Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	51598	225801	27	0.1216
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	346306	346405	2	1.6598
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	394034	16888764	8753	0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	16888846	16959879	26	-0.5122
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	16961936	25455928	5349	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	25465715	25519331	26	0.6157
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	25519533	30506623	2394	0.0018
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	30509960	30512383	8	-0.883
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	30514083	35673809	2963	0.0012
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	35673941	35674976	2	-1.646
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	35675422	43190368	4273	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	43191678	43191802	2	-1.3879
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	43192292	72541504	19105	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	72541524	72583736	45	0.987
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	72584492	110029038	23716	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	110034497	110044476	18	-0.9615
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	110046521	112491849	1955	-0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	112497488	112498736	22	-1.35
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	112498764	150822330	8041	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	150822391	150853218	34	-1.2755
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	150857118	151026302	170	-0.0486
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	151028547	151035324	37	-1.1544
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	151040529	194994473	29534	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	194997658	195068407	87	-0.2637
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	195068428	227877792	21874	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	227883479	227886819	3	-2.8693
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	1	227887079	247191011	14043	0.0036
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	2784	4183562	2985	-0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	4191739	4201708	41	-0.4951
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	4201894	20681154	12530	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	20681258	20681293	2	-1.6825
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	20686700	34555087	8519	0.0043
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	34555129	34555239	3	-2.4308
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	34562136	34571478	24	-0.962
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	34571492	34590561	16	-1.9805
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	34590667	35820627	872	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	35820889	35850977	11	0.585
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	35851008	52607972	12147	0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	52607984	52635046	39	-1.5247
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	52641453	97389445	24069	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	97391786	97546012	21	-0.4465
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	97553734	106246527	5567	0.0053
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	106247145	106253687	12	-1.3188
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	106253840	154598055	28832	0.0028
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	154604221	154604728	2	-1.8352
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	154608469	241259994	53593	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	241274730	241354900	29	0.6039
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	2	241364576	242738129	592	0.0208
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	35345	68828854	47822	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	68828949	68830103	14	-1.1389
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	68831448	100417294	15939	0.0078
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	100419317	100431746	30	-0.3789
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	100431759	131245549	18736	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	131246388	131277782	45	0.4337
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	131281425	147887960	10420	0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	147888033	147896337	3	-1.2232
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	147902030	194360596	29107	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	194360656	194365597	19	-0.7148
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	194369129	196875861	1487	-0.0063
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	196884256	196960434	45	-0.5804
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	3	196964365	199380515	1172	0.0019
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	2281	7509657	4326	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	7510244	7511133	2	-1.4573
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	7511247	34455357	18478	0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	34455370	34497735	41	-0.3661
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	34500578	64376535	16584	0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	64380064	64380423	6	-1.0811
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	64386888	64390176	16	-0.2702
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	64390200	64390853	7	-2.0779
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	64399026	69057755	2880	0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	69057943	69188929	65	-0.2492
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	69204004	101395601	19227	0.0065
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	101395694	101399717	2	-1.656
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	101400855	104965020	2181	0.0135
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	104971079	104971086	5	0.8914
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	104971093	108270949	1861	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	108285200	108287696	14	-0.6662
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	108287747	108291337	8	0.0173
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	108292956	108295982	16	-0.7973
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	108296883	173225948	39560	0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	173225983	173226080	5	-1.5453
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	4	173226094	191261904	12114	0.0103
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	68532	17651360	13414	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	17658073	17675249	10	-0.9437
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	17687887	46306865	17359	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	46307687	46309259	6	-1.8624
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	46313969	49555769	32	-0.0627
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	49556670	49557349	2	1.4588
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	49561784	57357403	5046	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	57361784	57374114	33	1.1249
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	57375830	57679839	245	0.0146
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	57681959	57685055	4	-1.2351
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	57688925	151495663	57396	0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	151495677	151498544	12	-0.5888
