	150822151	150853218	36	0.8226
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	150857118	151026302	170	-0.0206
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	151028547	151058352	55	0.292
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	151060047	167483561	11333	-0.0123
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	167500598	167508390	7	-2.1889
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	167509025	186945753	12859	9e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	186951241	186957507	2	-1.166
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	186958909	187914780	603	0.0178
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	187915106	187915150	2	-1.4727
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	187918670	194981496	4747	0.0035
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	194994473	195068625	92	0.2577
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	1	195068695	247191011	35975	0.002
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	2784	10669140	8170	0.012
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	10670419	10803549	71	0.5369
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	10804637	33616467	15148	0.012
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	33619272	33623907	5	-0.7658
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	33625223	34502770	717	0.0142
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	34505902	34594143	64	0.3108
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	34594261	52608385	13053	0.0076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	52612257	52645628	37	-0.3584
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	52646332	86791198	21952	0.0044
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	86806581	86807365	2	1.5317
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	86823917	97383943	2135	0.0164
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	97385003	97575859	31	-0.3896
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	97583221	105753297	5145	0.0079
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	105755344	105757770	6	-0.9391
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	105758345	129354548	13894	0.0208
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	129354948	129356785	15	-0.7583
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	129356799	222179257	56647	0.0053
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	222179704	222179760	2	1.8134
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	2	222180806	242738129	13031	0.0072
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	35345	15271608	12331	0.0161
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	15272831	15272958	2	-1.0713
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	15274441	26401195	7618	0.0061
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	26409128	26414347	5	-0.8469
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	26420977	68828854	27927	0.0074
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	68828949	68830103	14	-0.9959
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	68831448	74579805	4360	0.0075
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	74581511	74581750	2	-1.5881
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	74581752	84766518	5573	0.0104
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	84770938	84785103	29	-0.2767
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	84785153	100427166	5998	0.0171
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	100427201	100432111	36	-0.4899
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	100433654	142025229	25546	0.0056
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	142028391	142029674	2	-2.6137
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	142043308	163606060	13283	0.0022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	163620294	163625399	14	-0.6232
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	163626942	163990886	259	0.0333
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	163990962	164108674	70	0.5521
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	164108689	164197211	73	-9e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	164200421	164202256	2	-2.3885
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	164208853	174719597	6297	0.0046
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	174723329	174772374	24	0.4853
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	174782887	183657226	5489	0.0075
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	183666152	183679512	10	-0.8875
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	183681078	196106723	8487	-0.005
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	196110340	196123134	11	-0.5588
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	3	196123769	199380515	1542	-0.0246
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	2281	9819488	5807	0.0145
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	9832514	9840596	28	-1.2667
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	9843312	11479341	1490	3e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	11486409	11488697	3	1.0133
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	11491473	61009774	30249	0.0144
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	61009907	61014212	3	1.0554
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	61018159	63350429	1339	0.0125
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	63352531	63354257	8	-0.5562
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	63362225	63813833	242	0.0216
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	63823873	63834508	6	-0.8041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	63837162	64376535	308	0.0204
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	64380064	64390818	28	0.4247
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	64390853	68967186	2864	0.0164
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	68970733	68970737	3	-1.6187
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	68977394	69021159	8	0.0456
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	69027207	69406991	79	0.4495
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	69408681	125678855	33883	0.0032
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	125679801	125682385	3	-1.4619
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	125682475	145143600	11678	0.0162
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	145143614	145262483	75	0.3556
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	145262960	173224503	17300	0.0102
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	173225723	173226108	12	0.5681
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	4	173232554	191261904	12136	0.0262
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	68532	26825253	18947	0.0201
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	26833517	26833601	2	-1.5487
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	26839641	57361784	16965	0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	57361920	57368311	25	-0.3482
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	57368401	97512764	23204	-0.0022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	97512922	97512981	3	1.2075
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	97517812	140198906	26939	0.0044
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	140204020	140223940	13	-0.6172
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	140232347	150873157	7066	0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	150873786	150873833	2	-1.2473
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	150874626	151494293	479	0.0176
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	151494364	151498544	15	-0.5699
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	151500464	177131055	17516	0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	177160157	177161185	2	1.373
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	177165211	180307129	1815	-0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	180311316	180350709	19	-1.8215
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	5	180365831	180722926	171	0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	94661	202353	102	0.0422
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	203265	309420	84	-0.4434
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	309468	23165616	17560	0.002
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	23168970	23168978	3	-1.1254
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	23172233	26840370	2543	-0.0168
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	26840385	26863894	16	0.404
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	26866009	29957246	1466	-0.0323
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	29958175	30024347	27	-0.4931
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	30024465	31394284	649	-0.062
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	31394510	31403932	6	-1.7232
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	31403966	54039110	14329	-0.0082
