Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	61735	10367130	5192	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	10367209	10381772	22	-0.7787
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	10381788	12839576	1309	-0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	12841928	12927107	39	0.4834
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	12927856	16846035	2157	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	16851514	17017078	65	0.3321
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	17017530	17114712	37	-0.1372
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	17177045	17262247	66	0.3722
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	17276241	25583341	5267	-0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	25593128	25646986	28	0.5734
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	25661501	72768916	28846	0.0098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	72768936	72811133	44	-1.089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	72811148	95126701	14445	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	95130678	95130800	4	-1.4928
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	95130807	95152850	55	-3.5626
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	95155385	95811944	509	-0.024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	95812278	95815455	3	-1.8044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	95815863	102085808	3889	-0.0087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	102088317	102101223	12	-4.6321
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	102104059	144081043	12010	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	144471986	144472001	2	2.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	144527147	149024808	1151	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	149036524	149429206	163	-0.5804
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	149436842	152555706	1498	-0.0087
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	152555767	152586540	32	-1.519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	152586576	155661227	1765	-2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	155661971	155663357	2	-1.9247
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	155666961	166552201	7721	0.0109
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	166552269	166552760	3	-6.1094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	166553095	196714873	20251	0.0039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	196727850	196749029	25	-1.7711
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	196749181	196815791	71	-0.9308
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	196816730	248709670	35740	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	248713868	248795289	35	-0.7971
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	1	248795852	249224388	147	0.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	12784	1231315	822	0.0142
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	1231592	1238659	4	-1.8112
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	1244964	4205687	2161	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	4213864	4223167	36	-0.5454
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	4223512	6320054	1717	0.017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	6321814	6322222	2	1.5243
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	6322381	17217075	8080	0.0119
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	17217850	17237961	50	-0.5519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	17242537	34652871	11192	0.0106
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	34659936	34737556	59	0.5445
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	34738032	35975973	873	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	35977790	35987947	7	-1.0416
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	35997473	41238235	3943	0.0013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	41238443	41245887	23	-0.5474
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	41251233	47138041	4451	0.0142
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	47146046	47146732	3	-1.2219
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	47146773	52754468	3732	0.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52754480	52765392	20	-1.4005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52765420	52781295	11	-2.5325
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52781326	52781542	8	-1.1417
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	52787949	87128201	21996	0.0118
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	87129203	87137385	2	-1.7576
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	87161853	87513287	115	-0.0954
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	87514379	87514390	2	-1.6429
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	87520356	97857927	1920	0.0353
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	97865337	97876806	13	0.4711
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	97877001	98118212	26	-0.1
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	98140747	98162189	9	-0.8377
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	98166878	146864443	29523	0.0104
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	146864457	146878899	30	0.5644
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	2	146878988	243089456	59107	0.0101
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	60345	1918149	1688	0.0413
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	1919824	1922965	4	-2.6011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	1925064	46049708	31045	0.012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	46049836	46051713	2	-2.0903
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	46051743	62710600	10498	0.0106
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	62712682	62715860	8	-0.9746
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	62715908	67662274	3887	0.0121
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	67662364	67664110	3	-1.7073
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	67664229	69173184	1032	0.0103
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	69180218	69181552	3	-1.8798
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	69183769	114655782	25104	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	114660592	114668950	7	-2.0708
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	114669018	129760622	9254	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	129761124	129798735	48	0.497
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	129798781	162504667	20280	0.0128
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	162506530	162599100	59	0.3246
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	162599187	192877902	19196	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	192877962	192882903	19	0.8794
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	192886435	195519698	1548	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	195522321	195526583	2	-1.6776
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	3	195527471	197896118	1156	-0.0177
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	12281	9456977	5245	0.0078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	9461230	9464972	3	1.4584
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	9470734	10214160	551	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	10223416	10223848	3	1.7209
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	10228783	69435612	36578	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	69435902	69435913	3	-1.7863
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	69436572	122281973	32134	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	122282468	122291131	29	-0.7807
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	122291522	137355234	8374	0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	137359047	137367062	9	-1.0377
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	137369237	138092239	486	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	138092420	138093064	12	-2.3369
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	138093401	149238314	6967	0.0109
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	149239012	149254605	5	-1.1199
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	149254670	156594088	4372	0.0072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	156594230	156601935	16	-0.7636
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	156601949	172369346	10100	0.0111
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	172374884	172377710	10	1.7948
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	4	172377724	191027923	12523	0.0013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	15532	685748	307	-0.0157
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	698371	852566	59	0.6617
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	863797	165838842	102760	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	165838874	165849955	35	-0.8098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	165850050	172604797	4999	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	172605949	172612565	7	-1.1555