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	151500464	155407683	2662	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	155409350	155415307	14	-1.4463
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	155427828	162781680	4921	0.0072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	162789980	162795120	4	-1.2119
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	5	162799126	180722926	11907	0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	94661	199283	101	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	202353	239837	23	-0.4837
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	247306	26813553	20144	0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	26826110	26881042	31	-0.4537
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	26881488	29944218	1431	-0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	29944454	29944682	4	-0.8943
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	29944720	29957016	15	-0.0498
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	29957080	30024465	31	-0.582
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	30024484	31388802	641	-0.0174
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	31394255	31404430	11	-1.1452
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	31417903	32688595	548	-0.0042
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	32689816	32709295	11	-0.8104
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	32710085	51000687	11537	0.0033
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	51001210	51001250	2	1.4277
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	51007232	69744419	9585	0.002
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	69744504	69748089	3	-1.1361
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	69754127	77496587	4919	0.0079
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	77496767	77508989	13	-0.7207
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	77509101	104256528	16904	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	104259993	104285410	12	-1.034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	6	104293887	170892930	43910	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	52911	6867132	3450	0.0046
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	6868245	6886805	7	-1.4588
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	6895226	22401305	12624	0.0131
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	22401997	22403012	2	-1.8786
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	22405279	26098815	2764	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	26108917	26111938	4	-2.5598
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	26113744	54347867	19686	0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	54353999	54354011	6	-1.3534
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	54360982	153549811	56307	0.0074
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	153551054	153551234	3	-1.7194
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	153553787	157433117	2712	0.0089
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	157433202	157463674	40	-0.2772
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	7	157464372	158819765	825	-0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	21254	2689341	2120	-0.004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	2690940	2691306	7	-0.9776
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	2694578	3953407	1605	0.0113
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	3953742	3955957	6	-1.049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	3957426	7181231	4089	0.0084
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	7202021	7825372	170	-0.4546
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	7836168	8091754	68	-0.1143
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	8092670	8109713	3	-1.4528
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	8124554	11986960	3221	-0.0174
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	12025135	12038532	6	-1.4876
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	12071716	28171710	12996	0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	28172718	28174049	3	-1.3413
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	28176284	39349816	6598	0.0056
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	39354760	39507456	60	0.697
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	39507936	137962652	59971	0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	137963682	137963696	2	-1.6006
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	8	137969915	146268959	4973	-0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	36587	12544856	11706	0.014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	12546594	12552294	3	1.3051
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	12555520	23351805	8732	0.0121
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	23353115	23362399	7	0.7511
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	23363484	24493816	799	-0.0156
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	24494125	24507682	19	-0.7249
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	24509684	41723631	10059	0.0124
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	41832529	41968375	8	-1.1311
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	41975187	44679040	122	0.1609
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	44688241	44719848	12	-0.5866
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	44721286	45928855	76	-0.0627
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	45928856	46026076	11	0.5515
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	46073641	105859344	25334	0.0057
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	105861635	105862177	7	-1.0244
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	9	105866182	140211215	22958	0.0035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	62759	24415269	19231	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	24417680	24418060	11	-1.7193
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	24418914	27263909	1992	0.0092
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	27265910	27268445	11	-1.0465
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	27268458	46094186	10306	0.0066
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	46111165	47926397	384	0.3735
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	47931064	66976282	12771	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	66977929	66992932	30	-0.4116
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	10	66995459	135356694	46271	0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	188510	4683016	2200	0.0084
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	4683194	4683467	5	-0.8083
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	4685710	4926943	277	-0.008
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	4928581	4933658	37	0.3822
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	4934958	5740499	781	0.026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	5743981	5765914	34	-0.4328
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	5766037	55130779	31283	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	55132599	55235453	73	0.3444
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	55235471	94824003	23762	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	94825677	94825748	2	-2.4342
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	11	94825955	134449982	28605	0.0076
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	12	20703	44190705	28503	0.0102
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	12	44192107	44195804	3	-1.261
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	12	44199559	73712158	17994	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	12	73712263	73712281	2	-2.4343
