Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	51598	10289717	5192	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	10289796	10304359	22	-0.7787
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	10304375	12762163	1309	-0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	12764515	12849694	40	0.4741
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	12850443	16718622	2156	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	16724101	16889665	65	0.3321
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	16890117	16987299	37	-0.1372
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	17049632	17134834	66	0.3722
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	17148828	25455928	5269	-0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	25465715	25519573	28	0.5734
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	25534088	72541504	28767	0.0095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	72541524	72583721	44	-1.089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	72583736	94899289	14452	0.0065
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	94903266	94903388	4	-1.4928
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	94903395	94925438	55	-3.5626
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	94927973	95584532	509	-0.024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	95584866	95588043	3	-1.8044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	95588451	101858396	3890	-0.0087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	101860905	101873811	12	-4.6321
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	101876647	142792400	12014	0.0088
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	143183343	143183358	2	2.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	143238504	147291432	1152	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	147303148	147695830	163	-0.5804
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	147703466	150822330	1497	-0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	150822391	150853164	32	-1.519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	150853200	153927851	1765	-2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	153928595	153929981	2	-1.9247
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	153933585	164818825	7721	0.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	164818893	164819384	3	-6.1094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	164819719	194981496	20252	0.0039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	194994473	195015652	25	-1.7711
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	195015804	195082414	71	-0.9308
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	195083353	246776293	35743	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	246780491	246861912	35	-0.7971
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	246862475	247191011	146	0.0132
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	2784	1213866	822	0.0142
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	1214143	1221210	4	-1.8112
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	1227515	4183562	2161	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	4191739	4201042	36	-0.5454
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	4201387	6237505	1717	0.017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	6239265	6239673	2	1.5243
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	6239832	17080556	8082	0.0118
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	17081331	17101442	50	-0.5519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	17106018	34506375	11192	0.0106
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	34513440	34591060	59	0.5445
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	34591536	35829477	873	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	35831294	35841451	7	-1.0416
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	35850977	41091739	3943	0.0013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	41091947	41099391	23	-0.5474
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	41104737	46991545	4453	0.0142
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	46999550	47000236	3	-1.2219
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	47000277	52607972	3731	0.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52607984	52618896	20	-1.4005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52618924	52634799	11	-2.5325
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52634830	52635046	8	-1.1417
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52641453	86981712	22000	0.0117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	86982714	86990896	2	-1.7576
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	87015364	87366798	115	-0.0954
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	87367890	87367901	2	-1.6429
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	87373867	97221654	1923	0.0353
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	97229064	97240533	13	0.4711
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	97240728	97484644	26	-0.1
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	97507179	97528621	9	-0.8377
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	97533310	146580913	29527	0.0104
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	146580927	146595369	30	0.5644
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	146595458	242738129	59104	0.0101
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	35345	1893149	1689	0.0409
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	1894824	1897965	4	-2.6011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	1900064	46024712	31044	0.012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	46024840	46026717	2	-2.0903
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	46026747	62685640	10498	0.0105
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	62687722	62690900	8	-0.9746
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	62690948	67744964	3888	0.0121
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	67745054	67746800	3	-1.7073
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	67746919	69255874	1031	0.0113
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	69262908	69264242	3	-1.8798
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	69266459	116138472	25110	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	116143282	116151640	7	-2.0708
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	116151708	131243312	9254	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	131243814	131281425	48	0.497
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	131281471	163987361	20281	0.0128
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	163989224	164081794	59	0.3246
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	164081881	194360596	19195	0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	194360656	194365597	19	0.8794
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	194369129	197004093	1548	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	197006718	197010980	2	-1.6776
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	197011868	199380515	1156	-0.0177
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	2281	9066075	5245	0.0078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	9070328	9074070	3	1.4584
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	9079832	9823258	551	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	9832514	9832946	3	1.7209
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	9837881	69118207	36575	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	69118497	69118508	3	-1.7863
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	69119167	122501423	32132	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	122501918	122510581	29	-0.7807
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	122510972	137574684	8375	0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	137578497	137586512	9	-1.0377
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	137588687	138311689	486	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	138311870	138312514	12	-2.3369
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	138312851	149457764	6964	0.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	149458462	149474055	5	-1.1199
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	149474120	156813538	4372	0.0072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	156813680	156821385	16	-0.7636
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	156821399	172605921	10100	0.0111
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	172611459	172614285	10	1.7948
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	172614299	191261904	12524	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	68532	738748	308	-0.0156
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	751371	905566	59	0.6617
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	916797	165771420	102758	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	165771452	165782533	35	-0.8098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	165782628	172537403	5000	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	172538555	172545171	7	-1.1555
