Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	51598	88451	16	-0.7742
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	88465	16688677	8697	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	16692220	17157507	181	-0.2462
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	17158797	64338984	28460	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	64339447	64340822	2	-1.482
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	64345749	72522941	5580	0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	72528701	72535958	9	-0.7624
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	72541006	72582430	44	0.3323
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	72583526	75823432	1934	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	75827351	75827442	2	-2.0129
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	75832097	103960870	18151	0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	103960907	104069745	28	-0.3678
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	104104926	110023250	3593	0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	110025907	110029038	15	0.4935
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	110034497	110044476	18	1.1011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	110046521	143304610	7222	0.0105
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	143543612	143579717	7	0.9633
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	143580441	150822330	2789	0.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	150822391	150852862	30	-1.5144
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	150852902	174486880	16063	0.0063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	174499620	174543010	23	0.5908
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	174552170	220433291	31177	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	220441457	220443627	2	-2.8292
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	220448757	227883479	4444	-0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	227886753	227886819	2	-2.3637
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	1	227887079	247191011	14047	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	2784	27293255	19349	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	27294806	27295004	3	-1.2539
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	27295408	34544573	4737	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	34552819	34590561	45	-1.4693
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	34590667	36185727	1151	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	36185762	36190287	12	0.6735
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	36190365	52597429	11867	0.0079
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	52607972	52634799	32	0.6546
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	52634830	57177481	3306	0.0112
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	57178181	57187581	3	-1.2295
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	57191019	87141112	18702	0.0078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	87150801	87777487	201	-0.4455
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	87805782	89365022	661	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	89374870	89395525	8	-0.7897
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	89396557	89906310	161	-2.0433
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	89912071	91246621	67	-0.3907
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	91254568	106246527	6560	0.0093
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	106247145	106251789	11	-1.6653
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	106253687	129355381	13444	0.0078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	129355431	129356767	9	-0.7479
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	129356785	137700229	5011	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	137700349	137700731	3	-1.2602
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	137701755	146580874	5467	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	146580899	146583404	23	0.6944
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	146594276	154597919	4881	0.0026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	154598055	154604728	3	-1.1677
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	154608469	180121616	15619	0.0091
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	180126456	180130114	26	-0.646
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	180130133	194395990	8345	0.0087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	194398549	194402043	2	1.7398
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	194410559	228970536	21690	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	228972658	228974618	2	-2.1096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	228977100	229465250	297	0.0269
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	229467723	229468463	13	-0.5885
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	229473134	242254709	8060	-0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	242291526	242295023	3	-1.5837
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	2	242311294	242738129	163	-0.0351
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	35345	1756803	1553	-0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	1757524	1762581	6	-0.9094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	1764158	6294263	4019	0.0178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	6295342	6313515	20	0.5588
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	6313555	6621543	241	0.0621
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	6626128	6630248	25	-0.7699
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	6630371	53006803	29907	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	53006849	53013888	29	-0.5352
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	53013942	66827027	10637	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	66827089	66827580	2	-1.814
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	66827628	68828854	1395	0.0163
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	68828949	68830103	14	-1.1564
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	68831448	98519693	14876	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	98527169	98529269	2	-1.8043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	98529317	100420474	1068	-0.0085
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	100427148	100432111	38	-0.4897
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	100433654	127151738	16332	0.0108
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	127156073	127158653	3	-1.7078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	127163190	129869292	1755	-0.0032
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	129874316	129896851	14	0.5825
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	129903856	131245549	624	-0.0213
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	131246388	131288926	52	-0.8545
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	131289614	137501789	4033	-0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	137505641	137508116	2	-2.0509
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	137521231	156958157	11939	0.0103
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	156959241	156974871	29	0.5275
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	156996103	163999007	4286	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	164001275	164061374	31	0.5443
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	164062392	174663307	6345	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	174663327	174666528	3	-1.1665
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	174666915	187888832	8127	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	187895555	187898228	8	-0.9652
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	187898703	196191856	5972	0.0111
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	196192286	196196720	4	-1.117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	3	196197376	199380515	1475	-0.0215
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	2281	9819488	5797	-0.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	9823258	9844366	36	1.0341
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	9845240	9999813	170	-0.0107
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	10001452	10009766	16	-1.6563
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	10011816	34462895	16800	0.0026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	34463350	34500578	36	0.566
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	34501120	39384514	3330	0.0107
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	39385517	39389728	4	-0.9561