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	54039189	54039814	6	-0.7638
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	54043307	74648953	10527	0.0173
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	74649185	74658138	9	-2.1789
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	74660283	74764097	72	-0.022
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	74766429	74773741	3	0.8898
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	74775513	77071668	1397	0.0033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	77073620	77073646	3	-1.3858
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	77073713	77493251	296	-0.0165
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	77496587	77509392	19	-0.4297
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	77509408	103841518	16590	0.0094
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	103841522	103868754	47	0.7432
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	103872163	115302149	7256	0.0043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	115309225	115309299	3	-1.2018
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	115309483	157699483	27556	-0.0013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	157701252	157716064	3	1.2696
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	6	157716982	170892930	9440	0.0185
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	52911	5846784	3053	-0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	5850048	5852258	4	-1.1919
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	5855549	19475583	10831	-5e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	19476040	19500562	35	0.4334
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	19503534	39516514	14523	0.0076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	39520335	39525299	9	-0.9324
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	39529018	54353999	10146	0.0122
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	54354003	54354011	5	-1.8485
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	54360982	87503175	15892	0.0148
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	87508677	87510328	17	-0.6041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	87510882	109221021	12904	0.0025
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	109221034	109241094	35	-0.3389
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	109241146	113189787	2482	0.0187
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	113210103	113210205	4	-0.7751
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	113212283	125832210	7556	0.0051
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	125832718	125834112	13	1.2033
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	125834113	139760635	8798	-0.0059
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	139760892	139761016	2	-1.224
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	139765288	142154515	1632	0.003
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	142156294	142165614	27	0.7069
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	142165684	154020828	7333	0.006
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	154024104	154030546	4	-1.7339
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	154031763	154058605	27	-0.017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	154058931	154060493	4	-0.7522
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	7	154060590	158819765	3215	0.0295
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	21254	585875	335	0.0506
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	585892	585908	2	2.1515
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	591043	6814172	7389	0.036
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	6814411	6814596	5	-0.6773
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	6814609	7204462	117	0.0195
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	7204582	7864332	161	-0.279
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	7864777	7996009	29	0.0982
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	7996372	7999869	3	-1.0636
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	8000007	8015597	12	0.0419
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	8027373	8040626	10	-0.5248
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	8046614	11986960	3237	0.0191
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	12025135	12233614	12	-0.4085
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	12242492	13191152	668	-0.0041
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	13191836	13192073	3	-0.8984
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	13192223	15447431	2176	0.017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	15450652	15457818	8	-0.9579
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	8	15467641	146268959	81841	0.0075
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	36587	23353115	20473	0.0105
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	23353933	23363484	7	-2.7792
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	23368488	39295344	10805	0.0078
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	39300907	39304120	4	-1.986
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	39305036	43177963	110	-0.0093
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	43255666	44110436	51	-0.4138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	44112674	44344908	35	-0.0349
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	44364447	44569219	4	-0.8831
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	44667855	78310739	6361	0.0102
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	78312166	78313099	11	-0.7596
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	9	78315130	140211215	42091	0.0073
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	62759	24415269	19260	0.0036
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	24417680	24418060	11	-1.803
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	24418914	45576787	12323	0.0113
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	45613625	45931287	6	0.9043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	45947683	48522382	673	0.0693
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	48548797	48554762	2	-1.4934
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	48567024	51500366	1469	0.0199
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	51510990	51537240	3	-1.7128
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	51561926	66976085	11028	0.0153
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	66976164	66984436	29	0.3729
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	66984452	96485841	19361	0.0038
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	96487886	96548713	21	-0.5235
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	96549167	124334099	19033	0.0099
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	124334213	124336904	3	-3.8715
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	124336968	130893610	4946	0.0153
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	130893732	130900761	3	-1.3274
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	10	130900762	135356694	2978	0.0246
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	188510	4923952	2476	-0.0152
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	4923972	4932965	36	0.5161
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	4933069	5739552	788	0.0163
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	5739628	5764952	36	0.2911
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	5765624	22426056	12469	0.0066
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	22428177	22429334	4	-0.968
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	22429718	37090112	10473	0.0081
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	37090274	37090624	3	-0.9705
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	37090644	49664951	7605	0.0156
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	49667437	49703344	16	-0.6016
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	49714078	51033319	384	0.0477
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	51040151	51049446	4	-1.6115
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	51051627	81181116	15063	-0.0011
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	81181640	81194806	10	-0.6013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	81200280	89242221	5318	0.0097
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	89250992	89275845	2	-1.6476
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	89295887	124580589	24910	0.0076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	124580661	124588914	27	-0.8626
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	11	124593480	134449982	7554	0.0209
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	12	20703	33185927	22889	-0.0061
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	12	33192673	33198345	26	-0.6584
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	12	33198641	82687318	29301	-0.0043
