Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	3208470	213240083	108193	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	213240803	213241183	2	-1.6117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	213241700	225035815	7404	-0.0031
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	225036480	225037652	2	-1.7022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	225037748	233142768	5426	-0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	233142787	233142922	2	-1.3691
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	233145561	245880329	7903	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	2	474222	242124735	131134	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	3	526235	61101861	33469	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	3	61102245	61102344	2	-2.9698
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	3	61103057	199023074	72775	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	4	1043934	189836143	102602	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	5	967233	180293075	100402	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	959281	46696008	27381	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	46698167	46698638	3	-1.1987
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	46700068	162075549	64942	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	162075891	162077148	2	-1.5976
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	162080655	170745844	4047	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	7	671810	158077879	81239	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	607667	20329836	10910	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	20329927	20330273	2	-1.6077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	20330370	73327552	28519	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	73338466	73341235	2	2.1151
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	73344943	145304484	42009	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	779932	1846893	484	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	1847508	1848045	2	-1.0336
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	1850351	2728905	831	-0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	2732771	2733254	3	-1.1437
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	2736044	118639108	54393	0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	118640979	118641120	2	-1.5063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	118641222	140058573	12223	-0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	405240	14638566	10315	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	14638746	14651094	2	-1.1949
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	14651264	15471632	539	-0.0134
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	15476371	15479451	6	-1.0807
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	15482962	135075077	69903	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	11	446120	74422243	39109	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	11	74424201	74424279	2	-1.8572
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	11	74428424	133647740	38037	-0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	12	760163	131671419	73847	0.0026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	13	18348806	90212713	41289	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	13	90215191	90218660	3	-1.1224
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	13	90218788	114005560	15305	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	14	19571208	105059083	49399	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	15	21238778	99701830	44472	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	593460	2909857	595	-0.0095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	2914417	2931471	8	-0.7235
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	2932115	50300556	16374	-0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	50300951	50303345	3	-1.1779
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	50304144	52926175	1961	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	52926455	52926544	2	-2.5509
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	52926959	87907437	21879	-0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	17	933971	78510305	36954	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	18	319586	75210228	42604	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	19	235018	63570038	23928	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	20	403764	61690281	37237	0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	21	14269492	46503202	20572	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	22	15803930	31145346	6337	-0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	22	31150366	31150480	2	-1.3759
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	22	31155944	47717016	10563	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	X	3167107	154558783	63723	0.0019
