Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	51598	25468468	14157	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	25468534	25491518	14	0.7187
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	25491627	72541504	28786	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	72541524	72583736	45	-0.9571
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	72584492	103960907	20091	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	103965022	104027091	14	-0.7283
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	104041212	105814899	933	0.0137
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	105820728	105825578	18	0.5187
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	105825593	110034497	2671	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	110034560	110041701	16	-0.9294
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	110044476	143543612	7222	0.0105
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	143553915	143579717	6	-0.6922
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	143580441	146851961	1092	-0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	146894193	146903393	4	-1.3895
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	146903515	150822330	1696	-0.0031
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	150822391	150853218	34	0.2751
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	150857118	151026302	170	0.0358
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	151028547	151034905	33	-0.3136
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	151034962	173062889	14874	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	173063028	173068463	17	-0.6791
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	173068477	194976383	14651	0.0085
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	194977690	195089940	102	0.2826
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	195090236	246791857	35746	0.0079
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	246802698	246863836	35	-0.5253
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	1	246875180	247191011	144	0.0348
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	2784	34373977	23992	0.0065
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	34377482	34379084	2	-2.0314
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	34379471	34506083	83	0.0161
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	34506375	34590561	58	0.5375
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	34590667	52607972	13033	0.0084
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	52607984	52608385	6	-0.832
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	52612257	87421845	22173	0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	87421858	87631995	46	-0.335
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	87639628	97484644	1897	-0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	97507179	97528621	9	-0.9501
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	97533310	117305056	11378	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	117306237	117306323	2	-1.8607
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	117307715	129354548	7652	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	129354948	129356767	14	-2.0582
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	129356785	133118216	1890	-0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	133118446	133118694	2	-1.1911
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	133121056	136179301	2033	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	136181288	136181612	3	-1.7963
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	136182326	219646248	50966	0.0053
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	219646832	219989218	178	0.4995
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	219990414	227050282	4757	0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	227051032	227054312	5	-1.2195
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	227056043	237855272	7012	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	237857291	237857409	2	-1.655
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	2	237858861	242738129	2788	0.0159
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	35345	6621543	5838	0.0119
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	6626128	6628332	23	-0.6128
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	6630078	164197211	97186	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	164200421	164202256	2	-2.688
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	164208853	196875861	20621	0.0092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	196884256	196960434	45	0.3974
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	196964365	199322975	1153	0.0133
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	199329613	199334102	11	-0.5181
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	3	199335622	199380515	9	0.0695
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	2281	49072	50	-0.2363
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	51775	3080693	1206	-0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	3083367	3084299	3	-1.5234
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	3084528	9066075	3987	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	9070328	9118717	15	-0.6776
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	9118985	9468995	158	-0.0271
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	9468999	9473325	3	-1.036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	9474140	9999813	584	0.0456
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	10001452	10011816	17	0.4724
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	10011844	34455449	16800	0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	34462895	34501120	38	0.4694
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	34506267	48962605	8985	0.0082
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	48985949	48986112	2	-1.5538
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	48991977	58506555	4201	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	58507135	58511567	8	-0.8461
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	58524303	61619533	1888	0.004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	61623530	61624547	2	-1.3015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	61628281	63813764	1188	-2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	63813833	63837162	8	-0.6506
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	63837433	66672472	1838	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	66674833	66678495	3	-0.8824
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	66680151	69016736	1366	0.0065
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	69021057	69187710	73	0.382
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	69188929	130282201	36490	0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	130286996	130287610	2	-2.0931
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	130292013	138311689	4519	0.0102
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	138311870	138314571	17	-0.5603
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	138327813	162166209	14833	0.0072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	162171678	162222716	43	0.5289
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	162226274	172605921	6573	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	172611459	172614285	10	1.1981
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	4	172614299	191261904	12525	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	5	68532	32137157	22360	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	5	32138488	32208250	45	0.7343
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	5	32213541	57357403	13480	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	5	57361784	57369290	32	1.201
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	5	57374114	180722926	77186	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	94661	202353	102	-0.0323
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	203265	310720	91	0.2074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	311333	5971210	4667	-0.0032
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	5978930	5979435	3	-2.6126
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	5982044	17209643	8553	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	17210737	17210837	2	-2.736
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	17210976	31394255	9010	0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	31394284	31404430	10	-1.3643
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	31417903	32712350	564	-0.0303
