Chr	Start	Stop	# probes	Mean CN	CN Status	Sample
12	11365923	12253372	1215	1.418017169	loss	TCGA-AB-2813
12	12373714	15738088	3695	1.42664363	loss	TCGA-AB-2813
12	18201727	19585963	1266	1.414703776	loss	TCGA-AB-2813
16	33918783	76929109	31978	1.404079866	loss	TCGA-AB-2813
16	76938763	88815036	17689	1.414091035	loss	TCGA-AB-2813
18	1542	76116029	77948	1.443553924	loss	TCGA-AB-2813
21	9758741	17448734	3969	2.811080951	gain	TCGA-AB-2813
21	17530803	38510844	23477	2.827937038	gain	TCGA-AB-2813
21	38510843	41203026	3932	3.872123587	gain	TCGA-AB-2813
21	41204060	46921385	5902	2.847606896	gain	TCGA-AB-2813
X	108476	2713633	99	1.397162668	loss	TCGA-AB-2813
Y	2675208	26833326	8907	0.824301504	loss	TCGA-AB-2813
Y	26847503	57427647	190	1.059218335	loss	TCGA-AB-2813
4	48843590	49351352	38	2.529539907	gain	TCGA-AB-2813
5	55293052	59110568	4401	1.409320755	loss	TCGA-AB-2813
5	60652353	61273363	677	1.410909058	loss	TCGA-AB-2813
5	65481097	103534656	31901	1.411398126	loss	TCGA-AB-2813
5	103563386	180722926	76818	1.409931429	loss	TCGA-AB-2813
2	2783	49698	38	2.64634288	gain	TCGA-AB-2814
3	35344	101158	86	2.510761514	gain	TCGA-AB-2814
4	63467500	63503201	32	1.485038156	loss	TCGA-AB-2814
4	69096534	69187710	50	2.600880293	gain	TCGA-AB-2814
7	158765588	158819765	67	2.582019686	gain	TCGA-AB-2814
14	105228810	105448959	84	1.395710764	loss	TCGA-AB-2817
7	52910	125832718	115072	1.358839442	loss	TCGA-AB-2817
7	125840001	133435751	6970	1.349570179	loss	TCGA-AB-2817
7	133437685	141416630	7749	1.353668987	loss	TCGA-AB-2817
7	141441749	141694120	300	1.355429428	loss	TCGA-AB-2817
7	141712459	142154515	578	1.361785994	loss	TCGA-AB-2817
7	142167485	158819765	15984	1.359663833	loss	TCGA-AB-2817
11	188509	4924226	3804	2.662211147	gain	TCGA-AB-2820
11	4932847	5735047	1293	2.698672673	gain	TCGA-AB-2820
11	5765913	12272491	7914	2.652770742	gain	TCGA-AB-2820
11	12275464	55217259	39977	2.702650578	gain	TCGA-AB-2820
11	55360266	134449982	79527	2.694467154	gain	TCGA-AB-2820
13	17924948	114126499	99514	2.544046429	gain	TCGA-AB-2820
17	6909786	8353539	939	1.352379451	loss	TCGA-AB-2820
17	17797790	19247759	759	1.333414204	loss	TCGA-AB-2820
17	25832959	27716509	1171	1.321910956	loss	TCGA-AB-2820
2	169881409	170666169	601	1.276439359	loss	TCGA-AB-2820
2	193791947	193868741	57	1.304502763	loss	TCGA-AB-2820
2	200920772	202252321	1123	1.322254605	loss	TCGA-AB-2820
20	30543608	33519120	2149	1.318365139	loss	TCGA-AB-2820
21	15043891	15990730	1111	1.345950171	loss	TCGA-AB-2820
11	188509	5743981	5138	2.546692902	gain	TCGA-AB-2838
11	5765623	6764838	1139	2.546913566	gain	TCGA-AB-2838
11	6964299	24533814	20512	2.500991232	gain	TCGA-AB-2838
11	25688486	134449982	104317	2.505111816	gain	TCGA-AB-2838
16	28512818	32014468	1438	1.568760375	loss	TCGA-AB-2838
16	65440619	69701224	2646	1.549443341	loss	TCGA-AB-2838
16	69765228	88674457	25824	1.496922987	loss	TCGA-AB-2838
17	525	4828551	3790	1.54823557	loss	TCGA-AB-2838
17	4927204	20855227	14943	1.503943115	loss	TCGA-AB-2838
18	42619252	46945663	4737	1.508249391	loss	TCGA-AB-2838
18	52416844	52468021	34	1.386430214	loss	TCGA-AB-2838
19	19273745	19339820	38	2.56618468	gain	TCGA-AB-2838
5	64129788	122072665	52029	1.460032011	loss	TCGA-AB-2838
5	122077389	160704398	37668	1.491097918	loss	TCGA-AB-2838
7	52910	125832210	115071	1.458893935	loss	TCGA-AB-2838
7	125840001	141694120	15071	1.481568161	loss	TCGA-AB-2838
7	141715787	142154515	577	1.477338064	loss	TCGA-AB-2838
7	142165913	154058931	11081	1.474726835	loss	TCGA-AB-2838
7	154060963	158819765	4902	1.511388971	loss	TCGA-AB-2838
8	21253	15676399	23235	2.512502445	gain	TCGA-AB-2838
8	17722834	35515689	19704	2.558969512	gain	TCGA-AB-2838
8	35520920	57773684	15735	2.538981706	gain	TCGA-AB-2838
8	57778603	63486049	5802	2.522317695	gain	TCGA-AB-2838
8	63491604	73985190	9312	2.533707527	gain	TCGA-AB-2838
8	90404314	125824931	32645	2.522973407	gain	TCGA-AB-2838
8	125830345	127462217	1769	2.590759327	gain	TCGA-AB-2838
8	127463307	129714416	2807	2.556863246	gain	TCGA-AB-2838
8	129748238	131765928	1980	2.56929937	gain	TCGA-AB-2838
8	131767687	144367157	14597	2.545369322	gain	TCGA-AB-2838
8	144376006	146268959	890	2.648407278	gain	TCGA-AB-2838
16	83994351	84411542	349	2.568631618	gain	TCGA-AB-2847
19	1692835	3259096	745	2.570189975	gain	TCGA-AB-2847
19	3280808	7797692	2724	2.67492789	gain	TCGA-AB-2847
19	7812923	15902929	5659	2.589861594	gain	TCGA-AB-2847
19	15915379	16732312	641	2.621240995	gain	TCGA-AB-2847
7	102724056	104935136	2236	2.712268491	gain	TCGA-AB-2847
7	104954011	142297743	34235	2.701011907	gain	TCGA-AB-2847
7	142303492	157253524	14374	2.74061562	gain	TCGA-AB-2847
17	525	21459693	19177	1.402377739	loss	TCGA-AB-2849
5	131746943	149754035	17201	1.385469547	loss	TCGA-AB-2849
6	135555188	135767737	286	2.517950637	gain	TCGA-AB-2849
12	61314	8293101	8691	1.422447099	loss	TCGA-AB-2855
12	8486797	16164272	7986	1.439681819	loss	TCGA-AB-2855
12	16165214	30472248	15446	1.443178749	loss	TCGA-AB-2855
17	525	18991651	17657	1.417402992	loss	TCGA-AB-2855
17	26024144	27294591	826	1.424667252	loss	TCGA-AB-2855
7	38277622	38337859	140	0.599673863	loss	TCGA-AB-2855
12	61314	4504023	4812	1.547833189	loss	TCGA-AB-2857
12	10370758	19521474	9281	1.54488559	loss	TCGA-AB-2857
14	18072123	26656409	7867	1.543547628	loss	TCGA-AB-2857
14	26693721	26739376	50	1.546894707	loss	TCGA-AB-2857
17	525	653924	502	1.523616694	loss	TCGA-AB-2857
17	663599	18299671	16874	1.533815549	loss	TCGA-AB-2857
17	18405310	21464765	1769	1.540341246	loss	TCGA-AB-2857
18	1542	3989231	4411	1.542611745	loss	TCGA-AB-2857
18	10681108	16783351	3925	1.541943604	loss	TCGA-AB-2857
5	49477714	57357403	7594	1.53261996	loss	TCGA-AB-2857
5	57369049	180722926	116241	1.537940831	loss	TCGA-AB-2857
7	52910	141693787	130158	1.534879077	loss	TCGA-AB-2857
7	141704778	158819765	16614	1.520885189	loss	TCGA-AB-2857
21	38439190	39104047	994	3.29750535	gain	TCGA-AB-2860
21	39104046	44260426	6593	2.742278318	gain	TCGA-AB-2860
3	88060751	88672711	473	2.998420299	gain	TCGA-AB-2860
5	79742448	100418723	16733	1.657633426	loss	TCGA-AB-2860
5	100431937	169191469	68154	1.636796539	loss	TCGA-AB-2860
8	39375657	39475546	37	2.91374576	gain	TCGA-AB-2860
16	21513467	21746841	139	1.465989733	loss	TCGA-AB-2861
