Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	61735	9844774	4941	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	9849308	9852699	2	-2.3316
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	9855588	16807224	3760	0.0082
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	16808694	16968211	48	-0.3428
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	16968374	46510353	16746	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	46512275	46513826	2	2.2662
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	46519553	48837337	1404	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	48841815	48844612	2	1.8357
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	48845481	72768916	16107	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	72768936	72811148	45	-0.6933
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	72811904	75269284	1506	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	75271072	75273866	2	1.8512
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	75273987	81888456	4276	0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	81888602	81888605	2	1.8219
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	81888667	83840989	1326	-0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	83850358	83850390	2	1.2864
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	83853651	89475255	3862	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	89477958	89478205	2	-2.0611
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	89481524	104221531	9104	0.0129
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	104221631	104303639	26	0.6023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	104307243	110220590	3588	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	110220739	110242953	35	-0.4138
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	110244998	121187015	7092	-0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	121187379	121192495	2	1.6344
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	121193600	147242596	1044	-0.0604
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	147244246	147244441	2	2.1654
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	147246903	152527809	1829	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	152529622	152590494	75	-0.8497
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	152590565	152762762	183	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	152762890	152768700	23	0.4116
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	152773905	158523671	3314	1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	158525551	158525635	2	1.6356
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	158526584	174797333	11549	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	174797385	174797448	2	1.5982
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	174797505	175418021	415	0.0093
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	175419097	175419201	2	-1.6799
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	175419477	193155792	11840	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193156279	193156332	3	1.7622
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193156348	193769084	484	0.0139
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193769321	193900816	104	-0.7386
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193901066	196885685	1960	0.0254
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	196886709	196916359	12	0.534
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	196916799	198306860	755	0.0043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	198306932	198307779	2	-2.1723
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	198311359	202567272	2868	-2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	202567553	202567786	3	1.2371
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	202568542	204198262	1080	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	204200010	204201367	4	0.8721
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	204203651	210605721	4387	0.0072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	210605902	210605970	2	-1.434
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	210606149	215491496	3376	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	215493469	215495717	3	-2.0877
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	215496139	215860609	158	-0.0169
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	215861233	215861411	2	1.7048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	215861469	226004562	6892	-0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	226006098	226007490	2	2.5528
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	226008101	249224388	16309	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	12784	13529853	10175	-0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	13534976	13537390	3	1.8644
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	13537736	34683290	13902	0.0073
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	34685280	34740799	54	0.5544
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	34741027	40990662	4636	0.0148
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	40990752	40991438	2	2.0581
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	40991806	43188963	1655	0.0123
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	43190388	43190460	2	-1.5064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	43190992	50612832	5217	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	50615426	50615523	2	1.5387
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	50616839	52754468	1510	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	52754480	52781542	39	0.6369
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	52787949	89936766	22872	0.0013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	89959761	89972681	3	1.879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	89975620	127852021	19188	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	127857046	127857946	3	1.8563
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	127858646	129638078	1028	0.004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	129638478	129640297	14	-0.5928
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	129640315	135056484	3152	0.0084
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	135056675	135056870	2	2.0366
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	135058257	159955758	15128	0.0095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	159956520	159964196	10	0.7598
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	159964516	185316676	15902	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	185316880	185320059	4	1.719
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	185325519	243089456	35399	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	60345	60499088	41263	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	60499964	60500082	2	-2.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	60500549	68746164	6550	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	68746259	68747413	14	0.7213
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	68748758	109918190	22519	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	109918869	109935968	8	-0.836
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	109942107	114654551	2915	0.0088
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	114654982	114668950	9	-0.9938
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	114669018	129762859	9253	0.0078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	129763698	129806236	52	0.4114
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	129806924	136019099	4032	-0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	136022951	136025426	2	-1.6095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	136038541	161515597	15560	-0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	161515627	161515649	2	1.7364
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	161515944	162217021	477	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	162218344	162218849	6	1.0298
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	162218869	162508268	195	-0.0132
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	162512657	162587278	43	-0.5699
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	162587567	162607212	16	0.1551
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	162613758	162625980	10	-0.6244
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	162625995	168730180	3442	-0.0142
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	168733402	168738628	2	1.8104
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	168739827	187595294	11902	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	187595378	187595713	2	2.053
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	187595740	197896118	6546	-0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	12281	10210390	5800	-0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	10223416	10231498	28	-1.5216
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	10234214	10390715	177	-0.0281
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	10392354	10400668	16	0.5445