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	32713554	32734596	10	-0.7291
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	32758590	32783087	22	0.0519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	32783168	32783448	2	-1.4025
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	32786951	54039110	13718	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	54039189	54039814	6	1.303
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	54043307	67064983	5459	0.0118
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	67065007	67106320	58	-0.5447
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	67107923	69616807	1773	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	69616860	69617501	5	-0.7096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	69617993	77486414	5000	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	77486449	77509360	21	-0.3748
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	77509392	78283839	510	0.0188
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	78284433	78284468	2	-1.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	78291020	79028431	474	-0.0144
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	79028500	79091904	109	-0.5208
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	79095953	165218806	55795	0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	165219292	165229446	2	-1.5583
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	6	165229518	170892930	3944	0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	52911	8965190	5252	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	8965375	8968301	5	-0.9908
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	8968488	38289443	22181	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	38290010	38298689	43	-0.2953
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	38298819	54347867	11072	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	54353999	54354011	6	-1.4471
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	54360982	61794072	2199	-0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	61794166	61799709	9	-0.7004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	61818545	64206287	931	-0.0116
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	64231500	64233133	6	0.9728
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	64274563	109221013	25654	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	109221021	109241146	37	-0.281
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	109241218	115369318	3643	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	115370693	115373530	5	-0.8862
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	115373670	125832210	6384	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	125832718	125834112	13	0.8846
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	125834113	133435717	4705	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	133435735	133448593	29	0.372
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	133448607	141409593	5203	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	141416112	141434368	34	0.3716
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	7	141434442	158819765	11058	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	21254	584973	329	0.017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	585220	585875	6	0.6374
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	585892	585908	2	3.1637
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	591043	5586143	5756	0.0135
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	5586172	5591903	25	-0.6049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	5594496	7225429	1733	0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	7237790	7825095	141	-0.4531
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	7825124	8027704	58	-0.137
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	8034441	8055342	11	-0.5382
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	8055446	12278125	3252	0.0112
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	12278588	12551442	109	-0.2961
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	12572799	13647847	1045	0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	13654039	13654061	2	1.1216
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	13654135	14553939	902	0.0111
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	14554403	14554445	3	-1.1673
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	14554767	144776300	82030	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	144776340	144778164	7	-1.5035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	8	144790132	146268959	506	-0.0239
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	36587	23351805	20452	0.0083
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	23353115	23363484	8	-1.9391
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	23368488	41836811	10882	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	41882866	44054868	73	0.3977
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	44076786	44386132	46	-0.1788
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	44409324	44806024	39	0.4624
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	44813196	77192380	5355	0.0125
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	77194997	77197981	3	-0.9612
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	77202279	90005508	9422	0.0114
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	90009583	90010362	4	-0.8245
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	90011933	104158442	9463	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	104161855	104169701	11	0.6315
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	104169815	111981702	6023	0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	111985226	111985545	2	-1.2943
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	111985595	127053055	10930	0.0079
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	127065820	127073150	2	1.4085
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	9	127076014	140211215	7167	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	62759	781623	418	-0.0184
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	787490	790177	5	-0.8011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	790213	45576787	31143	0.0047
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	45613625	45632493	2	-1.5023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	45905767	48391956	671	-0.0517
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	48457816	48460633	2	2.1061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	48503408	49401207	284	0.0148
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	49402981	49402994	2	-1.8953
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	49403267	50867144	1088	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	50901582	51067077	3	1.6951
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	51119375	61028273	7088	0.0142
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	61034121	61035080	6	-0.8267
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	61035188	66976164	4022	0.0063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	66976282	66984436	28	0.3659
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	66984452	90928653	15861	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	90932947	90938010	11	-0.7289
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	10	90938070	135356694	30425	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	188510	3239144	1273	-0.02
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	3242592	3320422	7	0.5889
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	3320743	3443300	66	-0.0623
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	3444241	3445117	3	-0.9971
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	3463102	4206589	439	-0.0143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	4212705	4293105	27	0.4974
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	4303385	5743981	1484	0.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	5744656	5764916	29	-0.677
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	5764952	6064366	243	0.0119
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	6064845	6078670	8	0.656
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	6079079	20800467	10903	0.0039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	20801428	20806334	3	-1.0723
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	20806806	24398750	2687	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	24400825	24406833	6	-0.9895