4	48788542	49315642	37	2.520351583	gain	TCGA-AB-2861
6	79025783	79091746	120	2.654150171	gain	TCGA-AB-2861
8	21253	4094020	6673	2.536123498	gain	TCGA-AB-2861
8	4100360	4153834	180	2.588964171	gain	TCGA-AB-2861
8	4154792	5063001	1997	2.533927066	gain	TCGA-AB-2861
8	5063359	16306618	15361	2.557084791	gain	TCGA-AB-2861
8	16326957	146268959	121245	2.581572295	gain	TCGA-AB-2861
9	21890123	21990770	80	1.514666316	loss	TCGA-AB-2861
8	21253	146268959	145503	2.803297775	gain	TCGA-AB-2863
17	525	7562189	6374	1.614681928	loss	TCGA-AB-2868
19	39568372	40822580	1199	1.600496619	loss	TCGA-AB-2868
19	63593063	63789666	121	3.346724977	gain	TCGA-AB-2868
20	34946061	47895399	14001	1.574479529	loss	TCGA-AB-2868
20	47909105	54655431	7989	1.571889714	loss	TCGA-AB-2868
21	14560615	15978947	1668	2.505328877	gain	TCGA-AB-2868
21	17510676	18225472	728	2.603585889	gain	TCGA-AB-2868
21	18228198	18807606	719	1.529436278	loss	TCGA-AB-2868
21	18808384	46846083	31785	2.809376537	gain	TCGA-AB-2868
21	46850221	46921385	83	3.386981249	gain	TCGA-AB-2868
22	21827673	25255782	3953	2.662903226	gain	TCGA-AB-2868
22	25257033	42972385	17907	2.672611245	gain	TCGA-AB-2868
22	42973381	49581321	7765	2.654840154	gain	TCGA-AB-2868
5	68531	4717457	5524	1.572025914	loss	TCGA-AB-2868
5	4725614	23194868	20300	1.547699086	loss	TCGA-AB-2868
5	23195162	26824888	3183	1.52414483	loss	TCGA-AB-2868
5	26833600	29528387	2230	1.512830128	loss	TCGA-AB-2868
5	29536061	30664872	985	1.497960934	loss	TCGA-AB-2868
5	30666319	52699657	17251	1.615941533	loss	TCGA-AB-2868
5	52702913	55539151	2709	1.56509475	loss	TCGA-AB-2868
5	55623912	57280414	1871	1.566587118	loss	TCGA-AB-2868
5	57290653	71008799	11358	1.555631119	loss	TCGA-AB-2868
5	71010331	82652317	11448	1.565365984	loss	TCGA-AB-2868
5	82654558	122579242	36178	1.537940831	loss	TCGA-AB-2868
5	122582081	136980906	13647	1.557384313	loss	TCGA-AB-2868
9	69231762	70706362	710	1.599365863	loss	TCGA-AB-2868
9	70708955	113319723	46521	1.56767337	loss	TCGA-AB-2868
9	113984326	120367144	7721	1.561302409	loss	TCGA-AB-2868
9	120424163	125989107	5906	1.573388561	loss	TCGA-AB-2868
9	125993199	127775437	1334	2.546692902	gain	TCGA-AB-2868
9	131799579	135255115	3351	1.635662392	loss	TCGA-AB-2868
9	137012667	139284724	1463	1.616361619	loss	TCGA-AB-2868
9	139290188	140211215	582	2.635131577	gain	TCGA-AB-2868
7	52910	17734328	19061	1.339319349	loss	TCGA-AB-2874
7	17749936	75946697	52234	1.32030844	loss	TCGA-AB-2874
7	76434839	125267673	42824	1.305700942	loss	TCGA-AB-2874
7	125275148	128127218	2716	1.311415635	loss	TCGA-AB-2874
7	128135329	133429192	4829	1.316881016	loss	TCGA-AB-2874
7	133449693	141694120	8066	1.327995262	loss	TCGA-AB-2874
7	141707820	158819765	16609	1.340015789	loss	TCGA-AB-2874
19	41909	20833900	13000	2.517950637	gain	TCGA-AB-2876
8	126303490	131191826	5475	0.915575016	loss	TCGA-AB-2876
1	79884151	100479468	20160	2.557306355	gain	TCGA-AB-2878
16	58828639	76929109	17587	1.271765473	loss	TCGA-AB-2878
16	76938763	88815036	17689	1.2671831	loss	TCGA-AB-2878
2	52592605	52634901	42	2.536563013	gain	TCGA-AB-2878
3	12271468	12872776	703	1.295379663	loss	TCGA-AB-2878
5	89953463	155404633	61993	1.287323818	loss	TCGA-AB-2878
5	155427827	157658852	2380	1.256686681	loss	TCGA-AB-2878
7	87414151	125832210	32878	1.282981173	loss	TCGA-AB-2878
7	125840001	133429192	6967	1.276771187	loss	TCGA-AB-2878
7	133459331	158819765	24687	1.276328769	loss	TCGA-AB-2878
8	15288383	39349340	26157	2.652311091	gain	TCGA-AB-2878
8	39349481	39506122	63	5.058641498	gain	TCGA-AB-2878
8	39507455	43905959	3732	2.926395983	gain	TCGA-AB-2878
8	48380442	146268959	92165	2.541402705	gain	TCGA-AB-2878
7	52910	158819765	146786	1.546316683	loss	TCGA-AB-2882
10	91662437	91719182	40	1.606448799	loss	TCGA-AB-2883
15	38407644	38486665	49	1.571481186	loss	TCGA-AB-2883
16	1308010	1408394	31	1.528244103	loss	TCGA-AB-2883
16	82917502	82953775	39	1.471172816	loss	TCGA-AB-2883
19	41946965	41991268	31	1.648752675	loss	TCGA-AB-2883
5	135138225	135190255	33	1.550786413	loss	TCGA-AB-2883
12	11558417	16490202	5520	1.483752026	loss	TCGA-AB-2885
12	17772463	27988911	10843	1.481824919	loss	TCGA-AB-2885
12	29054894	29470913	422	1.479387509	loss	TCGA-AB-2885
12	30994162	32459125	1586	1.473758363	loss	TCGA-AB-2885
12	39240312	39699334	532	1.53049677	loss	TCGA-AB-2885
12	40693945	42987886	2125	1.503031245	loss	TCGA-AB-2885
12	43496399	43917421	333	1.490710387	loss	TCGA-AB-2885
12	44040116	46638587	2391	1.498610017	loss	TCGA-AB-2885
12	61111561	63539823	2170	1.477466071	loss	TCGA-AB-2885
12	66800115	68406526	1828	1.471334222	loss	TCGA-AB-2885
12	75227245	75984260	601	1.481696534	loss	TCGA-AB-2885
12	77946027	78380234	408	1.442803672	loss	TCGA-AB-2885
12	78399148	78868599	294	1.51492881	loss	TCGA-AB-2885
12	84332301	84948866	540	1.445180807	loss	TCGA-AB-2885
12	89776622	94109967	4619	1.456746657	loss	TCGA-AB-2885
12	100219024	100814999	581	1.49770138	loss	TCGA-AB-2885
12	115861421	116241083	367	1.518476941	loss	TCGA-AB-2885
12	116569908	118370245	1971	1.456115706	loss	TCGA-AB-2885
12	118399301	118740628	335	1.551458385	loss	TCGA-AB-2885
12	121816472	124105997	1865	1.505116333	loss	TCGA-AB-2885
18	1542	64000415	63903	1.482852398	loss	TCGA-AB-2885
18	64047005	76116029	13991	1.500558953	loss	TCGA-AB-2885
3	35344	199380515	186869	1.464273549	loss	TCGA-AB-2885
5	85152023	154849271	64920	1.459273195	loss	TCGA-AB-2885
7	52910	141409593	129816	1.466624963	loss	TCGA-AB-2885
7	141441974	158819765	16924	1.463451567	loss	TCGA-AB-2885
14	106238631	106288935	49	1.426396433	loss	TCGA-AB-2887
2	34552818	34590561	47	2.908953026	gain	TCGA-AB-2887
7	73090025	141409593	59467	1.36143207	loss	TCGA-AB-2887
7	141444032	158819765	16921	1.381274448	loss	TCGA-AB-2887
12	20702	5009755	5520	2.785381616	gain	TCGA-AB-2891
13	66393529	114126499	50208	2.562185626	gain	TCGA-AB-2891
7	52910	42069264	46368	2.699608123	gain	TCGA-AB-2891
8	39418720	39503281	30	2.557306355	gain	TCGA-AB-2893
X	120692376	120729224	42	1.65175533	loss	TCGA-AB-2894
7	52910	39043922	43421	1.552130649	loss	TCGA-AB-2894
7	39048018	40100148	933	1.56035576	loss	TCGA-AB-2894
7	40107731	40813746	545	1.517556258	loss	TCGA-AB-2894
7	40823645	53423097	13439	1.545153321	loss	TCGA-AB-2894
