Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	3218610	9844774	3824	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	9849308	9852699	2	-2.3367
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	9855588	62755628	29068	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	62758332	62758621	3	-1.2888
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	62759369	175418021	50630	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	175419097	175419201	2	-1.6842
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	175419477	184317913	5600	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	184317955	184318553	2	-1.3311
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	184319293	193769084	5642	-0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193769321	193840006	57	-0.7668
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193842059	193852555	4	-0.0919
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193854980	193900816	43	-0.7708
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	193901066	230603822	22942	-0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	230606103	230606178	2	-1.907
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	230614110	234794274	3035	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	234794425	234795238	2	-1.3004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	1	234795863	247813706	8125	-0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	2	484222	242476062	131114	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	2212571	109918190	59449	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	109918869	109935968	8	-0.8405
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	3	109942107	197538677	46780	-0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	1053934	162127549	88875	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	162131672	162134247	5	-1.1629
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	4	162134824	188763651	13746	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	914233	31204711	17895	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	31204843	31205335	2	-2.2097
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	5	31206601	180360469	82493	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	1014281	16807092	11198	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	16807236	16811272	5	-0.9618
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	16814304	22563888	3961	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	22565090	22565127	2	-1.6262
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	6	22565152	170903919	81185	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	705284	68708511	35523	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	68713923	68714319	2	-2.0302
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	68718011	95461268	12955	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	95467621	95494780	13	-0.954
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	95495478	104863876	4439	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	104871322	105012066	65	0.5048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	7	105204081	158385118	28229	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	8	617667	145232496	81426	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	9	789932	140938752	67933	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	10	415240	135225087	80766	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	11	456120	134142530	77142	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	889902	20999635	11510	-0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	21007744	21145621	40	-0.4859
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	21145799	21410089	149	-0.7742
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	21415647	118080774	54805	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	118081994	118082762	3	-1.3021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	12	118083390	133161346	7321	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	19450806	80377915	35147	7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	80381501	80422683	22	0.4464
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	13	80425307	114987458	21411	-0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	14	20501368	105988038	49379	0
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	15	23687685	101884307	44475	-0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	16	653459	89379936	40729	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	17	987221	80917016	36942	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	18	329586	30590336	15414	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	18	30591698	30591707	2	-1.4022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	18	30603271	77109240	27191	-0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	19	284018	58878226	23919	-0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	20	455764	62219837	37233	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	21	15347621	47678774	20570	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	22	17423930	49331012	16899	-0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	3157107	99333763	38354	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	99336081	99336333	2	-1.4652
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_A02_777592	X	99337687	154905589	25377	-4e-04