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	11	24411752	134449982	69926	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	20703	736231	418	0.0031
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	739370	744290	18	-0.663
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	745615	8248774	5113	0.0092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	8253317	8269518	11	0.7349
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	8285095	30126688	15011	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	30126848	30132637	16	-0.4434
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	30134721	31160565	886	0.0103
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	31169298	31301551	93	0.5111
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	31302088	98315923	40672	0.0047
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	98315945	98322851	31	-0.3925
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	12	98322865	132288262	22761	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	13	17924949	114126499	64292	0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	18072124	19490079	187	-0.228
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	19492423	69087800	31498	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	69088121	69088431	2	-1.4901
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	69091974	73076460	2631	0.0053
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	73076604	73090732	7	-1.4429
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	73099653	105598011	20801	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	105601409	105618359	8	-0.6589
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	105618552	105632486	9	-2.174
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	105638145	105854089	103	-0.0236
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	105867070	105891789	10	-1.7772
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	105892781	105960424	34	0.0197
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	105961853	105989694	48	0.2388
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	105993576	106224218	133	-0.0138
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	106231370	106250892	21	-0.3816
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	14	106255229	106356482	69	0.1072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	18276341	18700552	68	-0.039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	18706152	18838435	30	0.5048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	18841465	18841469	5	-0.5076
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	18841576	18846926	12	0.0797
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	18846956	18887506	29	0.6069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	18906589	19103576	15	-0.0892
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	19107947	20232440	265	0.613
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	20232614	51982281	19422	0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	51987642	51988652	2	-1.9788
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	51991520	74665417	14495	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	74678296	74682829	21	-1.5378
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	74682830	82331721	4432	0.0113
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	82331742	82334554	6	-0.6074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	82338281	83612627	597	0.0215
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	83612700	83935557	214	0.5371
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	15	83939864	100286563	12432	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	777	12556360	9423	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	12556479	12556496	2	1.5795
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	12557748	19851864	4096	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	19853151	19873376	28	-0.5874
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	19874863	22338871	1293	-0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	22349475	22612021	74	-0.3603
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	22618243	32066353	5171	0.0063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	32066363	32088477	6	0.7674
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	32116247	32390507	39	-0.0659
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	32391051	32496123	22	0.2088
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	32496402	32522376	7	0.8951
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	32522392	32562740	21	0.2294
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	32562796	33149454	54	-0.0292
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	33208395	33681473	108	0.2994
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	33683586	34316538	191	-0.0162
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	34317028	34622594	174	0.4302
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	34622717	76929109	21133	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	76929941	76942502	17	0.8633
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	16	76942938	88815036	10624	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	17	526	62861727	35906	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	17	62870828	62874955	8	-0.9899
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	17	62875344	78643088	9358	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	18	1543	14396969	10141	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	18	14397179	14430584	18	-0.4166
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	18	14436236	36514418	12674	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	18	36514432	36519387	18	0.4855
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	18	36522022	61351446	17129	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	18	61351459	61360273	28	0.4026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	18	61363304	76116029	10792	0.0122
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	19	41910	48389173	20756	-0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	19	48394873	48445350	21	-0.7148
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	19	48448077	55277700	3317	-0.0097
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	19	55283926	55283936	2	-1.7121
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	19	55284049	60973882	3389	-0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	19	60974181	60978105	5	0.9938
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	19	60980753	63789666	1847	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	20	9305	1530207	1242	-0.0121
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	20	1538257	1541893	5	-0.9292
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	20	1545946	62426597	41229	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	21	9758742	9975295	36	0.3282
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	21	9975997	46921385	24374	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	14432528	22660218	4615	-0.0146
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	22660269	22667949	6	-0.971
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	22674422	22724015	19	0.6775
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	22726814	23412115	356	0.0088
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	23412515	23412534	2	-1.61
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	23417674	41047052	12323	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	41047548	41048179	2	-1.217
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	22	41052976	49581321	6224	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	108477	9332167	5147	0.0088
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	9335009	9336235	3	-1.3904
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	9344230	33952175	16183	0.0087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	33954294	33980208	24	-0.8805
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	33983346	74364148	17802	0.0091
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	74379728	74571061	96	0.4804
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	74577970	76266264	871	-0.0131
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	76270041	76440325	17	-0.5946
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	76461534	154566399	44408	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	154569169	154582692	16	-0.5451
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	X	154617249	154835548	18	0.0362
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A01_777758	Y	2710438	57427647	8590	-0.9749
