Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	51598	17062591	8827	-0.0141
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	17063449	17131650	51	-0.4357
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	17131907	72522941	34065	-0.0212
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	72528701	72535958	9	-1.0536
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	72541006	72581356	41	0.3004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	72581960	105820759	21044	-0.0243
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	105820833	105823898	15	0.7117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	105825578	110028493	2667	-0.022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	110028840	110044476	22	-0.7865
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	110046521	112491849	1955	-0.0171
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	112497488	112498697	19	0.3508
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	112498711	143560909	5252	-0.0204
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	143576984	143677127	73	0.3647
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	143681581	143987827	132	0.0644
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	143991679	147572692	1070	0.3473
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	147603260	147812010	27	-0.0541
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	147815337	151024314	1696	0.3713
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	151026302	151035324	38	-0.1903
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	151040529	167483561	11340	0.3611
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	167500598	167508390	6	-2.0495
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	167509025	185982477	12223	0.3623
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	185984183	185987992	2	-1.5483
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	185991233	187914780	1232	0.3509
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	187915106	187915150	2	-1.6033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	187918670	192714857	3287	0.3503
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	192718034	192721641	2	-1.235
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	192723639	193619565	556	0.3636
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	193622100	193622368	2	1.5299
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	193622508	194994473	894	0.3446
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	194997658	195068625	91	0.0549
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	195068695	220433291	17437	0.3678
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	220441457	220443627	2	-2.3761
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	220448757	227877792	4448	0.3625
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	227883479	227887108	5	-0.4952
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	227887154	246802698	13870	0.3678
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	246804070	246863836	34	-0.62
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	246875180	247066874	82	0.4015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	1	247069146	247191011	62	-0.07
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	2784	3180424	2250	-0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	3182004	3182752	2	1.573
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	3182859	7610722	3702	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	7610849	7637577	29	0.3056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	7653547	24455015	11944	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	24455284	24465231	20	-0.5475
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	24467063	34544573	6147	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	34552819	34590561	46	0.4985
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	34590667	36185762	1153	-0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	36189099	36189110	8	0.7305
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	36190123	78554465	28692	0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	78555584	78575410	14	-0.691
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	78579039	97282435	7268	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	97314862	97543744	31	-0.4005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	97545636	146578555	29521	-0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	146580874	146583404	24	-1.2178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	146594276	165336433	11114	-6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	165337753	165447260	63	0.3598
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	165453195	194395990	17705	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	194398549	194402043	2	2.0272
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	194410559	203605142	5195	-0.0036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	203608045	203610291	3	-1.9988
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	203612385	206836536	2123	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	206836558	206842062	2	1.0866
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	206844075	207282812	238	-0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	207283189	207284042	3	-0.675
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	207286447	208058871	522	0.0145
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	208058999	208069844	27	0.3178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	2	208069857	242738129	22125	-0.0035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	35345	131268899	82573	0.0342
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	131268976	131281425	39	0.5353
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	131281471	163706169	20108	0.0329
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	163706469	163709339	6	0.8483
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	163709432	163995351	178	0.0196
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	163995433	164106591	67	0.3893
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	164108674	174719597	6365	0.0365
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	174723329	174782887	25	0.5272
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	174783512	176563305	1272	0.037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	176563441	176563920	4	-1.9267
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	176564019	191828212	9774	0.0266
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	191828912	191829219	2	1.5179
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	191832174	193870928	1400	0.047
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	193870959	193873471	3	-0.8413
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	193875061	194356398	339	0.0575
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	194356501	194365597	22	0.6504
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	194369129	196115404	1159	0.0373
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	196115457	196123769	8	-0.5212
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	196123917	196885980	324	0.0354
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	196895127	196965419	46	0.4944
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	196967482	198054516	495	0.0443
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	198060506	198060521	2	-1.393
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	3	198061071	199380515	673	0.013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	2281	9819488	5800	-0.0205
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	9832514	9840596	28	-1.4826
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	9843312	9848395	11	-0.4609
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	9849761	10002252	168	-0.0241
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	10007416	10011816	15	0.5616
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	10011844	34467089	16809	-0.0202
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	34467147	34506267	31	0.6192
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	34506308	48843591	8969	-0.0292
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	48843679	48849526	3	-1.1567
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	48856515	64380204	7616	-0.0273
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	64380328	64390200	19	-0.6354
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	64390349	64390853	6	-2.1831
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	64399026	65626909	783	-0.0395
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	65626920	65627073	2	-1.1492
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	65629795	67785011	1398	-0.0318
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	67787085	67800980	10	-0.6511
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	67806498	70155288	1077	-0.0607
