Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	1	3208470	245880329	128983	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	2	474222	242124735	131172	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	3	526235	63664845	35379	0
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	3	63671332	63677515	5	-0.8867
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	3	63678193	199023074	70895	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	4	1043934	189836143	102645	0.0025
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	5	967233	180293075	100426	-8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	6	959281	170745844	96400	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	7	671810	111669471	56693	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	7	111671152	111675616	3	-1.2377
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	7	111675926	126692016	7977	0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	7	126692324	126692567	3	1.2201
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	7	126692698	158077879	16587	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	8	607667	145304484	81459	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	9	779932	140058573	67952	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	10	405240	9198615	6086	-0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	10	9201992	9218237	15	-0.9462
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	10	9221814	72560447	35761	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	10	72560685	72561893	2	-1.6519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	10	72563345	83826976	6559	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	10	83829873	83830119	2	-1.7331
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	10	83830522	135075077	32374	0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	11	446120	133647740	77190	0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	12	760163	117377817	67058	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	12	117378774	117421473	16	-1.0421
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	12	117428051	131671419	6790	-0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	13	18348806	35516073	10654	1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	13	35521446	35523089	3	-1.1849
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	13	35529097	114005560	45949	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	14	19571208	100749696	47684	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	14	100749749	100750161	2	-1.4528
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	14	100752149	105059083	1713	-0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	15	21238778	99701830	44485	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	16	593460	87907437	40820	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	17	933971	78164794	36773	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	17	78164984	78165222	2	1.3976
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	17	78165917	78510305	183	0.0128
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	18	319586	48927592	28064	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	18	48929153	48934175	2	-1.45
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	18	48934200	75210228	14551	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	235018	23437034	8698	0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	23437973	23447734	2	-1.5097
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	23448260	44953163	7636	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	44955753	44957988	5	-0.777
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	44958419	53767071	3706	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	53767089	53767271	2	1.0813
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	53767727	59096078	1773	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	59096275	59096288	2	-2.4317
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	19	59096990	63570038	2106	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	20	403764	61690281	37243	1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	21	14269492	46503202	20574	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	22	15803930	47717016	16909	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_D08_777658	X	3167107	154558783	63745	0.002