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	39389883	58505210	9850	0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	58505249	58506555	2	-1.5043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	58507135	58975207	267	-0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	58975980	58979874	2	-1.3265
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	58980001	64376535	3132	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	64380064	64390200	23	-0.625
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	64390349	64390853	6	-2.4883
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	64399026	70424305	3439	-0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	70424450	70425368	2	-1.9152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	70426477	77508810	4151	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	77511100	77511390	4	-1.2619
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	77511825	126364898	29656	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	126365960	126382075	12	0.5466
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	126382537	138311689	6685	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	138311870	138312864	14	-2.3009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	138314408	162099591	14762	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	162099647	162100787	11	-0.6478
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	162103713	173225799	7093	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	173225875	173226094	8	-1.4075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	173226108	176411091	1803	0.0076
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	176411659	176450184	26	0.4908
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	176452636	190530502	9952	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	190531050	190537945	10	-0.9498
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	4	190540988	191261904	324	-0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	68532	871755	355	-0.0527
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	872815	877448	8	-1.6232
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	878307	12872313	9854	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	12872375	12879650	8	-1.2554
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	12886857	17863895	3343	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	17864610	17864626	2	-1.6199
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	17865544	46306865	17220	0.0102
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	46307687	46309259	6	0.8554
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	46313969	57357403	5082	0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	57361784	57369290	32	1.1577
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	5	57374114	180722926	77161	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	94661	198861	99	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	199267	276812	42	0.3581
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	276879	18896757	14434	0.0107
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	18897736	18899695	4	-0.9438
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	18899702	21931957	2129	-0.0106
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	21936651	21939713	6	-0.8056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	21943551	29944682	5020	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	29944720	29982621	24	-0.5586
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	6	29982688	170892930	88145	0.0087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	52911	22401305	16086	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	22401997	22403012	2	-1.9543
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	22405279	54347867	22459	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	54353999	54354011	6	-1.0288
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	54360982	64181974	3135	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	64191605	64274563	12	-0.6566
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	64275592	70058374	3149	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	70061186	70064077	2	-1.935
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	70066179	126692016	33186	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	126692324	126692567	3	1.2913
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	126692698	130899248	2331	0.0103
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	130905052	130907491	4	-0.8984
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	130911299	141416729	6997	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	141416838	141452011	41	0.389
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	141454355	142156294	446	0.0271
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	142156339	142165684	27	0.7084
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	142165914	142928980	470	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	142929090	143155257	87	0.2674
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	143161902	152778571	5903	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	152778578	152778645	2	-2.1474
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	152778648	156084551	2478	0.0082
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	156085929	156086940	3	-1.0823
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	156087669	158810207	1614	-0.0129
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	7	158810254	158819765	16	-0.4036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	21254	2689341	2122	0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	2690940	2694578	8	-0.9252
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	2694593	3990713	1675	0.0122
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	3990871	3990886	2	-2.5113
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	3990969	7241751	4051	0.0186
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	7242458	7836168	143	-0.3693
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	7836261	18051548	8537	0.0073
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	18053640	18057599	5	-1.1943
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	18057637	18308771	194	0.0137
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	18309434	18310437	2	-1.6766
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	18310587	39349340	14152	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	39349482	39506122	61	0.6723
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	39507456	40891153	1075	-0.0063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	40897009	40897628	2	-1.5468
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	40902837	115700470	42781	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	115700612	115710907	37	-0.4124
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	115719873	115941099	146	-0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	115941171	115960802	11	-0.9942
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	115960855	143740979	20040	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	143746720	143746992	2	-1.9568
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	8	143747074	146268959	869	-0.0376
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	36587	5068383	5234	0.0198
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	5068409	5073017	17	-0.64
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	5074226	6685986	1125	0.0038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	6691145	6698357	7	-0.9455
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	6702314	43177963	24972	0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	43255666	43730342	40	-0.3777
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	43740182	68782801	368	0.0229
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	68782811	68822858	13	0.5046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	9	68846002	140211215	48086	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	62759	50867144	33601	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	50901582	51005035	2	1.7006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	51067077	58182861	4962	0.0176
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	58186381	58195614	34	0.3253
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	58195748	77922857	12949	0.0103
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	77927067	77927616	2	1.7704
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	77931273	80921337	2439	-0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	80953273	81229407	17	0.4696
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	81270262	81975771	246	-0.0361
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	81984157	81987058	3	-2.1005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	81987428	135079131	36632	0.004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	135079709	135079858	2	-2.0484