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	172614772	180417660	4733	-0.006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	180417911	180488943	46	0.358
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	5	180489103	180790320	126	-0.0092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	149661	31273703	22417	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	31280823	31296451	12	0.9868
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	31309924	32454523	511	-0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32456683	32594441	47	0.7597
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32595083	32690027	63	0.1719
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32690797	32690830	3	2.011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	32692227	33937999	762	0.0255
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	33938743	33942705	7	-1.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	33944586	67008286	18383	0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	67009023	67048629	55	-0.6478
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	67049406	74591858	5004	0.0126
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	74592225	74601410	10	0.8396
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	74603555	77436532	1768	0.0143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	77439868	77470251	29	0.365
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	77472237	78962889	971	0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	78969065	79027359	105	0.3062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	79027515	103734829	15486	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	103737976	103762049	45	0.6259
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	103762061	150642796	29749	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	150644384	150647013	3	-1.3707
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	150651824	153957370	2512	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	153960786	153961419	2	-2.305
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	153961899	165611473	8240	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	165611856	165611973	2	-2.1658
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	6	165612660	171051005	3711	0.017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	43355	5874866	3039	-0.0152
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	5878500	5930582	29	-0.4615
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	5931895	37769219	23947	0.0122
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	37771956	37890865	83	-0.8314
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	37891398	54380373	11446	0.0137
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	54386505	54386517	6	1.2219
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	54393488	66637239	3894	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	66641374	66645232	5	-1.7558
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	66647639	70420438	2397	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	70423250	70426141	2	-2.114
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	70428243	102349185	17945	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	102351847	102373011	16	-0.5377
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	102375279	109437673	4553	8e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	109437675	109453910	25	0.4551
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	109453982	126904780	10658	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	126905088	126905331	3	1.5211
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	126905462	132565885	3364	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	132568255	132569593	2	-1.8265
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	132569599	133785340	731	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	133785377	133798053	25	0.5038
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	133798067	141763124	5198	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	141769643	141791908	41	0.3658
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	141792107	142474939	452	-0.0228
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	142476719	142486345	29	0.6178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	142486495	143873952	835	0.0148
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	143896252	143946878	13	-0.7834
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	143952313	143961955	7	0.0181
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	143970310	144066947	24	-0.72
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	144074929	154961386	7004	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	154963263	154965392	16	-0.7055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	7	154966514	159127004	2674	0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	31254	595875	335	0.0341
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	595892	595908	2	3.1222
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	601043	2247827	1312	0.0221
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2254638	2259358	12	-0.9973
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2270328	2322801	104	0.0433
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2330767	2339651	2	2.3721
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	2343530	24974476	20063	0.0118
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	24974522	24979904	13	0.8349
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	24979906	24991104	13	0.3915
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	24991127	32986535	5632	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	32986671	32987076	2	1.5174
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	32987403	39246675	3403	0.0027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	39247111	39323903	31	0.7448
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	39324474	112291494	42049	0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	112294279	112295260	10	1.2273
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	8	112300281	146298155	22922	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	46587	591967	480	-0.0247
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	592077	608659	45	-0.89
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	608683	11371745	10248	0.0178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	11375251	11375606	2	-2.8807
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	11378564	12515545	891	0.0496
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	12517282	12517596	2	-1.879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	12520329	16904047	3637	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	16904080	16906608	4	-1.1695
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	16906731	23361805	5130	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	23363115	23379719	10	0.7399
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	23380445	29091097	4341	0.0241
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	29094549	29097680	3	-1.5151
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	29100799	43315974	6574	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	43472537	43511855	4	-1.593
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	43518992	45448944	157	0.2295
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	45471390	46210382	36	-0.3332
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	46294329	65616971	23	0.2006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	65617146	65630946	2	-2.4092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	65672607	68183981	57	-0.0304
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	68186051	68188547	8	1.7574
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	68209916	72032403	1090	0.0273
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	72032492	72032497	2	-1.7411
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	72035199	81402187	6721	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	81408592	81409280	4	-1.0622
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	81414687	90522594	6647	0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	90554151	90554219	2	-1.7945
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	90557957	94394246	2682	0.0145
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	94402150	94403545	18	-0.6429
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	94403710	107360922	8538	0.0117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	107361710	107366783	32	0.5591
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	9	107369879	141091394	22484	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	72759	18173963	14888	0.0043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	18185123	18199813	3	-2.0213
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	18223647	24377675	4341	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	24377676	24380930	20	-1.8438