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	10402718	34779054	16796	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	34786500	34829872	39	-0.3667
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	34829913	58249858	12714	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	58256375	58258354	6	-1.1348
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	58263251	69288142	6749	-0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	69294799	69537152	88	0.3258
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	69540025	104745571	21413	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	104751630	104751637	5	1.503
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	104751644	161873940	34355	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	161874000	161884908	22	-0.6169
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	161884919	191027923	19202	-0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	15532	12998925	10279	-0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	13005214	13014507	3	-1.7957
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	13015045	31204711	11308	-0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	31204843	31205335	2	-2.2063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	31206601	68825001	21594	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	68829033	70654072	30	-0.4745
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	70660751	150202205	49346	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	150205500	150218604	8	-0.9285
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	150223387	169371376	13306	0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	169371918	169374431	2	1.5323
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	169374849	173207353	2762	-0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	173208608	173208886	2	1.7551
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	173209000	180790320	4403	-0.0035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	149661	421317	235	-0.0316
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	422408	422736	2	2.1207
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	423014	18339933	13954	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	18340006	18340298	3	1.4137
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	18342134	19040119	584	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	19042181	19042818	3	-0.8974
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	19044702	22563888	2556	0.015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	22565090	22565127	2	-1.6217
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	22565152	29837072	4383	-0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	29837187	29850366	19	-0.6417
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	29850380	32580617	1229	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	32581838	32602107	11	-0.8423
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	32602269	69653759	21103	0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	69657055	69661241	2	2.2603
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	69662367	74591858	3166	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	74592225	74601410	10	0.6309
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	74603555	78972621	2777	-0.0105
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	78972724	79023891	75	0.25
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	79024104	103734829	15500	-0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	103737976	103738333	8	-1.0897
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	103738406	103751564	12	0.0584
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	103751877	103762061	26	-0.9893
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	103765470	171051005	44197	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	43355	155133	94	-0.023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	155194	161442	8	-0.8884
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	161517	6964024	3372	-0.0092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	6964519	6965895	2	1.8824
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	6968187	22434780	12608	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	22435472	22436487	2	-2.0526
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	22438754	26132290	2766	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	26142392	26145413	4	-2.6684
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	26147219	54386505	19679	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	54386509	54386517	5	-1.4682
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	54393488	68708511	5282	-0.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	68713923	68714319	2	-2.0259
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	68718011	91357869	13106	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	91358294	91359033	7	1.0482
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	91359336	95461268	2531	0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	95467621	95485355	13	-1.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	95488058	101135224	2812	0.0039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	101135398	101137314	2	1.73
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	101141867	104859029	2082	-0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	104863876	105183010	148	0.4193
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	105198390	109437680	2822	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	109437757	109453713	17	-0.4583
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	109453762	126044487	10033	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	126044513	126046615	16	0.5675
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	126046876	126068847	24	-0.0405
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	126069942	126070211	2	1.5951
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	126075983	142474653	10399	0.0072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	142474939	142486045	28	0.589
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	142486115	143909249	842	-0.0342
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	143909445	144066947	40	-0.7449
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	144074929	159127004	9684	-0.0084
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	31254	7171097	7817	-0.0184
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	7186632	7186646	2	2.318
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	7193821	24972187	13989	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	24974443	24984333	27	0.4653
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	24991104	32683965	5447	0.0053
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	32684025	32686619	3	1.2869
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	32687459	39246675	3582	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	39247111	39384124	53	0.6349
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	39384700	58174119	9236	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	58175659	58190274	4	-1.0856
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	58194378	58343134	118	-0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	58343334	58348997	8	0.9262
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	58349767	86858424	17252	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86860127	86861504	4	0.6785
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86861522	86864472	8	0.2887
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86864794	86871608	4	0.713
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86873359	107099159	12236	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	107099240	107101226	3	1.2849
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	107101580	107248230	93	-0.041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	107248746	107249433	2	1.6039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	107249559	112291494	3059	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	112294279	112295260	10	1.1401
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	112300281	144699157	22399	-0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	144705157	144707808	9	-1.9063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	144718989	146298155	506	-0.0299
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	46587	43635113	31381	0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	43650212	43772050	21	-0.6205
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	43776918	68183981	244	0.0751
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	68186051	68188547	8	1.4183
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	68209916	69186130	114	-0.0537
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	69186324	69695985	33	-0.4134
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	69696000	87267378	11887	0.0063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	87267699	87267793	2	1.8376
