Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	3208470	9767361	3820	-0.0119
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	9771895	9775286	2	-2.5269
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	9778175	62528216	29059	0.0097
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	62530920	62533000	9	-0.5514
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	62533213	88486094	16050	-0.0026
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	88487955	88490743	4	-1.5973
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	88491706	94789801	3639	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	94789968	94792493	3	-2.5683
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	94792928	192035707	42098	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	192035944	192167439	106	-0.8206
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	192167689	245880329	34092	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	474222	66719383	38644	0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	66720271	67250875	377	0.2167
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	67251476	141457820	34192	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	141463763	141622573	117	-0.4124
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	141624722	242124735	57735	0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	3	526235	199023074	106215	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	1043934	25441288	15455	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	25441487	25456356	4	-2.0236
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	25456530	162346999	73376	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	162351122	162352208	4	-1.0786
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	162353697	189836143	13749	-0.0095
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	967233	3321939	1301	-0.0466
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	3322658	3322778	2	-3.9859
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	3322938	39470106	21485	-0.0172
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	39473756	39474332	2	-1.5556
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	39475063	180293075	77588	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	6	959281	170745844	96346	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	671810	95299204	48460	-0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	95305557	95322566	12	-1.1163
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	95332716	104651112	4439	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	104658558	104991317	66	0.4634
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	104991321	158077879	28221	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	8	607667	90852947	48993	-0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	8	90856153	90955573	52	0.487
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	8	90956896	145304484	32365	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	9	779932	140058573	67892	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	405240	5179162	3089	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	5185837	5235291	42	0.414
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	5290976	134164810	77391	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134165893	134171470	5	-0.873
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134172186	134196383	11	0.0111
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134197775	134199999	3	-0.7232
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134207207	135075077	188	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	11	446120	8540679	4304	-0.0178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	11	8542191	8542204	2	-1.7724
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	11	8542528	133647740	72824	-0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	12	760163	20890902	11505	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	12	20899011	21301356	189	-0.6732
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	12	21306914	131671419	62111	0.0041
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	13	18348806	79275916	35129	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	13	79279502	79318243	21	0.4946
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	13	79320684	114005560	21404	-0.0117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	14	19571208	49373343	15140	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	14	49374094	49769618	231	0.3528
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	14	49769871	105059083	33991	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	15	21238778	99701830	44459	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	16	593460	87907437	40792	-0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	17	933971	78510305	36926	0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	18	319586	75210228	42590	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	19	235018	63570038	23906	-0.0099
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	20	403764	44329186	25540	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	20	44331148	44331297	2	-2.5418
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	20	44332537	61690281	11676	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	21	14269492	46503202	20559	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	22	15803930	40708519	12135	-0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	22	40709538	40997538	148	-0.4697
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	22	41000909	47717016	4601	-0.014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	X	3167107	154558783	63718	3e-04
