Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	3218610	215173460	108250	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	215174180	215174560	2	-1.6117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	215175077	226969192	7403	-0.0031
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	226969857	226971029	2	-1.7022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	226971125	235076145	5425	-0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	235076164	235076299	2	-1.3691
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	235078938	240402868	3788	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	240407163	240407307	2	-1.1453
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	1	240407340	247813706	4112	0.004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	2	484222	242476062	131127	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	3	2212571	61126821	33468	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	3	61127205	61127304	2	-2.9698
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	3	61128017	197538677	72770	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	4	1053934	188763651	102607	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	5	914233	180360469	100402	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	1014281	46588049	27381	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	46590208	46590679	3	-1.1987
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	46592109	162155559	64950	0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	162155901	162157158	2	-1.5976
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	6	162160665	170903919	4047	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	7	705284	158385118	81240	7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	617667	20285556	10910	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	20285647	20285993	2	-1.6077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	20286090	73164998	28524	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	73175912	73178681	2	2.1151
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	8	73182389	145232496	42011	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	789932	1856893	484	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	1857508	1858045	2	-1.0336
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	1860351	2738905	831	-0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	2742771	2743254	3	-1.1437
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	2746044	119599287	54404	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	119601158	119601299	2	-1.5063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	9	119601401	140938752	12224	-0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	415240	14598560	10315	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	14598740	14611088	2	-1.1949
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	14611258	15431626	539	-0.0134
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	15436365	15439445	6	-1.0807
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	10	15442956	135225087	69901	1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	11	456120	74744595	39106	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	11	74746553	74746631	2	-1.8572
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	11	74750776	134142530	38030	-0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	12	889902	133161346	73842	0.0026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	13	19450806	91414712	41285	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	13	91417190	91420659	3	-1.1224
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	13	91420787	114987458	15305	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	14	20501368	105988038	49397	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	15	23687685	101884307	44470	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	653459	2969856	595	-0.0095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	2974416	2991470	8	-0.7235
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	2992114	51743055	16374	-0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	51743450	51745844	3	-1.1779
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	51746643	54368674	1961	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	54368954	54369043	2	-2.5509
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	16	54369458	89379936	21815	-0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	17	987221	80917016	36954	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	18	329586	77109240	42601	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	19	284018	58878226	23928	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	20	455764	62219837	37240	0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	21	15347621	47678774	20571	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	22	17423930	32815346	6336	-0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	22	32820366	32820480	2	-1.3759
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	22	32825944	49331012	10563	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F03_777628	X	3157107	154905589	63740	0.0019
