Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	3208470	9767361	3824	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	9771895	9775286	2	-2.3367
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	9778175	62528216	29071	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	62530920	62531209	3	-1.2888
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	62531957	173684644	50569	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	173685720	173685824	2	-1.6842
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	173686100	182584536	5600	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	182584578	182585176	2	-1.3311
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	182585916	192035707	5642	-0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	192035944	192106629	57	-0.7668
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	192108682	192119178	4	-0.0919
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	192121603	192167439	43	-0.7708
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	192167689	228670445	22942	-0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	228672726	228672801	2	-1.907
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	228680733	232860897	3036	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	232861048	232861861	2	-1.3004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	232862486	245880329	8126	-0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	474222	242124735	131121	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	526235	111400880	59454	0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	111401559	111418658	8	-0.8405
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	111424797	199023074	46782	-0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	1043934	162346999	88870	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	162351122	162353697	5	-1.1629
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	162354274	189836143	13746	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	967233	31240468	17893	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	31240600	31241092	2	-2.2097
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	31242358	180293075	82495	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	959281	16915071	11197	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	16915215	16919251	5	-0.9618
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	16922283	22671867	3961	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	22673069	22673106	2	-1.6262
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	22673131	170745844	81179	7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	671810	68346447	35523	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	68351859	68352255	2	-2.0302
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	68355947	95299204	12955	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	95305557	95332716	13	-0.954
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	95333414	104651112	4438	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	104658558	104799302	65	0.5048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	104991317	158077879	28229	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	607667	58336673	30481	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	58338213	58352828	4	-1.0893
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	58356932	86927516	16368	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86929219	86930596	4	0.6743
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86930614	86933561	8	0.2844
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86933883	86940725	4	0.7087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	86942476	145304484	34549	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	779932	140058573	67921	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	405240	135075077	80768	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	446120	133647740	77152	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	760163	20890902	11513	-0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	20899011	21036888	40	-0.4859
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	21037066	21301356	149	-0.7742
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	21306914	116565157	54805	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	116566377	116567145	3	-1.3021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	116567773	131671419	7322	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	18348806	79275916	35150	7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	79279502	79320684	22	0.4464
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	79323308	114005560	21412	-0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	19571208	105059083	49381	0
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	21238778	99701830	44477	-0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	16	593460	87907437	40795	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	933971	78510305	36942	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	18	319586	28844334	15414	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	18	28845696	28845705	2	-1.4022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	18	28857269	75210228	27194	-0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	19	235018	63570038	23919	-0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	20	403764	61690281	37230	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	21	14269492	46503202	20571	-0.0013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	15803930	47717016	16900	-0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	3167107	99220419	38342	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	99222737	99222989	2	-1.4652
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	99224343	154558783	25372	-5e-04