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	10	135082644	135356694	151	-0.0665
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	11	188510	4923972	2475	-0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	11	4924226	4933468	43	0.5146
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	11	4933483	134449982	84576	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	20703	9525137	6203	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	9529176	9606832	22	-1.3656
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	9619559	11112094	1047	0.0157
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	11113635	11132799	10	-0.7941
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	11143141	18112831	4800	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	18117967	18121995	6	-0.8002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	18124334	24383840	4177	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	24384011	24384028	2	-1.2795
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	24384142	27537259	2394	-0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	27539008	27542629	28	-0.8105
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	27548428	33192828	4178	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	33192907	33199764	26	-0.4952
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	33199809	130686668	61543	0.0098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	130698537	130699222	9	-1.8126
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	12	130699251	132288262	576	-0.0303
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	17924949	36969135	13554	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	36970036	36982757	16	0.5404
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	36986330	37950811	701	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	37955572	37956056	2	-1.551
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	37963057	56656390	11841	0.0036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	56656627	56688010	32	-0.541
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	56690970	63122206	3804	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	63122793	63134693	9	-0.9221
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	63137564	71374989	5190	0.0139
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	71375556	71378606	5	1.1533
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	71384484	93585104	14537	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	93588673	93657506	69	-0.9236
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	13	93659689	114126499	14527	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	18072124	18523326	35	-0.0648
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	18532483	19492423	154	0.2612
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	19493212	69083732	31496	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	69087800	69092220	9	-0.7121
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	69092466	73070876	2623	0.0102
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	73076460	73099668	10	-0.654
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	73100484	74877364	989	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	74879768	74883479	2	-1.5257
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	74885003	106247258	20164	0.0073
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	106248976	106249648	5	-1.4743
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	14	106250541	106356482	71	0.0193
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	18276341	18838318	96	0.0108
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	18838380	18846104	11	0.629
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	18846118	22232129	1328	0.013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	22237903	22276386	34	-0.5136
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	22278324	32501415	6343	0.014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	32507087	32645302	74	-0.6986
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	32649551	63601155	19906	0.0098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	63603995	63605440	3	-2.4287
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	15	63609587	100286563	24239	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	777	14888478	11126	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	14897340	14993185	47	-0.2979
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	14994672	31863421	8866	0.0013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	31864869	33742820	313	0.2686
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	33744302	52015518	4935	0.0098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	52026888	52027308	3	-1.0644
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	52027430	54354076	2024	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	54354095	54379898	18	0.7176
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	54379945	76929109	14498	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	76929941	76937176	13	-1.8786
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	76940641	78809960	2301	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	78810004	78810039	2	-1.9215
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	16	78810372	88815036	8324	-0.0035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	17	526	14844296	9589	0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	17	14845455	14847917	3	1.7692
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	17	14847921	18299671	1853	0.0178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	17	18299674	18399997	25	-0.9246
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	17	18405311	41518125	12026	0.0082
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	17	41518415	41644356	103	-0.3036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	17	41647500	78643088	21671	0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	18	1543	1029386	751	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	18	1036304	1036560	4	-1.6743
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	18	1037349	76116029	50027	0.0078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	41910	20535101	9070	0.0039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	20535827	20557754	11	-0.5896
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	20557851	47939365	11477	0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	47947057	48046292	40	0.5888
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	48054492	59410817	6110	0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	59414087	59433131	18	0.586
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	59445152	60039154	312	0.0125
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	60039486	60052350	4	-0.9307
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	60055336	60974181	447	0.0122
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	60974347	60974879	3	1.415
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	60978105	62719315	1252	0.0181
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	62719564	62726492	2	-1.1848
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	19	62727041	63789666	594	0.0091
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	20	9305	62426597	42465	0.0065
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	21	9758742	46921385	24409	0.0088
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	14432528	15037301	94	0.0345
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	15042742	15063416	2	1.8739
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	15244898	17052885	1115	-0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	17053357	17386984	109	0.5331
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	17404806	19792623	1521	-0.0035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	19792651	20175294	56	0.3748
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	20175355	22660218	1716	-5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	22660269	22661967	2	-2.3931
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	22662625	22674422	5	-0.601
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	22680529	22732442	22	0.5337
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	22732461	49313898	18751	0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	49319974	49319982	5	-0.9498
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	22	49320620	49581321	146	0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	X	108477	62374362	33808	0.0084
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	X	62387177	62397624	10	0.9857
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	X	62398301	154835548	50765	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F09_777680	Y	2710438	57427647	8590	-0.9701