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	87274748	93609668	4452	0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	93609773	93610132	2	1.9015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	93612959	141091394	31714	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	72759	4290814	3582	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	4290838	4291016	3	2.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	4294071	57587929	34373	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	57588292	57590768	2	2.3527
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	57593097	135229141	52904	0.0032
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	135229719	135229868	2	-2.3882
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	135232654	135506704	151	-0.0709
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	198510	18940870	12747	-0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	18949072	18961178	40	-0.9067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	18961281	25219111	4970	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	25219145	25221012	2	1.7666
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	25224253	33413123	5390	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	33413884	33415151	4	1.4228
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	33417343	48929921	10345	0.0109
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	48930132	48930328	2	1.9657
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	48964733	60224835	4123	-0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	60228747	60229394	10	-0.7692
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	60231066	65204966	2384	-0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	65206017	65209264	2	1.8983
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	65211019	81284762	9072	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	81284914	81291185	8	0.8419
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	81291374	84486717	2130	0.0123
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	84487003	84493235	2	2.0347
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	84493877	84535905	27	-0.0356
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	84536635	84536918	3	1.0895
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	84541974	86305817	1210	0.0173
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	86305875	86306054	3	-2.3293
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	86315174	91830489	3567	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	91830658	91831043	2	2.7019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	91832704	134944770	31014	0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	150442	21020906	13891	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	21020948	21410089	252	-0.6879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	21415647	33386757	8770	0.0112
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	33388829	33395418	5	-1.862
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	33399053	131825359	61182	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	131825691	131825755	2	-2.2886
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	131833210	133778189	882	-0.0167
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	19026949	38071135	13550	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	38072036	38084757	16	-1.4211
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	38088330	51545054	9121	0.0079
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	51546911	51549198	2	2.1384
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	51549557	57751096	3413	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	57758270	57778380	34	-1.4095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	57789714	84101191	16909	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	84105849	84156012	45	-0.911
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	84161129	95999014	7534	0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	95999158	96012756	12	0.508
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	96012790	106022722	7196	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	106022986	106026555	2	2.099
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	106026858	115108397	6428	-0.004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	19002124	20118883	77	0.0162
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	20135224	20420239	110	-0.2519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	20422583	46809282	16625	0.0099
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	46811935	46812461	2	1.7734
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	46812738	74006707	17500	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	74006851	74020979	7	-1.4744
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	74029900	98130002	16162	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	98130052	98131892	10	0.7114
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	98131909	106715489	4703	-0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	106717356	106826112	49	0.4868
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	106826639	107285437	302	-0.0219
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	20016328	20216955	49	-0.1101
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	20231906	20578421	49	0.761
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	20581451	20581564	7	-0.7136
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	20585988	22587474	317	0.891
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	22673399	24383030	876	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	24384565	24433585	29	-0.9039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	24433948	30566902	3815	0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	30566940	30792569	58	-0.4269
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	30795789	34714123	2610	0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	34719795	34855818	73	-1.7667
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	34858010	34929751	51	-0.0362
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	34929927	34974793	53	-0.7079
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	34975436	39124015	2884	0.0093
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	39126747	39133546	5	1.2328
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	39136585	76891511	23456	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	76891627	76895775	20	0.682
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	76902179	102469040	17669	-0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	16	60777	6846092	4159	-0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	16	6846271	6851695	4	1.5741
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	16	6852187	78371608	37559	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	16	78372440	78384738	15	0.8549
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	16	78384765	90287535	10625	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	526	10888262	6416	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	10895679	10896036	2	-3.8782
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	10898819	39423057	14534	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	39423077	39430450	20	0.9665
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	39430531	44429320	2644	-0.0035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	44435454	44784678	43	0.5837
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	44784982	78628863	20635	0.0076
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	78629793	78634179	2	2.1763
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	78634300	81049726	961	-0.0233
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	18	11543	78015057	50774	0.0031
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	19	90910	52131813	24931	-0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	19	52142352	52156536	15	-0.6592
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	19	52157269	59097854	4377	-0.0115
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	20	61305	1560787	1201	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	20	1560802	1582207	40	0.8882
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	20	1590257	62956153	41211	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	21	10736871	14595744	164	-0.1607
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	21	14597032	14603577	3	1.7512
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	21	14612609	48096957	24231	0.0026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	16052528	16061342	5	-1.1795
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	16077141	24344422	4613	-0.0354
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	24350529	24396814	19	0.5833
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	24401529	39351466	10860	-0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	39363619	39375307	24	-0.4179
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	39389628	51234455	8012	-0.0135
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	168477	64084967	34466	0.0036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	64087326	64097061	4	-2.0554
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	64097771	155182354	50069	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	Y	2650438	59018259	8634	-0.7743
