Sample	Chromosome	Start	End	Num_Probes	Segment_Mean
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	3218610	9844774	3820	-0.0119
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	9849308	9852699	2	-2.5269
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	9855588	62755628	29056	0.0097
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	62758332	62760412	9	-0.5514
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	62760625	88713506	16114	-0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	88715367	88718155	4	-1.5973
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	88719118	95017213	3639	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	95017380	95019905	3	-2.5683
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	95020340	193769084	42094	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	193769321	193900816	106	-0.8206
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	1	193901066	247813706	34090	0.0067
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	484222	66865879	38639	0.0015
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	66866767	67397371	377	0.2167
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	67397972	141741350	34187	-9e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	141747293	141906103	117	-0.4124
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	2	141908252	242476062	57738	0.0037
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	3	2212571	197538677	106209	0.0069
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	1053934	25832190	15455	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	25832389	25847258	4	-2.0236
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	25847432	162127549	73381	-3e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	162131672	162132758	4	-1.0786
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	4	162134247	188763651	13749	-0.0096
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	914233	3268939	1301	-0.0466
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	3269658	3269778	2	-3.9859
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	3269938	39434349	21487	-0.0172
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	39437999	39438575	2	-1.5556
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	5	39439306	180360469	77586	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	6	1014281	170903919	96354	0.0055
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	705284	95461268	48460	-0.0052
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	95467621	95484630	12	-1.1163
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	95494780	104863876	4440	0.0044
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	104871322	105204081	66	0.4634
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	7	105204085	158385118	28221	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	8	617667	90783810	48997	-0.0021
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	8	90787016	90886403	52	0.487
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	8	90887726	145232496	32368	5e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	9	789932	140938752	67904	0.0022
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	415240	5189162	3089	0.001
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	5195837	5245291	42	0.414
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	5300976	134314820	77389	-1e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134315903	134321480	5	-0.873
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134322196	134346393	11	0.0111
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134347785	134350009	3	-0.7232
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	10	134357217	135225087	188	2e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	11	456120	8584103	4303	-0.0178
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	11	8585615	8585628	2	-1.7724
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	11	8585952	134142530	72815	-0.003
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	12	889902	20999635	11502	0.0061
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	12	21007744	21410089	189	-0.6732
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	12	21415647	133161346	62109	0.004
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	13	19450806	80377915	35126	6e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	13	80381501	80420242	21	0.4946
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	13	80422683	114987458	21403	-0.0117
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	14	20501368	50303593	15139	0.005
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	14	50304344	50699868	231	0.3528
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	14	50700121	105988038	33990	0.0023
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	15	23687685	101884307	44457	0.0024
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	16	653459	89379936	40727	-0.0081
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	17	987221	80917016	36926	0.0016
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	18	329586	77109240	42587	-0.0014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	19	284018	58878226	23906	-0.0099
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	20	455764	44895779	25543	0.0045
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	20	44897741	44897890	2	-2.5418
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	20	44899130	62219837	11676	4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	21	15347621	47678774	20558	-4e-04
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	22	17423930	42378573	12134	-0.0054
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	22	42379592	42667594	148	-0.4697
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	22	42670965	49331012	4601	-0.014
CHEEP_p_TCGA_b120_121_SNP_N_GenomeWideSNP_6_H02_777648	X	3157107	154905589	63735	4e-04