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	12	73713230	130686668	37915	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	12	130698537	130699288	13	-1.5425
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	12	130708284	132288262	572	-0.0034
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	13	17924949	22530876	2895	0.0031
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	13	22530906	22531515	9	-0.7513
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	13	22536195	48429552	18694	0.0032
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	13	48431716	48434505	2	-2.9473
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	13	48435706	114126499	42666	0.0073
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	18072124	18539520	38	-0.0086
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	18611714	19493212	152	-0.2425
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	19494766	25853743	4370	0.0262
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	25853751	25853758	7	-0.9062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	25854753	73070876	29745	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	73076460	73090732	8	-1.307
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	73099653	105950876	20951	0.0049
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	105952397	105989153	50	-0.575
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	14	105989694	106356482	224	0.044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	18276341	18676251	66	-0.0559
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	18682392	18838435	32	0.4399
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	18841465	18846971	19	-0.0269
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	18850041	20088838	305	0.5661
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	20224763	22352815	1080	0.027
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	22352888	22359121	2	-1.49
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	22359729	74665417	32837	0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	74678296	74682829	21	0.6407
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	15	74682830	100286563	17669	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	777	19851864	13513	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	19853151	19873376	28	-0.7285
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	19874863	29245159	5615	-0.0075
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	29246028	29252941	3	-1.1999
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	29254630	32021183	908	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	32021186	32496123	74	-0.2811
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	32496402	32496407	4	-3.2312
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	32496410	33735555	193	-0.2837
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	33736226	54183385	6799	0.0047
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	54183762	54184115	2	-1.8845
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	54186229	76929109	14677	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	76929941	76942266	16	-1.6863
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	76942502	87911226	10237	0.0077
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	87911543	87913062	2	-1.4678
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	16	87913474	88815036	383	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	526	16603639	10504	0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	16603776	16680995	11	-0.6921
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	16682240	18260587	921	0.0275
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	18296117	18405946	29	0.4809
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	18409922	23803180	2327	-0.0106
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	23805468	23806446	2	-2.166
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	23813398	36675234	7161	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	36676540	36684057	24	1.2371
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	36686250	41522273	2511	0.0064
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	41522318	41717786	119	-0.2665
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	41718140	74754658	19903	0.0062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	74757255	74757811	2	-2.0189
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	17	74757985	78643088	1749	-0.0011
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	18	1543	62057846	40489	0.0071
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	18	62058414	62062569	10	-0.822
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	18	62062856	69658238	5641	0.0079
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	18	69658379	69658554	2	-1.5623
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	18	69658860	76116029	4623	0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	41910	6902995	2303	-0.0017
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	6908877	6964885	44	-0.9204
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	6964950	40541162	14455	0.0032
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	40541333	40553688	22	-0.6192
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	40558584	46052012	2798	0.0035
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	46052210	46061245	15	-0.9986
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	46062587	56823610	5290	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	56823625	56840009	12	-0.8271
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	56846717	59422063	1754	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	59422081	59433131	14	-0.6326
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	19	59445152	63789666	2612	9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	20	9305	1508999	1204	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	20	1509580	1538534	39	0.9095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	20	1541849	14677869	9878	0.0068
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	20	14680313	14889584	225	-0.2777
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	20	14893737	54369135	25578	0.0088
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	20	54370686	54370950	3	-1.2719
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	20	54371163	62426597	5532	0.0053
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	21	9758742	46921385	24401	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	22	14432528	22674422	4618	-0.0228
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	22	22680529	22732321	21	-1.4062
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	22	22732442	37620866	10811	0.0059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	22	37625201	37626850	3	-2.2059
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	22	37629060	49581321	8077	3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	108477	62327127	33795	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	62327184	62422593	31	0.412
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	62433727	76247801	6291	0.0072
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	76251881	76440325	20	-0.6189
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	76461534	103058135	14173	0.0048
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	103058488	103108023	30	0.4562
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	103108037	103147844	35	-0.0226
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	103147975	103210583	56	0.4763
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	X	103215235	154835548	30137	0.0058
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_G02_777706	Y	2710438	57427647	8590	-0.8958