7	53433518	67344611	7283	1.565772923	loss	TCGA-AB-2894
7	67351288	103950298	30193	1.54087518	loss	TCGA-AB-2894
7	103952134	109224909	5182	1.54488559	loss	TCGA-AB-2894
7	109228864	131541396	19144	1.528376521	loss	TCGA-AB-2894
7	131545407	141694120	9964	1.548503882	loss	TCGA-AB-2894
7	141726986	141911612	256	1.559274579	loss	TCGA-AB-2894
7	141915150	142154515	291	1.524276893	loss	TCGA-AB-2894
7	142176423	158819765	15981	1.54836972	loss	TCGA-AB-2894
10	62758	2552267	3083	2.500124605	gain	TCGA-AB-2901
21	46847677	46921385	85	2.580007036	gain	TCGA-AB-2901
8	27474663	28098029	784	2.502942242	gain	TCGA-AB-2901
1	78421905	78837244	377	1.375661005	loss	TCGA-AB-2904
1	78932873	78971575	49	1.434949535	loss	TCGA-AB-2904
1	102958207	106922696	2983	1.355899266	loss	TCGA-AB-2904
1	116020845	116136336	147	1.312324954	loss	TCGA-AB-2904
1	116138841	118083417	2060	1.377330705	loss	TCGA-AB-2904
11	188509	17491849	18498	1.379839055	loss	TCGA-AB-2904
11	17496283	22315371	6165	1.367342819	loss	TCGA-AB-2904
11	23091670	27360800	4847	1.381274448	loss	TCGA-AB-2904
11	34245816	44779428	11772	1.376137855	loss	TCGA-AB-2904
11	44882290	45857479	1101	1.339551456	loss	TCGA-AB-2904
11	45863405	47595586	922	2.505111816	gain	TCGA-AB-2904
11	47595585	49992543	1491	1.454476513	loss	TCGA-AB-2904
11	51019824	57463287	2643	3.029332632	gain	TCGA-AB-2904
11	57465561	68625610	7863	3.010754346	gain	TCGA-AB-2904
11	68633162	69580715	954	2.872884515	gain	TCGA-AB-2904
11	69593916	73209606	2749	2.950838574	gain	TCGA-AB-2904
11	73216177	75159312	1668	2.994105382	gain	TCGA-AB-2904
11	75167116	80553280	5501	3.247039646	gain	TCGA-AB-2904
11	80556652	117197248	38827	3.43515453	gain	TCGA-AB-2904
11	117203692	119275880	2021	3.493080764	gain	TCGA-AB-2904
11	119289342	122189807	3357	3.426830894	gain	TCGA-AB-2904
11	122198221	125344122	3552	3.445587512	gain	TCGA-AB-2904
11	125354671	126293244	1187	3.395796488	gain	TCGA-AB-2904
11	126298016	130260949	4483	3.484314863	gain	TCGA-AB-2904
11	130263765	130909421	940	3.424159725	gain	TCGA-AB-2904
11	130913388	134449982	4397	3.38522095	gain	TCGA-AB-2904
15	22846929	22886561	61	1.403106969	loss	TCGA-AB-2904
15	22961974	23060849	97	1.401527449	loss	TCGA-AB-2904
16	1308010	1402536	30	1.499519205	loss	TCGA-AB-2904
17	525	5292515	4096	1.451455157	loss	TCGA-AB-2904
18	12280428	18665219	3555	1.398737269	loss	TCGA-AB-2904
18	18680675	24688225	5888	1.387030969	loss	TCGA-AB-2904
18	53413939	53726106	306	1.377092052	loss	TCGA-AB-2904
18	62062340	62201260	153	1.384509545	loss	TCGA-AB-2904
18	62269865	64094264	1972	1.373636233	loss	TCGA-AB-2904
18	64099988	76116029	13884	1.384749483	loss	TCGA-AB-2904
19	15537749	15575317	41	1.47567498	loss	TCGA-AB-2904
20	4070484	4111684	34	1.522551216	loss	TCGA-AB-2904
22	42354505	42701772	397	2.53261012	gain	TCGA-AB-2904
5	105909716	107342807	1637	1.359428242	loss	TCGA-AB-2904
5	107348780	115005727	7935	1.37804691	loss	TCGA-AB-2904
5	115023679	116130853	1478	1.366040257	loss	TCGA-AB-2904
5	116133251	173618334	57651	1.366987452	loss	TCGA-AB-2904
5	173620147	180722926	6132	1.383430338	loss	TCGA-AB-2904
6	37407413	37446947	32	1.545421099	loss	TCGA-AB-2904
6	80037131	80083430	44	1.553610655	loss	TCGA-AB-2904
7	37845490	47178756	9452	1.379719506	loss	TCGA-AB-2904
7	47188617	47879416	808	1.377808134	loss	TCGA-AB-2904
7	47883976	54691821	7477	1.389436594	loss	TCGA-AB-2904
8	14586340	14621971	51	2.557749541	gain	TCGA-AB-2904
8	25602831	25713381	147	2.524066639	gain	TCGA-AB-2904
8	129341674	129388895	67	2.608553459	gain	TCGA-AB-2904
17	525	5258216	4069	1.614542032	loss	TCGA-AB-2908
17	5266511	24383218	16762	1.575980845	loss	TCGA-AB-2908
21	9758741	13389230	163	2.584033906	gain	TCGA-AB-2908
21	13389649	33714302	22161	3.306374174	gain	TCGA-AB-2908
21	36279464	46846083	12033	3.326200188	gain	TCGA-AB-2908
21	46847762	46921385	84	3.537548678	gain	TCGA-AB-2908
3	19727374	21900239	2480	1.343619836	loss	TCGA-AB-2908
3	22086226	22736149	810	1.362258035	loss	TCGA-AB-2908
3	23124731	45709822	22738	1.324662652	loss	TCGA-AB-2908
3	45710733	70118558	24993	1.319850935	loss	TCGA-AB-2908
3	70477385	73223669	3065	1.322140045	loss	TCGA-AB-2908
3	79082237	82703114	2801	1.285317697	loss	TCGA-AB-2908
3	83211858	90264774	5241	1.318936401	loss	TCGA-AB-2908
5	60563883	154661337	86255	1.324203639	loss	TCGA-AB-2908
10	26608869	26644281	39	2.553763632	gain	TCGA-AB-2910
14	39737020	39775953	46	1.494460743	loss	TCGA-AB-2910
19	2475684	2520045	32	1.644900137	loss	TCGA-AB-2910
4	171614842	171653920	31	1.41152042	loss	TCGA-AB-2910
6	110532182	110592138	34	1.544617905	loss	TCGA-AB-2910
6	135416924	135734540	400	2.768539297	gain	TCGA-AB-2910
11	117864178	119021390	917	1.421461476	loss	TCGA-AB-2911
19	18449684	18821278	173	1.378763489	loss	TCGA-AB-2911
1	51597	554636	36	1.491356328	loss	TCGA-AB-2915
10	87704377	88937041	1071	1.426149278	loss	TCGA-AB-2915
10	89107279	90687675	1719	1.461930776	loss	TCGA-AB-2915
14	100563437	100599167	34	1.566179967	loss	TCGA-AB-2915
16	776	50870	33	1.554014538	loss	TCGA-AB-2915
19	55135872	55178997	34	1.634245812	loss	TCGA-AB-2915
20	32789176	48988060	16352	1.444930398	loss	TCGA-AB-2915
20	49451717	49648347	246	1.477466071	loss	TCGA-AB-2915
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2915
4	2280	58821	67	1.514797557	loss	TCGA-AB-2915
6	79028806	79102485	123	2.806943452	gain	TCGA-AB-2915
7	141707542	158819765	16611	1.459020344	loss	TCGA-AB-2915
17	525	18229935	17366	1.52506951	loss	TCGA-AB-2917
17	18405310	19034153	251	1.531823419	loss	TCGA-AB-2917
12	10259152	13346233	3362	1.367935304	loss	TCGA-AB-2920
12	14714121	15914320	1114	1.360370852	loss	TCGA-AB-2920
12	44801155	46563980	1683	1.360135139	loss	TCGA-AB-2920
16	776	50870	33	1.430480667	loss	TCGA-AB-2920
16	82846641	88815036	6586	1.339551456	loss	TCGA-AB-2920
17	6680352	21464765	13331	1.33491696	loss	TCGA-AB-2920
17	22650293	22924053	213	1.219149458	loss	TCGA-AB-2920
17	22925564	23020228	70	0.570085416	loss	TCGA-AB-2920
17	23023117	26746745	2133	1.346183426	loss	TCGA-AB-2920
17	29037447	36232596	5971	1.342805173	loss	TCGA-AB-2920
17	37177095	38560923	918	1.337463945	loss	TCGA-AB-2920
17	43255966	43891457	517	1.349336336	loss	TCGA-AB-2920
17	57710810	58924363	726	1.380795818	loss	TCGA-AB-2920