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	172547378	180350266	4732	-0.006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	180350517	180421549	46	0.358
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	180421709	180722926	126	-0.0092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	94661	31381682	22418	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	31388802	31404430	12	0.9868
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	31417903	32562501	511	-0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32564661	32702419	47	0.7597
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32703061	32798005	61	0.1885
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32798775	32798808	3	2.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32798923	34045977	764	0.0245
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	34046721	34050683	7	-1.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	34052564	67065007	18381	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	67065744	67105350	55	-0.6478
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	67106127	74648586	5005	0.0128
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	74648953	74658138	10	0.8396
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	74660283	77493251	1768	0.0143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	77496587	77526970	29	0.365
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	77528956	79019608	971	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	79025784	79084078	105	0.3062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	79084234	103841522	15487	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	103844669	103868742	45	0.6259
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	103868754	150684489	29743	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	150686077	150688706	3	-1.3707
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	150693517	153999063	2512	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	154002479	154003112	2	-2.305
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	154003592	165531463	8240	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	165531846	165531963	2	-2.1658
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	165532650	170892930	3711	0.017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	52911	5841392	3041	-0.0154
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	5845026	5897108	29	-0.4615
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	5898421	37735744	23948	0.0122
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	37738481	37857390	83	-0.8314
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	37857923	54347867	11447	0.0137
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	54353999	54354011	6	1.2219
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	54360982	66274674	3893	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	66278809	66282667	5	-1.7558
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	66285074	70058374	2397	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	70061186	70064077	2	-2.114
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	70066179	102136421	17941	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	102139083	102160247	16	-0.5377
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	102162515	109224909	4552	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	109224911	109241146	25	0.4551
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	109241218	126692016	10656	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	126692324	126692567	3	1.5211
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	126692698	132216425	3364	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	132218795	132220133	2	-1.8265
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	132220139	133435880	731	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	133435917	133448593	25	0.5038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	133448607	141409593	5198	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	141416112	141438377	41	0.3658
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	141438576	142154515	452	-0.0228
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	142156294	142165914	29	0.6178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	142176424	143504885	837	0.015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	143527185	143577811	13	-0.7834
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	143583246	143592888	7	0.0181
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	143601243	143697880	24	-0.72
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	143705862	154592319	7003	0.0025
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	154594196	154596325	16	-0.7055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	154597447	158819765	2674	0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	21254	585875	335	0.0341
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	585892	585908	2	3.1222
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	591043	2235234	1311	0.0224
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2242045	2246765	12	-0.9973
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2257735	2310208	104	0.0433
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2318174	2327058	2	2.3721
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2330937	25030393	20064	0.0118
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	25030439	25035821	13	0.8349
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	25035823	25047021	13	0.3915
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	25047044	33106077	5631	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	33106213	33106618	2	1.5174
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	33106945	39365832	3403	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	39366268	39443060	31	0.7448
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	39443631	112360670	42045	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	112363455	112364436	10	1.2273
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	112369457	146268959	22920	0.0047
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	36587	581967	478	-0.0257
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	582077	598659	45	-0.89
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	598683	11361745	10248	0.0178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	11365251	11365606	2	-2.8807
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	11368564	12505545	891	0.0496
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	12507282	12507596	2	-1.879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	12510329	16894047	3635	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	16894080	16896608	4	-1.1695
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	16896731	23351805	5131	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	23353115	23369719	10	0.7399
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	23370445	29081097	4341	0.0241
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	29084549	29087680	3	-1.5151
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	29090799	43255970	6569	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	43412533	43451851	4	-1.593
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	43458988	45338940	157	0.2295
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	45361386	46100378	36	-0.3332
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	46184325	65356791	23	0.2006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	65356966	65370766	2	-2.4092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	65412427	67673801	56	-0.0329
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	67675871	67678367	8	1.7574
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	67699736	71222223	1090	0.0273
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	71222312	71222317	2	-1.7411
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	71225019	80592007	6721	0.0032
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	80598412	80599100	4	-1.0622
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	80604507	89712414	6646	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	89743971	89744039	2	-1.7945
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	89747777	93434067	2682	0.0145
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	93441971	93443366	18	-0.6429
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	93443531	106400743	8537	0.0118
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	106401531	106406604	32	0.5591
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	106409700	140211215	22480	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	62759	18213969	14888	0.0043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	18225129	18239819	3	-2.0213
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	18263653	24417681	4342	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	24417682	24420936	20	-1.8438