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	70155482	70313038	82	0.1908
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	70315121	70424305	88	-0.0565
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	70424450	70425368	2	-2.1458
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	70426477	119945454	29948	-0.0288
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	119949528	119953937	2	-2.158
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	119955327	172605106	32032	-0.0287
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	172605921	172614299	12	0.757
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	4	172614351	191261904	12525	-0.031
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	68532	786612	324	-0.0127
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	794695	878307	40	1.5104
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	878653	21485033	15404	-0.027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	21486957	21488195	5	-1.4745
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	21488253	41651532	12941	-0.0304
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	41651767	41652020	3	-1.4235
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	41653013	45673021	1883	-0.0247
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	45674268	45678736	2	-0.9753
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	45682845	57990534	5746	-0.0247
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	57990549	57995523	34	-0.6418
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	57995540	97512764	22705	-0.0268
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	97512922	97512981	3	1.4902
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	97517812	103879120	3674	-0.0286
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	103888272	103888503	4	1.8037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	103888948	177131055	48310	-0.0285
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	177160157	177165211	3	1.6874
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	177187571	177324583	25	-2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	177325504	177332889	4	-1.0232
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	177333474	180307129	1781	-0.022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	180311316	180350266	17	0.6483
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	5	180350517	180722926	172	-0.0224
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	94661	199283	101	0.0224
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	202353	239837	23	0.3746
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	247306	23850996	18107	-0.0303
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	23852651	23853409	2	-2.2127
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	23855711	31388802	4194	-0.0229
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	31394255	31417903	12	-1.352
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	31425326	79019608	27616	-0.028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	79025784	79091893	112	0.2176
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	6	79091904	170892930	59753	-0.0256
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	52911	38245408	27413	-0.0254
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	38246749	38353337	128	0.2257
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	38353968	54353999	11013	-0.0306
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	54354003	54354011	5	-1.2677
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	54360982	57069302	1628	-0.0201
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	57071534	57088074	3	-1.2573
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	57120410	61962948	595	-0.0545
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	62002627	62007269	11	0.6329
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	62022712	86770701	13286	-0.0252
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	86778739	86779605	2	-1.6025
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	86784824	109228480	13292	-0.0266
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	109228865	109241146	10	-0.7262
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	109241218	141406256	19977	-0.0248
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	141406463	141438576	47	-0.3553
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	141441750	143542557	1323	-0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	143548534	143681866	36	-0.6582
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	143682164	151961678	5011	-0.024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	151962395	152099641	68	0.3877
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	152105364	158811018	4602	-0.0231
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	7	158811485	158819765	8	-0.8641
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	21254	584944	328	0.1361
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	584973	585875	7	0.8101
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	585892	585908	2	3.1739
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	591043	18309434	16405	0.0892
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	18310437	18315465	4	-1.7631
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	18315667	72374919	32122	0.0832
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	72377865	72378988	7	-1.6423
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	72379055	112360670	24120	0.0834
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	112363455	112364436	10	1.0722
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	8	112369457	146268959	22927	0.0846
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	9	36587	25943110	22294	-0.0383
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	9	25943799	25943815	2	-1.8459
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	9	25944053	41975187	9037	-0.0362
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	9	42013107	42055266	4	-1.4879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	9	42055343	44409324	109	-0.117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	9	44569219	44815938	40	-0.8291
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	9	44828123	140211215	48377	-0.0236
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	62759	24415269	19236	-0.0135
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	24417680	24418060	11	0.8729
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	24418914	31286516	5045	-0.014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	31291340	31291744	10	-1.9613
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	31291785	46475717	7348	-0.0137
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	46478798	46479812	21	0.5352
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	46479827	47241036	265	-0.1128
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	47417400	47468066	4	1.06
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	47480482	51492405	1764	-0.0257
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	51500366	51573774	6	-1.4313
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	51580604	58880511	5453	-0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	58880527	58880779	3	-1.5325
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	58888501	61028273	1526	-0.0215
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	61034121	61035270	8	-0.9547
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	61035488	71021756	6663	-0.0179
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	71033151	71033187	2	-1.5711
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	71036571	84932204	9093	-0.0245
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	84937126	84937702	4	-5.1523
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	84937863	127057480	28528	-0.021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	127058623	127062933	2	-2.606
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	10	127064050	135356694	6038	-0.017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	188510	4924693	2475	-0.0314
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	4925086	4926943	7	-0.5809
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	4928581	4932281	21	-1.2967
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	4932833	36737050	23487	-0.026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	36737737	36738710	3	-1.7351
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	36740278	101099594	37344	-0.0249
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	101103070	101103174	4	1.5575
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	11	101103422	134449982	23759	-0.0255
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	20703	9525137	6201	-0.0253
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	9529176	9619559	23	-1.5004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	9626236	11113635	1046	-0.0156