18	1542	12772761	14548	1.327765158	loss	TCGA-AB-2920
18	12779058	12827956	53	1.295604155	loss	TCGA-AB-2920
2	20583394	20619983	42	1.500688972	loss	TCGA-AB-2920
2	34555238	34590561	42	1.486325402	loss	TCGA-AB-2920
20	9304	237362	287	1.604006417	loss	TCGA-AB-2920
20	62198358	62426597	185	1.648038562	loss	TCGA-AB-2920
X	119218526	119316936	69	0.778017764	loss	TCGA-AB-2920
X	122869923	123475159	566	0.774251941	loss	TCGA-AB-2920
X	133412129	134576271	823	0.718532342	loss	TCGA-AB-2920
5	23194308	23236274	35	1.547296844	loss	TCGA-AB-2920
5	49477714	50532586	688	1.291009843	loss	TCGA-AB-2920
5	51437336	57482196	6467	1.343503426	loss	TCGA-AB-2920
5	60207227	63830122	3094	1.324547884	loss	TCGA-AB-2920
5	68691890	71698366	1069	1.391846392	loss	TCGA-AB-2920
5	72146770	158624371	81356	1.345017552	loss	TCGA-AB-2920
7	52910	97764081	91648	1.347116853	loss	TCGA-AB-2920
7	97801652	133428969	30380	1.338971265	loss	TCGA-AB-2920
7	133456783	141699450	8063	1.358603994	loss	TCGA-AB-2920
7	141704837	142154515	591	1.347934132	loss	TCGA-AB-2920
7	142167304	158819765	15987	1.32730507	loss	TCGA-AB-2920
8	8834240	11047528	3119	2.539421716	gain	TCGA-AB-2920
8	15090689	20175096	7331	2.50902179	gain	TCGA-AB-2920
8	20176670	21242912	1529	2.517950637	gain	TCGA-AB-2920
8	21243677	26657311	5863	2.518823443	gain	TCGA-AB-2920
8	26663546	31952990	5394	2.504460747	gain	TCGA-AB-2920
8	32624668	34404107	1559	2.535684059	gain	TCGA-AB-2920
8	34404812	35452539	845	2.546913566	gain	TCGA-AB-2920
8	35458800	35515689	41	2.665442389	gain	TCGA-AB-2920
8	35523310	39452305	2892	2.538761729	gain	TCGA-AB-2920
8	40380168	53388333	7522	2.508587047	gain	TCGA-AB-2920
8	53394990	68595376	13835	2.547134249	gain	TCGA-AB-2920
8	68597741	70162194	1699	2.514026749	gain	TCGA-AB-2920
8	73054440	73985190	1084	2.513591139	gain	TCGA-AB-2920
8	73989252	96773106	19451	2.523629289	gain	TCGA-AB-2920
8	96776272	129505517	31367	2.569967295	gain	TCGA-AB-2920
8	129527667	134242181	5344	2.555755809	gain	TCGA-AB-2920
9	30909	299066	250	1.653616856	loss	TCGA-AB-2920
11	50458421	51084757	81	2.944198618	gain	TCGA-AB-2928
12	34467976	34621620	36	2.942923417	gain	TCGA-AB-2928
12	36298833	36719056	90	2.943178413	gain	TCGA-AB-2928
19	24194081	32870494	137	2.809863407	gain	TCGA-AB-2928
2	116815787	116878829	52	2.667983973	gain	TCGA-AB-2928
2	156016319	156059395	30	2.503592917	gain	TCGA-AB-2928
21	17269530	17308905	50	2.610814578	gain	TCGA-AB-2928
X	33144607	33193392	40	2.880860894	gain	TCGA-AB-2928
X	58384936	61933805	72	3.004500163	gain	TCGA-AB-2928
X	124435209	124487717	38	2.790696048	gain	TCGA-AB-2928
3	83119551	83197104	58	2.643592852	gain	TCGA-AB-2928
5	45989456	46401198	89	3.090574409	gain	TCGA-AB-2928
5	51873615	51908997	60	2.62283127	gain	TCGA-AB-2928
5	100760262	100797924	49	2.857245499	gain	TCGA-AB-2928
6	55088325	55126419	37	2.99254927	gain	TCGA-AB-2928
7	52910	57918327	62201	1.377450046	loss	TCGA-AB-2928
7	61740812	61799562	34	3.227126207	gain	TCGA-AB-2928
7	62098219	158819765	84355	1.381154775	loss	TCGA-AB-2928
8	43558070	43836825	62	3.668651847	gain	TCGA-AB-2928
8	84617498	84668866	38	2.757526977	gain	TCGA-AB-2928
8	114022491	114063994	30	2.885607344	gain	TCGA-AB-2928
12	20702	12025070	12418	1.540474712	loss	TCGA-AB-2929
12	12027274	16845400	5107	1.533549782	loss	TCGA-AB-2929
12	16855945	30125267	14023	1.543413896	loss	TCGA-AB-2929
12	30135972	36155581	4702	1.547430913	loss	TCGA-AB-2929
14	39741351	39782603	45	1.575161768	loss	TCGA-AB-2929
2	122346921	122388887	30	2.733501183	gain	TCGA-AB-2929
X	70913784	95882701	18249	1.529966432	loss	TCGA-AB-2929
X	95883788	109804825	10205	1.54181001	loss	TCGA-AB-2929
X	109815087	154835548	39335	1.532885566	loss	TCGA-AB-2929
Y	2675208	14000893	3694	NA	NA	TCGA-AB-2929
Y	14027088	57427647	5389	NA	NA	TCGA-AB-2929
7	52910	70779069	69004	1.539407307	loss	TCGA-AB-2929
7	70787394	109224993	32026	1.539140571	loss	TCGA-AB-2929
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8	21253	8832085	14283	1.552399636	loss	TCGA-AB-2929
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8	26718842	27473373	923	1.55549634	loss	TCGA-AB-2929
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9	137608033	137663232	37	1.518213831	loss	TCGA-AB-2929
17	30048422	30090107	57	1.301341855	loss	TCGA-AB-2935
18	1542	476678	480	1.637931474	loss	TCGA-AB-2935
18	696091	2265438	1739	1.561978938	loss	TCGA-AB-2935
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18	60789321	61615240	739	1.623519823	loss	TCGA-AB-2935
18	61616917	63104629	1507	1.629720996	loss	TCGA-AB-2935
21	22105133	22182219	125	1.620287697	loss	TCGA-AB-2935
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21	35622077	36276494	792	1.659501577	loss	TCGA-AB-2935
21	36276493	36749902	443	2.571526463	gain	TCGA-AB-2935
21	38133764	40289403	3000	2.505980173	gain	TCGA-AB-2935
21	41505607	46846083	5419	2.572863645	gain	TCGA-AB-2935
21	46847762	46921385	84	2.576879365	gain	TCGA-AB-2935
3	87823778	87914641	34	2.502725388	gain	TCGA-AB-2935
5	91133550	96138653	3890	1.623097876	loss	TCGA-AB-2935
5	96140248	116130853	19209	1.485295516	loss	TCGA-AB-2935
5	116133251	116450410	371	1.522560969	loss	TCGA-AB-2935
5	116455779	120834358	4350	1.490581232	loss	TCGA-AB-2935
5	120856163	122579242	1695	1.512174886	loss	TCGA-AB-2935
5	122582081	134616611	10954	1.52506951	loss	TCGA-AB-2935
5	134618048	163406081	28709	1.58105054	loss	TCGA-AB-2935
7	3296033	4038459	1006	1.648895535	loss	TCGA-AB-2935
7	4054083	4142841	105	1.627040316	loss	TCGA-AB-2935
7	4488539	13954772	10590	1.601029621	loss	TCGA-AB-2935
7	13958101	15119012	1393	1.502901023	loss	TCGA-AB-2935
7	15123405	15325992	216	1.551189561	loss	TCGA-AB-2935
7	15330901	22544557	9045	1.577483593	loss	TCGA-AB-2935
7	22551605	38437040	17668	1.644615123	loss	TCGA-AB-2935
7	40107731	41468026	1286	1.578440633	loss	TCGA-AB-2935
7	41473429	42102744	769	1.637931474	loss	TCGA-AB-2935
7	81938100	98690211	15010	1.616361619	loss	TCGA-AB-2935
7	103958658	109224336	5176	1.65662837	loss	TCGA-AB-2935
7	109240997	111170637	1755	1.570120191	loss	TCGA-AB-2935
7	111171860	111838249	684	1.647324758	loss	TCGA-AB-2935
7	112007449	120517869	6645	1.574615953	loss	TCGA-AB-2935
7	120523850	124152995	3231	1.618323468	loss	TCGA-AB-2935
7	134627328	136271040	1596	1.656054325	loss	TCGA-AB-2935