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	24381024	25595373	803	0.0043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	25597308	25600208	2	-2.1019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	25601033	46256781	11495	0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	46293619	46312487	2	-1.6449
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	46485761	55372017	4774	0.0139
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	55379731	55457393	101	-0.7228
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	10	55457896	135506704	54594	0.0118
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	198510	25702237	18135	0.0098
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	25702333	25718981	26	-0.7176
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	25722078	55363340	16461	0.0095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	55374032	55453009	59	-1.2819
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	11	55453576	134944770	52385	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	150442	9619705	6188	0.0051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	9620109	9734970	33	0.7289
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	9735686	10320518	445	0.0268
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	10321837	10322182	3	-1.4143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	10328635	11185056	572	0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11185548	11185604	3	-0.813
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11192058	11231455	25	0.2502
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11232918	11241532	5	0.9863
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11251874	11503873	129	0.0519
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11503942	11553106	40	-0.4638
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	11553226	28094763	11556	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	28094921	28097644	12	-0.8078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	28103460	131794367	65086	0.009
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	131796447	131816805	12	-0.9514
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	131822096	132103635	297	-0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	132103771	132142369	25	0.4059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	12	132142470	133778189	570	-0.0264
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	19026949	22419282	1954	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	22419414	22422360	4	-1.2661
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	22422460	38070370	11590	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	38071135	38084757	17	0.662
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	38088330	57864949	12625	0.013
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	57869187	57888967	17	-0.8035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	13	57892235	115108397	38064	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	14	19002124	107160325	55459	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	14	107160399	107179847	20	0.8969
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	14	107184184	107285437	69	0.0405
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	20016328	20264286	54	0.0669
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	20265978	21953711	250	-0.3299
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	22042518	22291024	8	0.56
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	22293227	24680737	1122	0.0124
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	24681036	24718173	33	-0.6662
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	24718596	32489253	4803	0.0171
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	32504264	32533091	11	-0.9414
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	15	32539537	102469040	45743	0.0106
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	60777	14989839	11124	-0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	15048768	15151361	77	-0.538
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	15152927	18761093	1629	-0.03
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	18762456	18779448	6	-0.9915
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	18779778	32040483	7225	-0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	32040814	32570971	77	0.4155
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	32570999	32643374	31	0.8597
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	32654953	33710780	159	0.3441
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	33716956	54463713	5828	0.0155
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	54464154	54464336	2	-1.3496
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	54464539	55795214	1145	0.0193
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	55796389	55816646	18	-0.6999
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	55816705	78371608	14422	0.007
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	78372440	78379675	13	-2.1223
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	16	78383140	90287535	10626	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	526	39275131	20858	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	39276782	39283008	7	-1.2243
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	39289203	39505151	183	0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	39510912	39522495	30	-0.6517
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	39526309	44208674	2437	-0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	44212428	44364170	91	-0.306
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	44394412	44752300	48	0.5764
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	44764994	80913668	21536	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	80917016	80943685	13	-0.7022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	17	80947996	81049726	49	-0.0877
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	11543	29052633	16883	0.0116
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	29053004	29053725	2	-1.5996
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	29053903	33628727	2800	-0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	33629439	33635568	3	-1.7869
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	33636066	63629564	20593	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	63637051	63640124	6	-1.0849
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	18	63640408	78015057	10493	0.0132
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	90910	6970504	2313	-0.0234
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	6975998	6977869	5	-1.2275
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	6977996	8787027	771	-0.0293
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	8787140	8789657	2	-2.8702
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	8790858	20594676	5886	-0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	20596206	20721234	72	-0.5837
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	20721462	57201722	19108	-7e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	57204258	57211511	5	-5.0542
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	19	57216828	59097854	1158	-0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	61305	15307955	11649	0.0029
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	15307970	15317978	18	-0.7575
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	15322091	29420553	8376	0.0132
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	29428523	29529825	23	-0.5879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	29529915	44737435	9172	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	44741453	44742064	3	-1.6954
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	20	44743471	62956153	13218	0.0039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	21	10736871	44968053	22636	0.006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	21	44970873	44972812	2	-2.6349
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	21	44973667	48096957	1764	-0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	16052528	35583169	13251	-2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	35583214	35583297	2	3.2691
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	35583907	42897282	4158	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	42899440	42934462	21	0.7707
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	42942962	45133340	1632	0.0226
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	45135806	45146425	5	-1.0889
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	45146815	49482981	3436	0.0094
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	49486691	49487417	6	-2.3766
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	22	49488925	51234455	1023	-0.0652
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	168477	81379638	42486	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	81396262	81401583	12	-1.2028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	81401812	81411715	20	-0.5117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	X	81411816	155182354	42051	0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_F11_777666	Y	2650438	59018259	8635	-1.0473