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	24421030	25635379	803	0.0043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	25637314	25640214	2	-2.1019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	25641039	45576787	11495	0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	45613625	45632493	2	-1.6449
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	45905767	55042023	4774	0.0138
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	55049737	55127399	101	-0.7228
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	55127902	66978843	8295	0.0182
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	66978967	66984436	17	0.6299
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	66984452	108741836	26970	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	108741935	108742043	2	-1.8313
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	108742197	135356694	19312	0.0141
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	188510	25658813	18137	0.0098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	25658909	25675557	26	-0.7176
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	25678654	55119916	16463	0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	55130608	55209585	59	-1.2819
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	55210152	134449982	52392	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	20703	9510972	6189	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	9511376	9626237	32	0.7451
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	9626953	10211785	445	0.0268
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	10213104	10213449	3	-1.4143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	10219902	11122722	601	0.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11124185	11132799	5	0.9863
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11143141	11395140	129	0.0519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11395209	11444373	40	-0.4638
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11444493	27986030	11558	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	27986188	27988911	12	-0.8078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	27994727	130360320	65091	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	130362400	130382758	12	-0.9514
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	130388049	130669588	297	-0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	130669724	130708322	25	0.4059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	130708423	132288262	570	-0.0264
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	17924949	21317282	1954	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	21317414	21320360	4	-1.2661
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	21320460	36968370	11592	0.0085
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	36969135	36982757	17	0.662
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	36986330	56762950	12625	0.0131
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	56767188	56786968	17	-0.8035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	56790236	114126499	38066	0.006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	14	18072124	106231370	55462	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	14	106231444	106250892	20	0.8969
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	14	106255229	106356482	69	0.0405
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	18276341	18524300	54	0.0669
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	18525992	19566875	252	-0.3284
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	19764921	19792388	6	0.7929
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	19794591	22231830	1122	0.0124
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	22232129	22269266	33	-0.6662
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	22269689	30276545	4802	0.0172
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	30291556	30320383	11	-0.9414
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	30326829	100286563	45747	0.0106
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	777	14897340	11125	-0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	14956269	15058862	77	-0.538
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	15060428	18668594	1629	-0.03
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	18669957	18686949	6	-0.9915
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	18687279	31947984	7226	-0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	31948315	32478472	77	0.4155
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	32478500	32550875	31	0.8597
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	32562454	33618281	159	0.3441
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	33624457	53021214	5828	0.0155
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	53021655	53021837	2	-1.3496
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	53022040	54352715	1145	0.0193
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	54353890	54374147	18	-0.6999
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	54374206	76929109	14503	0.0073
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	76929941	76937176	13	-2.1223
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	76940641	88815036	10623	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	526	36528657	20859	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	36530308	36536534	7	-1.2243
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	36542729	36758677	183	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	36764438	36776021	30	-0.6517
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	36779835	41564451	2437	-0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	41568205	41719947	91	-0.306
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	41750187	42107479	48	0.5764
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	42120174	78506957	21535	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	78510305	78536974	13	-0.7022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	78541285	78643088	49	-0.0877
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	1543	27306631	16884	0.0116
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	27307002	27307723	2	-1.5996
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	27307901	31882725	2800	-0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	31883437	31889566	3	-1.7869
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	31890064	61780544	20595	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	61788031	61791104	6	-1.0849
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	61791388	76116029	10493	0.0132
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	41910	6921504	2313	-0.0234
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	6926998	6928869	5	-1.2275
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	6928996	8648027	771	-0.0293
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	8648140	8650657	2	-2.8702
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	8651858	20386516	5887	-0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	20388046	20513074	72	-0.5837
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	20513302	61893534	19108	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	61896070	61903323	5	-5.0542
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	61908640	63789666	1158	-0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	9305	15255955	11646	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	15255970	15265978	18	-0.7575
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	15270091	28034214	8376	0.0132
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	28042184	28143486	23	-0.5879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	28143576	44170842	9172	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	44174860	44175471	3	-1.6954
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	44176878	62426597	13218	0.0039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	21	9758742	43792481	22636	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	21	43795301	43797240	2	-2.6349
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	21	43798095	46921385	1765	-0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	14432528	33913169	13252	-2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	33913214	33913297	2	3.2691
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	33913907	41227226	4158	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	41229384	41264406	21	0.7707
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	41272906	43512004	1632	0.0226
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	43514470	43525089	5	-1.0889
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	43525479	47868985	3436	0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	47872695	47873421	6	-2.3766
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	47874929	49581321	1022	-0.0656
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	108477	81266294	42476	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	81282918	81288239	12	-1.2028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	81288468	81298371	20	-0.5117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	81298472	154835548	42074	0.0087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	Y	2710438	57427647	8590	-1.0478