7	136277379	136486982	229	1.596181823	loss	TCGA-AB-2935
7	136493957	137262106	813	1.645470315	loss	TCGA-AB-2935
7	141727146	141775506	78	1.616221578	loss	TCGA-AB-2935
7	144118812	144365703	207	1.610211279	loss	TCGA-AB-2935
7	154496638	154582044	206	1.600980698	loss	TCGA-AB-2935
8	792841	849490	62	3.091110011	gain	TCGA-AB-2935
1	3655726	10940652	7056	1.352965451	loss	TCGA-AB-2939
1	11170823	11219086	33	1.547296844	loss	TCGA-AB-2939
1	17277086	20716832	3902	1.358133219	loss	TCGA-AB-2939
1	21036284	21387357	205	1.345716956	loss	TCGA-AB-2939
1	55781193	56463310	785	1.315512539	loss	TCGA-AB-2939
1	62369930	62778069	426	1.336537207	loss	TCGA-AB-2939
1	63024960	78816593	15678	1.333183161	loss	TCGA-AB-2939
1	82223813	89716938	7667	1.328570697	loss	TCGA-AB-2939
1	110868054	115209396	4603	1.371733289	loss	TCGA-AB-2939
1	191388177	191479833	179	1.375541818	loss	TCGA-AB-2939
1	191491717	197890156	5969	1.287658476	loss	TCGA-AB-2939
1	197966774	198505013	640	1.384269649	loss	TCGA-AB-2939
10	32577933	32624512	32	2.666828407	gain	TCGA-AB-2939
12	78446449	79660337	1025	1.317109234	loss	TCGA-AB-2939
12	80317593	82990746	2377	1.289779997	loss	TCGA-AB-2939
12	83387838	85695788	1777	1.260394182	loss	TCGA-AB-2939
12	86977301	94484759	7459	1.343619836	loss	TCGA-AB-2939
15	18276340	18754311	94	3.413200111	gain	TCGA-AB-2939
15	18801993	20061726	416	3.178563698	gain	TCGA-AB-2939
15	20232439	22717548	1946	3.523172224	gain	TCGA-AB-2939
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15	22888534	22966261	64	3.504296871	gain	TCGA-AB-2939
15	23051020	26208003	3445	3.50824621	gain	TCGA-AB-2939
15	26213582	26742014	45	2.611267037	gain	TCGA-AB-2939
15	38430309	38471072	35	1.344434994	loss	TCGA-AB-2939
5	5770373	7596652	2508	1.305859787	loss	TCGA-AB-2939
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5	94896564	98227104	2949	1.333991986	loss	TCGA-AB-2939
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7	16684014	23063084	7929	1.323744784	loss	TCGA-AB-2939
7	65073799	66207845	506	1.465354779	loss	TCGA-AB-2939
7	105073196	112168406	6955	1.335611111	loss	TCGA-AB-2939
7	126898321	133426002	5809	1.344667987	loss	TCGA-AB-2939
7	133449693	142154515	8670	1.346766742	loss	TCGA-AB-2939
7	142176423	158819765	15981	1.345600363	loss	TCGA-AB-2939
11	188509	24398682	26938	2.607875506	gain	TCGA-AB-2943
11	24404823	24544395	189	2.584929619	gain	TCGA-AB-2943
11	24547327	55132856	25869	2.610814578	gain	TCGA-AB-2943
11	55133073	55209585	57	3.229363856	gain	TCGA-AB-2943
11	55210151	134449982	79685	2.624877326	gain	TCGA-AB-2943
15	72398833	73428636	506	1.532487175	loss	TCGA-AB-2943
22	14432527	49535372	35512	2.85328726	gain	TCGA-AB-2943
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5	68072526	160589759	85501	1.510341719	loss	TCGA-AB-2943
3	129891952	130366948	306	1.578714179	loss	TCGA-AB-2944
3	170368635	170848633	564	1.590935118	loss	TCGA-AB-2944
6	79028552	79082863	98	3.009711078	gain	TCGA-AB-2944
7	52910	39520335	43941	1.602972861	loss	TCGA-AB-2944
7	39521289	158819765	102839	1.59978164	loss	TCGA-AB-2944
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2945
4	54452653	67585108	12396	2.648177821	gain	TCGA-AB-2945
4	67587189	102781526	31030	2.615795941	gain	TCGA-AB-2945
4	102786666	191261904	81081	2.634674983	gain	TCGA-AB-2945
12	11368617	16845400	6072	1.569032244	loss	TCGA-AB-2952
5	83052023	170717245	83604	1.457883057	loss	TCGA-AB-2952
7	52910	75981561	71323	1.476186498	loss	TCGA-AB-2952
7	76439520	158819765	75115	1.463874375	loss	TCGA-AB-2952
1	21295561	21356997	36	1.512699057	loss	TCGA-AB-2802
1	31293087	31442390	82	1.573661232	loss	TCGA-AB-2802
1	159166406	159284180	92	1.560626172	loss	TCGA-AB-2802
1	186518391	186564908	34	2.644280091	gain	TCGA-AB-2802
1	203389151	203448149	42	1.502380247	loss	TCGA-AB-2802
10	63532446	63575995	33	1.641056602	loss	TCGA-AB-2802
10	81744363	81801560	57	1.602139755	loss	TCGA-AB-2802
10	126438845	126571974	70	1.635378977	loss	TCGA-AB-2802
11	17027594	17187061	109	1.604640372	loss	TCGA-AB-2802
11	49477601	49538540	38	2.692133587	gain	TCGA-AB-2802
14	31691394	31740857	35	1.645042663	loss	TCGA-AB-2802
14	63821900	63990164	133	1.609095553	loss	TCGA-AB-2802
16	56661365	56718475	30	1.459779028	loss	TCGA-AB-2802
18	9018509	9061675	42	1.587492746	loss	TCGA-AB-2802
18	75166941	75223405	38	1.574888837	loss	TCGA-AB-2802
19	52304800	52384710	35	1.358957182	loss	TCGA-AB-2802
2	65233905	65288620	46	1.518608512	loss	TCGA-AB-2802
2	100549958	100589739	33	1.487613762	loss	TCGA-AB-2802
2	122069115	122159908	46	1.583920582	loss	TCGA-AB-2802
2	233634444	233684627	67	1.613143744	loss	TCGA-AB-2802
20	24729354	24779135	61	2.547796412	gain	TCGA-AB-2802
20	57362788	57409881	109	2.584481723	gain	TCGA-AB-2802
21	33746506	33803075	39	1.443053713	loss	TCGA-AB-2802
X	16541051	16672079	85	1.617482384	loss	TCGA-AB-2802
X	24980215	25055487	49	1.595766981	loss	TCGA-AB-2802
X	69904752	70180662	158	1.598811661	loss	TCGA-AB-2802
X	84337138	84384257	39	2.638101367	gain	TCGA-AB-2802
Y	7807438	7898732	81	2.682587074	gain	TCGA-AB-2802
3	98146933	98202619	36	1.657489809	loss	TCGA-AB-2802
3	99162763	99201867	38	2.562185626	gain	TCGA-AB-2802
3	129794758	129912070	80	1.62113024	loss	TCGA-AB-2802
4	186281131	186342892	43	1.510734353	loss	TCGA-AB-2802
5	43132380	43224204	67	1.559274579	loss	TCGA-AB-2802
5	132757596	132794685	46	2.586049697	gain	TCGA-AB-2802
5	141489110	141551508	52	1.5785774	loss	TCGA-AB-2802
5	159383390	159613367	180	1.641909944	loss	TCGA-AB-2802
5	172308783	172459176	85	1.625208708	loss	TCGA-AB-2802
6	86307148	86378107	38	1.550652053	loss	TCGA-AB-2802
6	114099101	114178413	116	1.576253965	loss	TCGA-AB-2802
7	693921	799511	39	1.522033381	loss	TCGA-AB-2802
7	44680215	44770565	43	1.494719735	loss	TCGA-AB-2802
7	115788277	115842764	47	1.654333386	loss	TCGA-AB-2802
8	22555955	22594371	39	2.567296635	gain	TCGA-AB-2802
8	47167017	47267052	34	2.602458215	gain	TCGA-AB-2802
8	96131776	96181455	44	1.647610243	loss	TCGA-AB-2802
8	98737401	98880310	101	1.559950229	loss	TCGA-AB-2802
9	36438207	36588625	89	1.569848133	loss	TCGA-AB-2802
9	74210592	74287210	75	1.598396135	loss	TCGA-AB-2802
9	128568448	128611807	35	1.543280175	loss	TCGA-AB-2802
1	22148644	22264354	87	2.594578166	gain	TCGA-AB-2804
