Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	1	3208470	120328884	67671	-0.0384
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	1	142745296	245880329	61289	0.4036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	2	474222	225539337	121361	-0.0352
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	2	225539481	225539830	3	-1.165
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	2	225542361	242124735	9745	-0.0383
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	3	526235	66527239	37441	-0.0374
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	3	66527305	66530224	4	-1.0625
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	3	66535251	199023074	68806	-0.0373
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	4	1043934	46417801	27372	-0.0354
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	4	46437406	46451689	8	-0.7812
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	4	46454273	189836143	75225	-0.0372
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	5	967233	180293075	100410	-0.0384
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	6	959281	170745844	96366	-0.0394
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	7	671810	158077879	81231	-0.0338
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	8	607667	140388517	79946	0.0472
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	8	140388890	140389266	2	-1.6332
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	8	140392771	145304484	1489	0.0521
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	9	779932	140058573	67919	-0.039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	10	405240	135075077	80803	0.2338
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	446120	3134515	933	-0.025
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	3134640	3134978	2	-1.5794
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	3136518	57543323	30508	-0.0321
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	57543421	57543615	2	-1.4452
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	57547929	90611826	17386	-0.0252
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	90613421	90613497	2	-1.7951
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	90614434	103200146	8005	-0.0315
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	103205674	103216160	9	-1.0204
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	11	103218742	133647740	20309	-0.0276
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	12	760163	131671419	73850	-0.0335
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	13	18348806	114005560	56590	-0.0352
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	14	19571208	105059083	49361	-0.0368
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	15	21238778	99701830	44473	-0.0384
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	16	593460	13705633	7536	-0.0396
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	16	13705700	13709826	2	-2.0991
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	16	13709880	69396838	21253	-0.039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	16	69403572	69763409	68	0.3955
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	16	69765229	87907437	11957	-0.0374
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	17	933971	78510305	36935	-0.0367
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	18	319586	75210228	42617	-0.0362
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	19	235018	38571840	12956	-0.0282
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	19	38576958	38581209	3	-1.1129
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	19	38582135	63570038	10965	-0.0245
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	20	403764	49786087	29169	-0.0344
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	20	49789040	49791881	6	-0.8804
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	20	49793073	61690281	8049	-0.0312
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	21	14269492	46503202	20566	-0.035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	22	15803930	41981861	12742	-0.0383
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	22	41982424	41997402	10	-0.58
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	22	41997637	47717016	4144	-0.0304
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	X	3167107	127589420	51707	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	X	127589588	127590793	3	-1.6291
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F04_777640	X	127592062	154558783	12017	1e-04