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	11113977	11132799	9	-1.1143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	11143141	12944572	1368	-0.0222
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	12944757	12963397	12	-0.5625
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	12964219	24812757	7901	-0.0227
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	24819025	24835916	14	-0.4715
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	24836266	33185927	6282	-0.0235
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	33192673	33199654	29	-0.4247
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	33199726	118791640	53258	-0.0226
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	118792260	118900885	48	0.4652
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	118902073	126614400	4686	-0.0145
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	126614902	126614911	2	1.7686
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	12	126615273	132288262	4135	-0.0151
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	17924949	18737604	386	-0.022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	18737674	18740532	5	-0.9555
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	18740775	23892618	3630	-0.0165
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	23893728	23903985	5	-0.815
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	23904578	23938057	32	0.2492
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	23938099	36968370	9495	-0.0186
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	36969135	36973965	5	0.2789
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	36974267	36982757	12	0.7695
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	36986330	63122206	16380	-0.0185
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	63122793	63134693	9	-0.8713
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	13	63137564	114126499	34327	-0.0168
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	18072124	18539520	38	0.037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	18611714	19492423	151	0.46
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	19493212	25853753	4376	-0.0108
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	25853754	25853758	5	0.832
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	25854753	39603374	8492	-0.0336
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	39608272	39641992	18	-0.4101
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	39642444	40678108	749	-0.018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	40680246	40726999	14	-1.6693
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	40727099	73100484	20482	-0.0375
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	73107467	73120017	7	-0.9984
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	73126076	105598011	20786	-0.0355
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	105601409	105632486	17	0.5878
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	14	105638145	106356482	418	0.0146
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	18276341	18700552	68	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	18706152	18867572	65	0.5155
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	18867619	19787133	177	0.1212
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	19788634	20088838	112	0.7421
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	20224763	71894730	32576	-0.0205
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	71896272	71897620	2	-1.5112
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	71898049	74678566	1346	-0.0307
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	74678682	74682829	19	-1.4823
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	15	74682830	100286563	17672	-0.0192
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	777	32496123	20152	-0.0109
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	32496402	32496410	5	1.2637
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	32516775	32550875	19	0.3967
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	32562454	33004923	56	0.0327
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	33009105	33735555	117	0.3398
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	33736226	69377042	16007	-0.0213
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	69381006	69758574	233	0.2335
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	69759990	76929109	5239	-0.0212
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	76929941	76942239	15	-1.6313
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	16	76942266	88815036	10628	-0.0196
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	526	16593977	10506	-0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	16595026	16676257	12	-0.7233
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	16678885	16682253	4	0.744
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	16682509	18299671	921	-0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	18299674	18405946	27	0.8233
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	18409922	41553424	12047	-0.0085
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	41553876	42120174	150	-0.4203
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	42139835	51513455	5801	-0.0128
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	51514043	51519934	13	-0.5695
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	51520028	51521336	3	0.4563
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	51521352	51527822	13	-0.7291
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	17	51528246	78643088	15771	-0.0121
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	18	1543	50970004	32685	-0.0167
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	18	50978791	51032406	26	-0.792
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	18	51035051	56447723	3847	-0.0168
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	18	56447739	56459288	4	0.8891
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	18	56463106	63104629	4622	-0.0201
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	18	63110187	63118245	21	-0.6593
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	18	63118698	76116029	9586	-0.0143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	41910	5457659	1594	-0.0281
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	5461239	5461580	2	-2.6436
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	5461653	24248797	9632	-0.0202
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	24252658	24256797	10	-0.7123
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	24279522	56834164	13699	-0.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	56834427	56846717	11	-0.636
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	56847282	60018425	2070	-0.0265
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	60022466	60052350	14	-0.7386
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	60055336	60964869	444	-0.0156
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	60969862	60974879	6	0.8397
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	19	60978105	63789666	1847	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	20	9305	1500503	1185	0.0348
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	20	1505190	1508999	21	-0.5435
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	20	1509580	1541893	41	1.0664
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	20	1545946	62426597	41225	0.023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	21	9758742	9929066	18	-0.4893
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	21	9929227	19364525	4040	-0.0198
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	21	19370157	19370187	2	-1.9366
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	21	19370336	46921385	20346	-0.0281
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	22	14432528	36062880	14685	-0.0122
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	22	36072938	36079892	5	-1.0472
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	22	36080613	47889947	7841	-0.0196
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	22	47890260	47890539	2	1.4374
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	22	47890711	49581321	1008	-0.0217
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	X	108477	58520821	33649	0.0047
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	X	58558882	61884484	22	0.3961
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	X	61890215	69163232	3333	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	X	69167033	69213866	28	-0.3307
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	X	69214315	76353855	3109	0.0145
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	X	76388319	76440325	7	-0.9764
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	X	76461534	154835548	44437	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D05_777594	Y	2710438	57427647	8590	-0.9473