1	31287071	31445850	95	2.883607887	gain	TCGA-AB-2804
1	45944434	46061896	73	2.847113486	gain	TCGA-AB-2804
1	109298835	109499033	108	2.624649908	gain	TCGA-AB-2804
1	113268237	113376637	87	2.64634288	gain	TCGA-AB-2804
1	203358352	203427210	63	2.588291309	gain	TCGA-AB-2804
1	240118469	240268921	108	2.544487317	gain	TCGA-AB-2804
10	12102964	12425499	233	2.551551923	gain	TCGA-AB-2804
10	81723001	81896249	164	2.507066041	gain	TCGA-AB-2804
11	11898281	11951340	44	1.584057824	loss	TCGA-AB-2804
11	17000004	17289774	191	2.508804409	gain	TCGA-AB-2804
11	18340024	18666093	210	2.507717788	gain	TCGA-AB-2804
11	48690200	48921309	62	2.706399846	gain	TCGA-AB-2804
12	2813902	2959018	99	2.726405215	gain	TCGA-AB-2804
15	73490998	73709297	71	2.749892078	gain	TCGA-AB-2804
15	91068698	91205824	92	2.57442457	gain	TCGA-AB-2804
16	24538207	24620500	60	2.746558461	gain	TCGA-AB-2804
17	24638453	24836351	116	2.650932618	gain	TCGA-AB-2804
18	11907409	11945684	37	2.904398629	gain	TCGA-AB-2804
18	18901288	18986222	68	2.559301296	gain	TCGA-AB-2804
2	42515579	42692657	106	2.688869988	gain	TCGA-AB-2804
2	65225160	65320247	68	2.554206204	gain	TCGA-AB-2804
2	122036142	122214550	111	2.508369704	gain	TCGA-AB-2804
2	241985778	242030806	30	2.718620923	gain	TCGA-AB-2804
20	1508287	1546336	58	1.542879082	loss	TCGA-AB-2804
20	4884525	5025077	132	2.579783505	gain	TCGA-AB-2804
20	30761178	30796350	30	3.069492192	gain	TCGA-AB-2804
21	10106551	13322885	36	2.705227641	gain	TCGA-AB-2804
22	27419249	27635343	159	2.649784438	gain	TCGA-AB-2804
22	34772067	34842186	64	2.804026531	gain	TCGA-AB-2804
X	108476	502074	57	2.557971163	gain	TCGA-AB-2804
X	58355463	58520682	42	2.535244697	gain	TCGA-AB-2804
3	47678839	47837583	86	2.901150221	gain	TCGA-AB-2804
3	90370650	95010149	35	2.556198726	gain	TCGA-AB-2804
3	110480047	110649536	121	2.563962213	gain	TCGA-AB-2804
3	130303184	130457808	67	2.684679746	gain	TCGA-AB-2804
3	134729660	134786342	60	2.533707527	gain	TCGA-AB-2804
3	140054611	140102222	45	2.697971297	gain	TCGA-AB-2804
3	178388714	178564213	94	2.512284762	gain	TCGA-AB-2804
3	187919297	188004367	107	2.640845682	gain	TCGA-AB-2804
4	57265006	57580076	282	2.501424659	gain	TCGA-AB-2804
4	129118957	129277942	83	2.604714051	gain	TCGA-AB-2804
4	152105591	152314706	116	2.656911181	gain	TCGA-AB-2804
5	46208133	49608899	90	2.744417555	gain	TCGA-AB-2804
5	56369702	56621984	156	2.507717788	gain	TCGA-AB-2804
5	90619508	90698365	57	2.566851795	gain	TCGA-AB-2804
5	132311958	132440638	59	2.708511094	gain	TCGA-AB-2804
5	134036560	134141378	40	2.88860913	gain	TCGA-AB-2804
5	170679896	170767853	46	2.562629657	gain	TCGA-AB-2804
5	176465740	176578041	62	2.828917296	gain	TCGA-AB-2804
6	6977315	7031432	54	2.731607121	gain	TCGA-AB-2804
6	37218148	37294907	57	2.783451606	gain	TCGA-AB-2804
6	111151743	111488728	223	2.594128599	gain	TCGA-AB-2804
6	150043984	150197305	67	2.763745939	gain	TCGA-AB-2804
8	37892700	38222256	136	2.565295462	gain	TCGA-AB-2804
9	19076978	19280143	189	2.740853087	gain	TCGA-AB-2804
9	133184182	133262244	59	2.792147197	gain	TCGA-AB-2804
21	23323040	46921385	26782	2.511196634	gain	TCGA-AB-2807
4	69134494	69234339	34	2.6323932	gain	TCGA-AB-2808
3	67945121	68808441	868	1.524937379	loss	TCGA-AB-2809
3	68831447	74382798	6547	1.539540692	loss	TCGA-AB-2809
12	34403011	34490594	32	1.582960219	loss	TCGA-AB-2811
14	19973007	20013344	53	2.525160344	gain	TCGA-AB-2811
16	19721620	19805990	37	1.619585913	loss	TCGA-AB-2811
16	28731427	28859425	48	2.652311091	gain	TCGA-AB-2811
19	4257834	4363206	36	2.878864726	gain	TCGA-AB-2811
19	63538957	63789666	165	2.526911259	gain	TCGA-AB-2811
X	153219801	153307316	102	2.646801496	gain	TCGA-AB-2811
7	44053081	44101419	31	2.575316952	gain	TCGA-AB-2811
13	36974299	37023187	92	0.948519935	loss	TCGA-AB-2812
2	20944405	20982464	39	2.577102644	gain	TCGA-AB-2812
X	106781262	106849261	43	2.681192865	gain	TCGA-AB-2812
5	84922598	84995558	30	1.475163638	loss	TCGA-AB-2812
6	7673426	7716777	39	1.623857868	loss	TCGA-AB-2812
6	73374768	73413063	33	2.651162314	gain	TCGA-AB-2812
8	16432795	16482198	48	1.484813896	loss	TCGA-AB-2818
8	21253	12738591	18873	2.550004866	gain	TCGA-AB-2822
8	12739800	25028104	16428	2.567296635	gain	TCGA-AB-2822
8	25040249	39349816	13573	2.582467154	gain	TCGA-AB-2822
8	39504350	125824931	74456	2.583586165	gain	TCGA-AB-2822
8	125833064	146268959	22071	2.576879365	gain	TCGA-AB-2822
1	5321463	5401174	38	1.633113432	loss	TCGA-AB-2824
7	39564146	40616109	780	1.513879105	loss	TCGA-AB-2825
1	72541005	72583721	47	2.760873908	gain	TCGA-AB-2826
11	3434810	3707736	182	1.490581232	loss	TCGA-AB-2827
X	45752721	45872338	56	0.815284222	loss	TCGA-AB-2827
22	20058119	20173935	33	2.588291309	gain	TCGA-AB-2830
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2830
3	163995432	164109297	72	2.648636755	gain	TCGA-AB-2830
14	21669208	22063560	583	1.555631119	loss	TCGA-AB-2831
7	38264846	38371496	172	1.531425303	loss	TCGA-AB-2831
11	116297360	116448564	124	1.448816619	loss	TCGA-AB-2832
X	108476	12085766	10734	1.42664363	loss	TCGA-AB-2832
X	12086496	84770891	52895	1.433458363	loss	TCGA-AB-2832
X	84775620	115585309	24088	1.440180861	loss	TCGA-AB-2832
X	115589224	154835548	34496	1.440929749	loss	TCGA-AB-2832
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2832
3	158380827	158433572	31	2.62419513	gain	TCGA-AB-2832
8	39354759	39506122	61	2.820351546	gain	TCGA-AB-2832
18	75426563	75487043	42	2.647718966	gain	TCGA-AB-2833
19	41909	2655947	944	2.586273771	gain	TCGA-AB-2833
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2839
9	44669746	44770235	41	2.849581391	gain	TCGA-AB-2842
20	24675484	54156282	26333	2.882109203	gain	TCGA-AB-2843
20	54159975	54489378	474	3.053576524	gain	TCGA-AB-2843
21	35189111	35234651	63	6.448103942	gain	TCGA-AB-2843
1	245886609	245934021	31	1.640203703	loss	TCGA-AB-2856
15	72018401	72105212	150	2.535464368	gain	TCGA-AB-2862
8	21253	4467497	7614	2.522317695	gain	TCGA-AB-2864
8	4471482	11047528	9787	2.511849454	gain	TCGA-AB-2864
8	11048235	16314377	6830	2.537222428	gain	TCGA-AB-2864
8	16327711	31952990	18415	2.536123498	gain	TCGA-AB-2864
8	31959206	35643974	3492	2.566407032	gain	TCGA-AB-2864
8	35648445	73985190	30732	2.558414464	gain	TCGA-AB-2864