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	12	82687421	82689372	3	-1.5536
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	12	82689410	108125558	16776	2e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	12	108125961	108127535	4	-0.9181
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	12	108133101	132288262	16118	0.0195
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	13	17924949	56649097	26137	0.0039
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	13	56656271	56687715	35	-0.591
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	13	56688010	63122206	3807	0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	13	63122793	63134693	9	-0.8216
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	13	63137564	114126499	34358	0.013
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	18072124	19270249	84	-0.0431
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	19270957	19493212	106	-0.2992
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	19494766	40678108	13654	0.0073
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	40680246	40707179	11	-1.9716
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	40707565	40723727	2	-7.5306
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	40726999	40739852	3	-1.109
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	40746090	69386218	18008	0.0014
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	69388390	69390616	2	-1.4647
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	14	69390744	106356482	23750	0.0083
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	18276341	18452025	43	0.0758
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	18452183	19419336	234	0.4159
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	19434563	19566875	28	-0.1307
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	19764921	19787133	4	0.8891
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	19788634	19792388	2	2.526
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	19794591	20088838	110	0.4412
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	20224763	28333305	4721	0.0257
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	28339437	28348859	2	-1.5123
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	28350062	32514481	2681	0.0087
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	32514914	32605609	61	-0.6167
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	32617545	45898752	8116	-0.0045
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	45900594	45900872	2	-1.7663
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	45901235	45995535	67	0.0824
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	45995571	45995826	2	-1.3108
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	45997010	63601155	11747	-0.0066
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	63603995	63605440	3	-1.8679
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	63609587	74665417	6550	-0.0073
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	74678296	74682830	22	-1.7388
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	74689234	80840216	3662	-0.0068
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	80843133	80905894	7	-1.155
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	80966604	90566759	6577	8e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	90566878	90567298	3	1.2922
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	15	90567762	100286563	7444	0.0032
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	777	11530870	8703	0.0166
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	11536965	11537434	3	-1.1687
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	11537449	12556360	727	0.0084
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	12556479	12556496	2	1.9127
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	12557748	14742568	1687	0.017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	14796096	14878916	12	0.3313
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	14880494	14897340	5	0.8292
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	14956269	15023758	63	0.2935
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	15032942	32066363	8906	0
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	32084681	32496123	66	-0.3138
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	32496402	32496407	4	-3.6916
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	32496410	33009105	77	-0.1295
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	33149454	33539331	90	-0.3818
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	33550900	54352715	6990	0.0247
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	54353890	54379945	22	-0.5354
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	16	54387058	88815036	25174	0.0101
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	526	15452858	10036	-0.0094
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	15453791	15487515	5	-0.8027
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	15495003	18302411	1412	-0.0154
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	18305567	18405946	25	-0.6832
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	18409922	36676616	9507	-0.0076
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	36676629	36684057	19	-0.63
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	36686250	41518916	2513	-0.024
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	41521621	41719947	124	0.4926
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	41750187	42139835	50	-0.3388
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	42139861	74878384	19986	-0.01
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	74879748	74900696	17	0.5224
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	74912218	77950286	1233	-0.0231
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	77954338	77960103	3	-1.1564
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	17	77960642	78643088	381	-0.024
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	18	1543	40228816	25236	0.0116
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	18	40230884	40232623	6	-0.9405
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	18	40236669	76116029	25603	0.0139
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	19	41910	8317656	2959	-0.037
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	19	8318172	8320301	2	-2.5894
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	19	8327007	40541061	13866	-0.0092
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	19	40541149	40562276	30	-0.3787
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	19	40566223	58210559	9064	-0.0297
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	19	58211350	58244041	21	0.3513
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	19	58246052	63789666	3416	-0.0366
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	20	9305	1508543	1201	-0.0121
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	20	1508562	1541893	47	-0.3989
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	20	1545946	58998640	39458	0.007
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	20	59002420	59023596	50	0.8616
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	20	59023879	62426597	1747	3e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	21	9758742	19669384	4302	0.0099
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	21	19671937	19675547	4	-0.8902
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	21	19675560	27202384	5726	0.0097
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	21	27204531	27204723	3	-1.3683
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	21	27205475	46921385	14386	-0.0055
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	14432528	18853346	2153	-0.0248
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	18871884	18879111	2	1.2562
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	18992706	19795672	698	-0.0738
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	19795835	20164248	38	0.2604
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	20170434	20798619	411	-0.0445
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	20803918	20804613	6	-2.4461
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	20811498	21082462	341	-0.0215
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	21082680	21082880	4	-1.2998
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	21087321	23991698	1813	-0.0169
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	23993985	24248709	294	0.4477
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	22	24252342	49581321	17810	-5e-04
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	X	108477	24505335	15062	0.0017
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	X	24505562	24505668	3	-1.3291
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	X	24507870	150043556	67159	0.0057
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	X	150044592	150046117	2	-1.8637
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	X	150047213	154835548	2430	-0.0031
GAMMA_p_TCGA_b103_104_SNP_N_GenomeWideSNP_6_H05_755784	Y	2710438	57427647	8588	-0.8594