8	73989252	112363470	33470	2.57442457	gain	TCGA-AB-2864
8	112369456	138865981	28563	2.562185626	gain	TCGA-AB-2864
21	46877265	46921385	45	2.532390696	gain	TCGA-AB-2865
20	62365612	62426597	35	2.678174566	gain	TCGA-AB-2866
8	146202004	146268959	50	2.668908786	gain	TCGA-AB-2866
12	34365648	34467977	44	1.580356455	loss	TCGA-AB-2869
1	246816182	246862475	30	2.708276429	gain	TCGA-AB-2871
3	163995350	164111308	74	2.510979064	gain	TCGA-AB-2871
4	34463349	34501120	39	2.596152265	gain	TCGA-AB-2871
4	69043082	69211554	74	2.603811482	gain	TCGA-AB-2871
7	38260625	38323600	123	1.552534147	loss	TCGA-AB-2871
Y	2675208	27065682	9017	NA	NA	TCGA-AB-2877
4	9066074	9189110	43	2.526692328	gain	TCGA-AB-2879
1	178473826	178511357	67	1.635520678	loss	TCGA-AB-2884
16	776	50870	33	1.641341	loss	TCGA-AB-2896
19	63749894	63789666	30	1.573524891	loss	TCGA-AB-2896
7	75318018	75415687	38	1.616081549	loss	TCGA-AB-2896
13	89038022	91040351	2019	5.376808166	gain	TCGA-AB-2898
13	91040350	92338658	1334	2.5343662	gain	TCGA-AB-2898
8	144385751	146268959	878	2.53261012	gain	TCGA-AB-2898
12	8497095	13344216	5017	1.479900315	loss	TCGA-AB-2899
13	114054006	114126499	47	3.043011951	gain	TCGA-AB-2899
21	13484871	46909248	37146	1.46980524	loss	TCGA-AB-2899
1	117898409	117934753	32	1.300665515	loss	TCGA-AB-2907
1	152985401	153061521	118	1.622816639	loss	TCGA-AB-2907
1	177451553	177489463	47	2.546692902	gain	TCGA-AB-2907
11	119427944	119474240	81	1.638357277	loss	TCGA-AB-2907
12	69792	120500	46	1.499259381	loss	TCGA-AB-2907
15	22847232	22886561	59	1.21261788	loss	TCGA-AB-2907
15	22967806	23057672	92	1.31494276	loss	TCGA-AB-2907
15	38436040	38473142	30	1.379241414	loss	TCGA-AB-2907
15	72259159	72342150	60	1.557654211	loss	TCGA-AB-2907
15	99497287	99533043	49	2.755855034	gain	TCGA-AB-2907
16	53072895	53109366	45	1.451329403	loss	TCGA-AB-2907
16	53504787	53556867	30	2.686308508	gain	TCGA-AB-2907
16	85803145	85843690	49	1.617062006	loss	TCGA-AB-2907
17	75710680	75752791	36	2.550446786	gain	TCGA-AB-2907
2	224372293	224434511	52	2.608779483	gain	TCGA-AB-2907
20	24927441	24967099	49	1.554687909	loss	TCGA-AB-2907
20	51024683	51065311	48	2.571749278	gain	TCGA-AB-2907
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4	91590438	91660845	32	1.610629876	loss	TCGA-AB-2907
5	73656808	73695071	40	2.584705661	gain	TCGA-AB-2907
5	178984143	179029086	55	2.856007959	gain	TCGA-AB-2907
6	162882249	162929008	44	2.531513188	gain	TCGA-AB-2907
7	52910	157726	33	1.646611264	loss	TCGA-AB-2907
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9	136300630	136341480	30	1.540074348	loss	TCGA-AB-2907
1	72543954	72583721	42	1.232104823	loss	TCGA-AB-2909
12	34402049	34467977	30	1.320422841	loss	TCGA-AB-2909
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4	69021056	69406991	82	1.429117958	loss	TCGA-AB-2909
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15	38430670	38473142	38	1.519793171	loss	TCGA-AB-2916
2	11493863	11545926	36	2.5343662	gain	TCGA-AB-2916
Y	26234016	26306625	30	NA	NA	TCGA-AB-2916
7	63710460	63748028	38	1.467641902	loss	TCGA-AB-2916
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11	54530468	54767720	45	2.975227525	gain	TCGA-AB-2919
19	24313462	32773227	67	2.570189975	gain	TCGA-AB-2919
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4	105418639	105500713	47	2.516641994	gain	TCGA-AB-2919
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12	34353037	34450576	52	1.421707818	loss	TCGA-AB-2921
18	9543763	13597231	4465	1.424667252	loss	TCGA-AB-2921
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7	38277247	38364572	161	1.481696534	loss	TCGA-AB-2922
1	104236800	104274174	38	1.573524891	loss	TCGA-AB-2923
11	94704373	96803400	2437	2.554648852	gain	TCGA-AB-2923
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7	110214034	141409593	27788	1.380795818	loss	TCGA-AB-2923
7	141434367	158819765	16935	1.397041619	loss	TCGA-AB-2923
1	85114490	85157112	61	1.629862207	loss	TCGA-AB-2926
15	22847232	22886561	59	1.434700898	loss	TCGA-AB-2926
17	41072667	41115502	46	1.555092072	loss	TCGA-AB-2926
22	39898157	39933600	45	1.498739867	loss	TCGA-AB-2926
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7	44424608	44468034	35	1.507596133	loss	TCGA-AB-2926
7	139546853	139596215	42	1.544751742	loss	TCGA-AB-2926
8	1907732	2284134	606	2.524066639	gain	TCGA-AB-2926
8	25373607	25419765	39	2.509239189	gain	TCGA-AB-2926
8	32624668	33385531	750	2.50902179	gain	TCGA-AB-2926
8	34450798	35452539	804	2.501207936	gain	TCGA-AB-2926
8	35458648	35497128	38	2.555755809	gain	TCGA-AB-2926
8	52830155	53387926	573	2.504026794	gain	TCGA-AB-2926
8	124947812	124985112	52	2.584033906	gain	TCGA-AB-2926
18	26644716	26690582	34	1.571345033	loss	TCGA-AB-2927
1	110525221	110568871	33	1.640203703	loss	TCGA-AB-2933
12	34326242	34553374	86	1.630568444	loss	TCGA-AB-2933
15	22830954	22879808	64	1.564145802	loss	TCGA-AB-2933
15	22967806	23057672	92	1.51768775	loss	TCGA-AB-2933
17	525	3416603	2664	1.657346205	loss	TCGA-AB-2933
17	4371165	5793765	1206	1.653043855	loss	TCGA-AB-2933
17	5818829	9025138	2890	1.621832693	loss	TCGA-AB-2933
17	9032100	12954307	4572	1.620428091	loss	TCGA-AB-2933
17	12960726	14508276	2006	1.636654728	loss	TCGA-AB-2933
17	14515083	14873021	521	1.603945365	loss	TCGA-AB-2933
17	14875117	15278731	479	1.62577206	loss	TCGA-AB-2933
17	15280519	16781931	929	1.643902802	loss	TCGA-AB-2933
17	16958353	17120206	140	1.573035465	loss	TCGA-AB-2933
17	18438027	18708648	104	1.629438611	loss	TCGA-AB-2933
17	18715537	18991651	132	1.623519823	loss	TCGA-AB-2933
5	149069026	149111561	31	2.689568998	gain	TCGA-AB-2933
8	82377495	82419615	40	2.569076766	gain	TCGA-AB-2933
4	48849374	49351352	36	2.596827171	gain	TCGA-AB-2934
1	14322357	15402916	1403	1.610490332	loss	TCGA-AB-2938
1	72541085	72578396	37	2.551994111	gain	TCGA-AB-2938
17	525	7207200	6136	1.620287697	loss	TCGA-AB-2938
17	7210078	10265705	3047	3.051725079	gain	TCGA-AB-2938
17	14568033	17272444	2324	1.624927105	loss	TCGA-AB-2938
19	41909	2874263	1099	1.655193632	loss	TCGA-AB-2938
19	2948896	3991593	420	1.620147316	loss	TCGA-AB-2938
19	4014066	5558688	825	3.562154275	gain	TCGA-AB-2938
19	5565312	6550004	622	1.654620085	loss	TCGA-AB-2938
19	6551802	11599882	3501	3.26028933	gain	TCGA-AB-2938
19	11600579	16028789	3322	2.673537662	gain	TCGA-AB-2938
19	16030927	21442676	3641	2.796989814	gain	TCGA-AB-2938
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21	27311367	27998583	857	2.678870795	gain	TCGA-AB-2938
21	36935975	46846083	11356	3.420897791	gain	TCGA-AB-2938
21	46847677	46921385	85	3.484314863	gain	TCGA-AB-2938
4	69043082	69139217	49	2.728768488	gain	TCGA-AB-2938
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11	31894506	31944654	51	1.625208708	loss	TCGA-AB-2955
11	127938528	127983128	42	1.65662837	loss	TCGA-AB-2955
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15	38430997	38477676	37	1.542210825	loss	TCGA-AB-2955
18	1041454	1086439	45	1.567537547	loss	TCGA-AB-2955
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20	100192	137732	38	1.457377881	loss	TCGA-AB-2955
X	117890356	117934900	53	1.63000343	loss	TCGA-AB-2955
4	188168604	188203606	31	1.644330157	loss	TCGA-AB-2955
6	166980005	167015841	36	2.503376007	gain	TCGA-AB-2955
7	63710460	63748028	38	1.512174886	loss	TCGA-AB-2955
9	136300630	136344934	32	1.613143744	loss	TCGA-AB-2955
1	118097447	118156214	45	2.558636143	gain	TCGA-AB-2959
11	117820795	117856311	86	3.008146855	gain	TCGA-AB-2964
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2964
4	69102617	69166644	42	2.711563583	gain	TCGA-AB-2964
1	72543730	72591367	53	2.583810026	gain	TCGA-AB-2966
2	24395064	25807518	1020	1.369239674	loss	TCGA-AB-2966
2	34554897	34590667	48	2.654380145	gain	TCGA-AB-2966
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2966
4	69057754	69406991	74	2.561741671	gain	TCGA-AB-2966
8	39349481	39503857	60	2.777188303	gain	TCGA-AB-2966
2	125549504	125625622	37	1.627181295	loss	TCGA-AB-2967
1	33220933	33258662	30	2.513155605	gain	TCGA-AB-2968
11	117148980	117202168	69	1.576253965	loss	TCGA-AB-2968
12	34403011	34469078	30	1.255054488	loss	TCGA-AB-2968
15	22967806	23057672	92	1.484137748	loss	TCGA-AB-2968
2	121511479	121547883	42	1.501729531	loss	TCGA-AB-2968
5	135138225	135196684	40	1.540074348	loss	TCGA-AB-2968
1	72541005	72583736	48	2.910465669	gain	TCGA-AB-2971
Y	2675208	22043403	7735	NA	NA	TCGA-AB-2971
Y	22058043	57427647	1355	NA	NA	TCGA-AB-2971
5	135123358	135188273	33	1.575434746	loss	TCGA-AB-2971
9	81151141	87703853	7122	1.436566721	loss	TCGA-AB-2971
2	34555174	34590667	45	2.723807977	gain	TCGA-AB-2972
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2972
11	117140654	117202168	76	1.568080908	loss	TCGA-AB-2973
15	85610384	85647660	36	2.687705376	gain	TCGA-AB-2973
X	36650878	36706556	41	1.561302409	loss	TCGA-AB-2973
8	143216841	143268298	41	1.481054777	loss	TCGA-AB-2973
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3	163995350	164106591	69	1.17772279	loss	TCGA-AB-2974
6	79025783	79091904	122	1.211462712	loss	TCGA-AB-2974
18	36147591	36183286	41	1.628732864	loss	TCGA-AB-2975
20	217689	281463	63	1.524805259	loss	TCGA-AB-2975
8	27517011	27564462	57	1.600474843	loss	TCGA-AB-2975
8	122647546	122690349	32	2.584705661	gain	TCGA-AB-2975
8	34404169	34439282	30	1.560085394	loss	TCGA-AB-2976
1	91886170	91923919	40	1.599504443	loss	TCGA-AB-2977
16	9009888	9069715	36	2.56796404	gain	TCGA-AB-2977
15	22847232	22883811	57	1.393173561	loss	TCGA-AB-2981
21	36750909	36787209	31	1.521505976	loss	TCGA-AB-2981
4	2280	55978	65	1.615101687	loss	TCGA-AB-2983
1	72532111	72582430	48	2.687705376	gain	TCGA-AB-2986
6	32590946	32682038	30	2.707572558	gain	TCGA-AB-2986
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7	63710460	63748028	37	1.565230361	loss	TCGA-AB-2987
14	30071862	30122945	30	1.602695111	loss	TCGA-AB-2989
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7	38261520	38318685	114	1.605474777	loss	TCGA-AB-2992
5	46245055	49494811	49	1.545153321	loss	TCGA-AB-2996
5	104212328	104248818	39	1.54488559	loss	TCGA-AB-2996
10	21878385	22027081	63	1.31277985	loss	TCGA-AB-3005
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9	44569218	44764259	40	2.552878718	gain	TCGA-AB-3006
1	196644840	196684402	31	1.637505781	loss	TCGA-AB-3008
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13	114082643	114126499	30	2.649325305	gain	TCGA-AB-3009
16	3785705	3848456	61	3.23356363	gain	TCGA-AB-3009
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7	52910	35193822	38793	1.263565104	loss	TCGA-AB-2806
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12	46403631	49109203	1978	1.40907656	loss	TCGA-AB-2828
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16	15725641	16159238	477	1.285763231	loss	TCGA-AB-2846
5	68531	174704	57	2.530197497	gain	TCGA-AB-2846
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12	34359791	34467977	47	1.528244103	loss	TCGA-AB-2870
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1	72541005	72583721	47	2.755855034	gain	TCGA-AB-2892
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6	32556576	32681992	43	2.597052178	gain	TCGA-AB-2892
19	616895	1987590	457	1.58090426	loss	TCGA-AB-2897
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1	233713195	233760040	36	2.728532069	gain	TCGA-AB-2998
Y	2675208	57427647	9097	NA	NA	TCGA-AB-2998
Y	2675208	57427647	9097	NA	NA	TCGA-AB-3001
14	106303011	106356482	39	2.544046429	gain	TCGA-AB-3007
18	30322987	30371074	32	1.539807497	loss	TCGA-AB-3007
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8	146224698	146268959	32	3.235245069	gain	TCGA-AB-3007
1	246932179	247191011	152	2.513591139	gain	TCGA-AB-2810
10	62758	238506	101	2.528882489	gain	TCGA-AB-2810
12	132177176	132288262	71	2.581572295	gain	TCGA-AB-2810
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3	35344	480030	724	2.533707527	gain	TCGA-AB-2810
4	2280	145365	141	2.618063337	gain	TCGA-AB-2810
5	68531	259016	143	2.603360315	gain	TCGA-AB-2810
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16	59744501	66955893	6607	1.489935627	loss	TCGA-AB-2829
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18	80579	17170389	16630	1.566179967	loss	TCGA-AB-2829
18	31319286	31890064	482	1.521769655	loss	TCGA-AB-2829
20	178759	232834	59	2.546913566	gain	TCGA-AB-2829
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21	9758741	46921385	37339	2.502508553	gain	TCGA-AB-2829
4	70183465	70264023	40	0.968869995	loss	TCGA-AB-2829
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